Etheostoma cragini (Arkansas darter): 117958090
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Entry
117958090 CDS
T07493
Symbol
abca3b
Name
(RefSeq) ATP-binding cassette sub-family A member 3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117958090 (abca3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecra02000
]
117958090 (abca3b)
Transporters [BR:
ecra02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117958090 (abca3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_15
AAA_22
RsgA_GTPase
SRP54
AAA_29
AAA_30
AAA_25
Motif
Other DBs
NCBI-GeneID:
117958090
NCBI-ProteinID:
XP_034750240
LinkDB
All DBs
Position
15:9561351..9590632
Genome browser
AA seq
1708 aa
AA seq
DB search
MAIARQFGLLVWKNYLQQKRQILVTLVEILLPLLFSGILIVLRQKVPFKDYPNATIYESY
AVDMLPGRLSHRLQLAYVPGNSSVVRQVAQDVRESLALSSVRGFETEELFEDYVRNDPLS
GKLLAAVVFEHPFTHDDEPLPLKVSYHLRFSFTPRNAPPKERSELNPNSDLDWHTLSLYP
LFQLPGPREQYDKEGGTPGYFREGFLAVQHAVDLAIMRSYNRTSAASLLGHIRVVLSRFP
YPAFIYDVFILAIQNQLPLLLVLSFTYTSLNIVRSVVQEKERKLKEYMRMMGLSNWLHWS
AWFLMFFLFLSISIFFVTLLLCIQVSPNGAVLTYSDPTLVFVFLLVFTVATINFSFMISA
FFSQANVAAAAGGFIYFLSYLPYLFLWPRYDLLSHAQKVSACLISNVAMAMGAQLIGMFE
GKGMGIQWSNLFDSVTVDDDFSLAQVLGLLLFDSVLYGLVAWYMEAVFPGEYGVPLPSYF
FVLPSYWCSSPRMALVNEKEEEEDAEKALKGEFIEEEPAGLVSGVKIKHLAKEFKVGNKT
RQAVRDLTMNMFEGQITVLLGHNGAGKTTTLSMLTGLFPPTSGRAYINGYDICQDMALIR
RSLGLCPQHDVLFDNLTVREHLLFYAQLKGFSKEKIPDEVDRTIRILNLEDKRQARSKTL
SGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKRDRTILLTTHFMDE
ADLLGDRIAIMAGGELQCSGSPLFLKNKYGAGYHMVIVKDALCNVSEITRLVHMYVPNAT
LESSAGAELAYILPKESTSRFELLFAELEMNREELGIASYGASVTTMEEVFLRVGKLVDS
SLDIQAIQLPALQYQHERRSHDWTTDDASSSSGMTDVTDFTDSGTLISEDCSNIKLNTGA
RLHLQQFYAMFLKRALYSWRNWKVMVAQFLVPLVFTVLALVVARTIPNHQDAPQLRLALS
RYGSTRVPVALPPAVGPLASALANTYSSQLSAQLGQLINITDFTDFILTQAEEEGGSFNE
RCVVGAAFRGSSSRFAEATAYFNNEGYHTPATSLMLMDNALFKLLAGPNASIQTGNYPMP
RNLSEIAHSQLNEGKTGFIIAINLMYGMASLSSTFALLLVTESSIKSKHVQQVSGVYLSN
FWFSALLWDLVNFLLPCLLMLVVFQAFGIKAFVDNNHLVDVLLLLLLYGWAVVPLMYLLS
FFFSTAATAYTRLTIFNMISGTATFLTVTIMTIPELNLKDLSHLLDKVFLIFPNYCLGMS
FSQFYQNYEFISFCTSSPISETVCNYLNITYQKNYFSMSEPGVGRFLVAFSLQGVVFIIL
LFVIELQCVRTLRRFLTSLGRRRKQLPLIEDTALLPEDRDVAEERKRVLECQPILESMVG
SPLILQELSKVYSSGESLLAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDESVTSG
DAYIDGYSILRDIKKVQQRIGYCPQFDAVLDHMTGRETLSMYARLRGIPEKYVSGCVENV
LRSLLLEPHADKLIRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAVT
RTRESGKAIIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKIHTE
AELEDTELQLFKDFIESTFPGSQLKDEHQGMVHYHLTDKTLTWAQVFGTLEAAKEKYQIE
DYCVSQISLEQVFLSFAQFQHCKESRRK
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggccattgcgcgacaatttggacttctggtgtggaaaaactatcttcagcagaaacgt
caaatcctggtaactctggtggagatactcctgcccctgctcttctccggcatcctcatc
gtgctacgtcagaaggtgccttttaaggactacccaaatgccaccatctatgagagctac
gccgttgacatgctacccggtagattgtcgcaccgcttgcagctggcttatgtgcccggt
aactccagtgtggtgcgtcaggtggcccaggatgtgcgagagagcctggctctctcttca
gtgcgtggctttgagacagaggagctgtttgaggactatgtgagaaatgaccccctgtca
ggaaagctgctggctgctgtggtgtttgagcaccccttcacccacgatgatgaacctctg
ccactaaaggtgagttaccacctgcgtttcagtttcacaccacgcaatgccccacccaag
gagaggtcggagctgaaccccaacagtgacctggactggcacacactcagcctctatccc
ctctttcaactgccagggccgagggagcagtatgacaaggaagggggcacgcctggctat
ttccgagagggattccttgctgtacagcatgcagtggacctagccatcatgcgctcttac
aacagaacgtctgctgcctctttgttgggacatatcagagtggtcctgtcccgttttcct
taccctgccttcatatacgacgtcttcatcctagccattcagaaccaactgcccctatta
ctggtgctcagttttacctacacctccctcaacatagtacgatctgtggtacaggagaag
gaaaggaagctcaaggagtacatgaggatgatgggtctcagcaactggctccactggagt
gcctggttcctcatgttctttctcttcctctccatttcaatattttttgtcactctgctc
ctttgtatccaggtgagccctaacggagcagtgctgacctacagcgaccccacgctcgtc
tttgtcttcctgctcgtcttcactgtggccaccatcaacttcagcttcatgatcagtgcc
ttcttctcacaagcaaatgtggcagcagcagcaggcggcttcatctatttcctgagctac
ctgccttatttgttcctgtggccacgctatgacctgcttagccatgcccagaaggtgtca
gcctgcctcatctctaatgtggccatggccatgggagctcagctcataggaatgtttgaa
ggcaaaggaatgggaatccagtggtcaaacttgtttgactctgtgacggtggatgatgac
ttctctctggcccaggtgttaggcttgctgctgttcgactctgtactctatggcttggtg
gcctggtacatggaggctgtttttcctggcgagtacggagtgcctctaccatcttacttc
tttgtactgccttcatactggtgcagcagtccccgcatggctttggtgaatgagaaagag
gaagaggaggatgcagaaaaggctttgaaaggggagttcatagaggaggagccagctgga
ctagtctccggggtaaagattaaacaccttgctaaggaattcaaagtaggcaacaagaca
cggcaggctgtgcgggatctcacaatgaacatgtttgagggacaaatcacggtgctgcta
ggacacaacggtgctgggaagacaacaacattgtccatgctgacagggctgtttcctccc
accagtggcagggcctatatcaacggttacgacatctgtcaggacatggctctgatccgc
cgcagtctgggactctgtccccagcacgatgtactgtttgataaccttactgtcagagag
cacctgctcttctacgctcagctgaaaggcttctccaaagagaagattccagatgaggta
gacaggactatccgtatcctgaaccttgaggacaagcgacaggctcgctccaagaccctc
tctgggggcatgaagaggaaactctccattggcattgccctcattggagactccaaggtg
gtgatgttagatgagccaacatcaggtatggacccatcggctcgacgtgccacctgggac
cttctgcaaggggagaagcgcgatcgcaccatcctgctcaccacgcactttatggatgag
gccgacctgctcggtgaccgcattgccatcatggcaggaggagagctgcagtgcagcggg
tcaccactctttcttaagaacaaatatggtgctggttaccacatggtaatagtaaaggat
gctctttgtaatgtgtccgagatcacccgccttgtccacatgtatgttcctaatgccaca
ctggagagcagcgcgggggcagagcttgcttacatcttgcccaaagaaagcaccagcagg
tttgagctgctgtttgctgagctggagatgaacagggaggagctgggcatcgccagctac
ggagcttcagtaacaactatggaagaggttttcctcagggtcggaaagttggtggattca
agtttggacatccaggcaatccagcttccagccctgcagtatcaacatgagagacgctcc
catgactggaccacagacgacgccagcagcagcagcggcatgaccgatgtcactgacttc
acagacagcggcacgctcatttcagaggactgctccaacatcaagctaaacactggggcc
aggctacacctacaacagttttatgccatgttcctgaagagggccctgtacagctggaga
aactggaaggtgatggtggctcagttcctggtccctttggttttcactgttttggcttta
gttgtggcacgcaccattcccaatcaccaggatgctcctcagctgaggctggcactcagc
cgctatggttccaccagggtccctgtggctctgccgcctgccgtaggtcccctggcctct
gccctggcaaatacatacagttcacagctctctgcccagcttggccagcttatcaatatc
acagacttcactgatttcatcctgacccaggcagaggaagaaggcggcagctttaatgag
cgctgtgtggtgggtgctgctttccgcggcagcagcagccgatttgcagaagcaacagca
tacttcaataacgagggctaccatacacccgccacatccctaatgttgatggacaacgct
ttgttcaaacttctagcaggtccgaatgcatccatccagacgggcaattaccccatgcca
cgcaacctgtctgagatcgcccacagccagctcaacgagggaaagacaggcttcatcatc
gccatcaacctgatgtacggcatggcctccctgtctagcacatttgccctcctgctcgta
acagagtcctctatcaagtctaaacatgtgcagcaggtcagcggtgtctacctttcaaac
ttctggttttctgccttgctgtgggacctggtcaatttcctgctgccctgtctcctcatg
ctggtggtgtttcaggcatttggaatcaaggcttttgtagacaacaaccacttggtggat
gtgttgttgttactgctgctgtatggctgggctgttgtgcctcttatgtacctgctcagc
ttcttcttttccactgccgctactgcctacacacgcctcaccatcttcaacatgatctct
ggcacggccacctttctgactgtcaccatcatgaccatcccagagttgaatctgaaggac
ctgtcgcacttgctggataaagtgttcctgatctttccaaactattgtctgggcatgtcc
ttcagccagttctaccagaactacgaattcatctcgttttgcacttccagtccaatcagc
gagaccgtgtgcaactacttaaacatcacgtaccagaaaaactacttttcgatgtcggag
cctggtgtgggacgcttcctcgtggccttctccttgcagggtgttgtctttattattttg
ctgtttgtcatcgagctgcagtgtgtccgcactctccggcgattccttacctctctgggc
agaagacggaaacagttacctcttatagaggatacagcactgcttccagaggacagggac
gtggcagaagagagaaaaagggtcctggagtgccagccaatattagagtctatggttggc
agccccctcatactacaggagctcagcaaggtgtacagcagcggggagagtcttctggct
gtggacaggctgtctctagctgtagggaaaggggagtgttttgggctcctaggctttaat
ggagcaggcaagacaacaacctttaagatgctgactggtgatgagagcgttacctccggg
gatgcctacatcgatggatacagcatcttgagggacattaaaaaggtgcagcagcgcatt
ggttactgccctcagtttgatgccgtgttggaccacatgacaggaagagaaactctgagt
atgtatgccaggctcagaggaataccagagaagtatgtgtctggctgtgtggagaatgtc
ttgcggtcgctgctgctggagcctcatgccgataaactgatccgcagctacagtggcggt
aacaagcggaagctgagtgcaggcatggctctgatcggtgggcctccggtcatctttctg
gatgagccttcgaccgggatggaccctgtggccaggaggctgctatgggatgctgtaaca
cgcacacgggagtctggaaaggccataatcatcacttctcatagtatggaggagtgtgag
gccctgtgtaccaggctggcagtgatggtcaacggtcagttcaagtgcctcgggagtccc
caacacctgaagagcaagtttggcagtggctacaccctgctggcaaaaatacacacagag
gctgagttggaagacactgaactgcagctttttaaagacttcatcgaaagtaccttccca
ggaagtcaactaaaggatgagcaccagggaatggtgcactatcatttgactgacaaaaca
cttacctgggcacaggtgtttggcactttggaggcagccaaagagaaataccagattgaa
gactactgtgtgagccagatatcactggagcaggtgtttcttagctttgcccagttccag
cactgcaaggagagtaggagaaagtaa
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integrated database retrieval system
