Etheostoma cragini (Arkansas darter): 117958148
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Entry
117958148 CDS
T07493
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein-like
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117958148
03036 Chromosome and associated proteins [BR:
ecra03036
]
117958148
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117958148
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Gene silencing
piRNA pathway
117958148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
THOC7
UBA_NBR1_C
Motif
Other DBs
NCBI-GeneID:
117958148
NCBI-ProteinID:
XP_034750306
LinkDB
All DBs
Position
15:complement(7476921..7513608)
Genome browser
AA seq
1652 aa
AA seq
DB search
MEDKKKKKQEEKKKKEAAQKRATEQITKVPESAKLDPIPLPPINPSAVPSVPPSSGNGKR
ALSGCQPQTAQQPQTLLQQRYPPREVPPRFRQQEQKQLLKRGQPLPSGTLSLTTTGRPAT
TEPAAPVAIHSSPSCSSSSTASLPTDLSLQSGQQAQHDNTLWGHLPANRSATSAGSSTNL
SGWDQLIIDQKNTEAWPSITLSQSQAHPGGCPLDTDPGHLTSSSSSSSTSSSCSTVSMAT
GANSQTGHFPTNHLSNKANSGPSPANHTGASMLNSQANRSWGSGPGTSHCPPQSSVGTEG
KNDSPVGGGGSRGWGVSSSSTTNFNLNLNPNANPSAWPMLGHDGGGTGGGSSGGASTNSP
PQPTPNLCNPPGPPPAQTSTCTGANTNSNSSGIGTAWGNIMASDTSEPHRSPAMNGSFSS
EPQNLKTDGPNHTNKQEPPSPIRNLSGWGSSPVGLGSMGQTPPGGPQVNGEDGSSVWGNG
GNSKASSSKDAPGWDSGWGLGGGGAGNSGSWGDQTGGNWGKQHTEEAQGGWDAPTSPPQE
TQASLWSRAVNKAGASEGSNDSMEGHPQQIDSSSRDNPAPLMPAQDLDPRVLCNTGWGQT
PVRQHTSWDMENTKHKNDAAAESWGSGPTTPSDAQGPSNNNMVPSQRTDPGSKNDVPGSQ
GSSGWGGSIAANNQPSSGWGEPTNNIKPPGGPGSWANPPTGGSTTSIPKNGGQSWGEEKA
TGWDDSRNKVTSQSWGEQPKASRSWGNSGGSNNAGDWREPEESKKSPTNPGWEGEAGGWK
ENPRGWGMSPSGPGIPAAGGNGGWGEPVSQRPSGPPQGWAGKPQDGPSGSSGGGSIGSWI
GSGSVKQGGNWSGSKESSAEPTGWEEPSPPSIRRKMEIDDGTSAWGDPVTYSKSVNLWDR
NNPGMTQAKVTTGGNNPPGPNTTNNNNHPHSHNHPYHGPPAPLQNHTQNSQNPGPTSGPM
DPVVQHQSGPSHNRGPLIAQGWGEIPSSHTKSESSWGEAAPAPVSVDNGTSAWSKSTGSW
GDSDSYGRGNPTVTSASCKPAPKPMQDGWGGGGEELNLSGGQWDAEEGDMWNNAASQESN
SSCNSWGNASKKGPQKLSQGKVPGKQEDAWIMNRLIKQLTDMGFPRDPAEEALKSNNMSL
DQAMSALLEKKTEMDKRGMGIAGHDYNNGLINKPISCPRPPLLSKDPLSDPRLPFMDKQM
QSGMFGSGGAVQARAMQHPQPPPHPSVPPLSSSQPSLRAQVPQFLSPQVQAQLLQFAAKN
IGLNPALLTSPINPQHMTLLNQLYQLQLAYQRLQIQQQMLQAQRNVSGPIRQQEQQVART
INNMQQQIQQHQRQLAQALLMKQQQQQPPPSHSGLHHGGSKSTLDSFPGHPQAHGLPDLQ
TKEPQPSPNTYSPYSLSGLNPNMNVNCMEVGNLSMKEPPQPQSRLSQWTHPNSMESLSES
SSPLEPNLGKHGANLGLSGKPPQLEDSYSPYNMMSSSESPTSPLVTPDSWGQGKSSNDKM
ANGTNINWPPEFCPGVPWKGLQNIDPETDPNVTPGSVPSGPTINTNIQDVNRYLLRDRSG
GSSPTSSQNEALPPSTDWPVSAYTSSFSLSSPETDDAGKLSEMKSTWSPGPISHNQGSLS
HELWKVPQGPRSKHNDPLGSRKDRQILRGQTI
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atggaagataagaaaaagaaaaagcaagaagagaagaaaaagaaagaagctgctcagaaa
agggccacagaacagataaccaaagtgccagaatctgccaagctcgaccccatccctctt
cccccaatcaaccccagtgccgtcccatctgtaccccctagcagtggcaatggcaagcgc
gccctctctggatgtcagccgcagacagcacagcagccccagactctgctccagcagcgc
tacccgccaagagaggtgccccctcgcttccgtcagcaggagcaaaaacagctgttgaag
aggggccagcctttgccctccgggactctgtctctcaccacaacgggacgtcccgctact
actgaacctgcagcaccagtagccatacactcctctccctcctgctcctcctcctccaca
gccagcctgcctacagatctgtctctacagagtggccagcaagcccagcatgataatacc
ctttggggacacctgccagccaacaggagtgccacaagtgctggatcttcaaccaatctc
agtggctgggatcaactgatcattgaccagaagaacacagaggcttggccttctattacc
ctcagccagagccaggcccatccaggaggatgccctttggacactgaccctggtcacctg
accagcagcagcagcagcagtagtactagtagtagctgtagtacagtgagtatggccaca
ggggccaatagccagacaggccattttcctaccaaccaccttagcaacaaggccaacagt
gggcccagccctgccaatcatactggagccagcatgctcaatagccaggccaatcgcagc
tggggctctgggcctggaacctcccattgcccccctcagtcctcagtagggactgaaggg
aagaatgacagcccagtggggggaggaggcagcaggggctggggggtgtcatcatcctcg
actaccaactttaacttgaacctaaaccctaatgccaacccttctgcctggcccatgtta
gggcatgatggtggtggcacagggggaggcagctcagggggagccagcaccaattcacct
cctcaacctacaccgaacctctgtaatccgcctggccccccaccagcccagaccagtaca
tgtactggagccaacactaacagcaactcctctgggattggcaccgcctggggtaacata
atggcctctgacacatcagagccacaccgctccccagctatgaatgggtctttcagttca
gaacctcagaaccttaaaactgatggaccaaatcacactaataagcaggaaccccccagc
cccatccgcaacttgtctggctggggtagttcacctgtaggcctgggttccatgggccag
acccctccaggtggcccacaggtcaatggagaagatgggagctcagtatggggtaatggt
ggcaactcaaaggcatcttcatctaaggacgccccgggttgggactctggctggggcctt
ggaggaggtggagcaggaaattctggaagctggggtgaccagactggtggaaactggggg
aagcagcacacagaggaggcccagggaggctgggatgcccccacctctcctccccaggaa
acacaagccagtctttggagcagagctgtgaacaaagctggtgctagtgaagggagcaat
gacagcatggaaggacatccccagcaaatagactcctcatccagagataatccagctcct
ctgatgcctgcccaggatctggaccccagggtgttgtgtaacactggctggggacagact
cctgttcgccagcacacctcctgggacatggaaaatactaaacacaagaatgatgcagct
gctgaatcatggggctctggcccaaccactccaagcgatgcccaagggccctccaacaat
aacatggtcccctctcagaggactgaccctgggagcaaaaatgatgtgcctggttctcag
ggatcttcaggttggggtggaagcatagctgctaacaaccagcctagctctggttgggga
gaaccaaccaacaacattaagcccccaggtggccctggtagctgggctaatcctccaaca
ggaggttccaccaccagtatacccaagaatgggggtcaatcctggggagaggagaaggca
actgggtgggatgattctcgcaacaaggtcacatcccagagctggggagagcaacccaag
gcgtcccgcagctggggcaatagtggagggagcaataatgcaggggactggagagaacca
gaagagagcaaaaagagtcccaccaacccaggttgggagggagaagcaggaggctggaag
gaaaacccacgaggctggggaatgtctccttcaggacctgggatacctgcagctggtgga
aatgggggctggggagagccagtgagtcagcgtcccagtggccctccccaaggttgggcg
gggaagccccaggatgggcccagtggtagtagtgggggagggagcataggctcttggatc
ggatcaggctcagtgaagcagggtggaaactggagtggcagtaaggagtcctcagctgag
cctacaggctgggaagagccctccccaccttcaatccgacgaaagatggagatagatgat
gggacctcagcttggggtgaccctgttacctacagcaagtcagtcaacctgtgggacagg
aacaatccaggaatgacccaggctaaagttaccactggaggcaataatcccccaggcccc
aacaccaccaacaacaacaaccatcctcactctcacaatcacccctatcacggaccgcct
gcacctttacagaaccacacccaaaactcccaaaacccagggcccaccagtgggcccatg
gatcctgttgtccaacaccagtctgggccatctcacaacaggggacccctgatagctcaa
ggttggggagagatacccagctcccacacaaaatcagagagctcttggggggaagctgca
cccgctccggttagtgttgacaatgggacgtctgcctggagcaaatctaccgggagctgg
ggagactcagacagctatggcagaggcaacccgacagtcacgtctgcatcttgcaaacct
gcccctaaacctatgcaagacggatggggaggtggaggtgaagagctgaacttgtcgggg
ggtcagtgggatgctgaggagggagacatgtggaacaacgctgcctcccaggagagcaac
tcctcctgtaactcttggggcaatgcatctaaaaagggcccacagaagctctcccagggt
aaggtcccaggaaagcaagaagatgcctggatcatgaatcgtcttatcaaacagctgaca
gacatgggcttccctagggatccagcagaggaggctttgaagagcaacaacatgagcctg
gaccaggcaatgagtgccctgctcgagaagaagacggagatggacaagcgggggatgggg
atagccggccacgactacaacaacgggctcatcaacaagcccataagctgccctcggcct
ccgcttctttccaaagaccccttgtctgatccccgcttgcccttcatggataagcagatg
cagagtggaatgtttggtagtggtggagcagtacaagcccgggccatgcagcatccgcag
ccgcctcctcacccgtcagtgccgcctctcagttcctctcagcctagtctacgggctcaa
gtgcctcagtttctctcccctcaggttcaagcacagctcttacagtttgcagcaaaaaac
attggtctgaatcctgcacttttaacctcaccaataaaccctcaacatatgacccttctg
aatcaactttaccagctgcaactggcataccagcgtttacaaattcagcagcagatgttg
caggcgcaacgcaacgtttctggccccattcgacaacaagagcagcaagttgcacgtaca
atcaataacatgcagcagcagatccaacagcaccagcgtcagctggcccaggccctactg
atgaaacagcagcaacagcagccgcctccttcccactcgggcctgcatcatggagggtcc
aaatccaccctggattcatttccaggtcacccccaggctcatggcctccctgacctgcag
accaaagagccgcagccatctcccaacacctacagtccctactctctctctggactgaat
ccaaacatgaatgtaaactgcatggaggtgggaaatctgtctatgaaggaacccccccag
cctcaatcgcgcctatcgcagtggacgcatcccaactctatggaaagcctctctgaaagc
tcctctcctcttgagcccaacctgggcaagcatggtgccaaccttggcctatctggtaag
ccccctcagctagaggactcttacagcccttacaacatgatgtccagctcagagtcccct
accagcccccttgtcaccccagacagctggggacagggcaagagcagcaatgacaagatg
gccaatgggaccaatatcaactggccaccagagttctgccccggtgtgccctggaagggt
ctccagaatattgaccctgagactgaccctaacgtgaccccaggcagtgtccctagcggg
cccaccatcaacaccaacatccaagatgtcaaccgctacctactacgggacaggagtgga
ggctcctctcccacttcatctcagaacgaggctctgcctccttccactgattggccagtc
agtgcctacactagctcattcagtctgtcgtccccggagacagacgatgcaggtaaactg
tcagagatgaaatctacttggtctccaggtcccatttctcacaaccagggctctctctcg
cacgagctgtggaaggttccccagggcccccggagcaaacacaatgacccgttgggctcc
cgcaaagacagacaaatactccggggccagaccatttaa
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integrated database retrieval system
