Etheostoma cragini (Arkansas darter): 117958100
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Entry
117958100 CDS
T07493
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03013
Nucleocytoplasmic transport
ecra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117958100
03015 mRNA surveillance pathway
117958100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117958100
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117958100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_ACIN1
RRM_7
RRM_occluded
RRM_3
RRM_5
RRM_MUD2_C
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
117958100
NCBI-ProteinID:
XP_034750252
LinkDB
All DBs
Position
15:9614795..9617553
Genome browser
AA seq
280 aa
AA seq
DB search
MAPSPTKRKEEEKTKDRGKEKTTTKEGDKERGREKARKRRSASTGSSSSRSRSSSSSSSS
SGSSSGSSSGSSSSGSSRSGSSSSRSSSSSSSSGSPSPSRRRHDNRRRSRSASKTQKRGD
DKERRKRSPSPKPTKVHLGRLTRNVTKDHIQEIFSTYGKIKMVEMPMDRVHPHLSRGYAY
VEFETPEEAQKALKHMDGGQIDGQEIAASAVLTQRIRPPPRRPSPPRRMPPPPPMWRRSP
PRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgtcacccacaaagcggaaggaggaggaaaaaactaaagacagaggcaaagaa
aagactaccacaaaggaaggagacaaggagagagggagggagaaagcaaggaaacgtcgc
agtgcctccactggcagcagcagcagcaggtctagatctagctcttcttcaagcagcagc
tctggttccagctcaggttcctcaagtggatccagctcatctggctccagccgctctggt
tcttcaagctctcgttcgtcctcctcttccagctcctcaggctcccctagccccagccgt
agacgccatgacaaccgccgccgctcccgctcagcgtccaaaacacaaaagaggggagat
gacaaggagcgaaggaaaagaagtccgagccccaaaccaactaaagttcacttagggcgg
ctgactaggaatgttaccaaggaccacatccaggagatcttttccacatatggaaaaatc
aaaatggtcgaaatgccaatggacagggtccacccacacctttccaggggctatgcttat
gtggagtttgagactcctgaggaggcccagaaggccctcaaacacatggatggaggtcag
attgatggacaagaaatcgcagcatctgccgtgctgactcaacgaatccgccctccacct
cgtagaccttctccccctcgcagaatgcccccaccaccacctatgtggcgtcgcagtcca
ccacgcatgaggagaaggtcccgctccccgaggaggcggtccccagtacgccgccgctct
cgctcgagatctcctggtcgcaggcgtcaccgctctcgttccagctctaactcctccaga
tag
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