Etheostoma cragini (Arkansas darter): 117958221
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Entry
117958221 CDS
T07493
Symbol
zgc:86896
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04144
Endocytosis
ecra04517
IgSF CAM signaling
ecra04530
Tight junction
ecra04810
Regulation of actin cytoskeleton
ecra05100
Bacterial invasion of epithelial cells
ecra05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117958221 (zgc:86896)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117958221 (zgc:86896)
09144 Cellular community - eukaryotes
04530 Tight junction
117958221 (zgc:86896)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117958221 (zgc:86896)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117958221 (zgc:86896)
05100 Bacterial invasion of epithelial cells
117958221 (zgc:86896)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117958221 (zgc:86896)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecra04812
]
117958221 (zgc:86896)
Membrane trafficking [BR:
ecra04131
]
Others
Actin-binding proteins
Arp2/3 complex
117958221 (zgc:86896)
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
117958221 (zgc:86896)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_VPS8
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_ELP1_1st
PEP5_VPS11_N
SH3_3
Motif
Other DBs
NCBI-GeneID:
117958221
NCBI-ProteinID:
XP_034750387
LinkDB
All DBs
Position
15:23660395..23667654
Genome browser
AA seq
368 aa
AA seq
DB search
MSLYSFGLEPISCHTWNKDRTQIAVSPNNNVVIIYEKNGKEWVKIHELTEHSGRITGIDW
APESNRIVTCASDRNAYVWTLKDGVWKPTLVLVRINRAATCVKWSPLENKFALGSGARLI
SVCYFEKENDWWLSKHIKKPICSTVLSLDWHPNNILLAAGSADFHCRVFSTYIKDIEDKP
GPTAWGAKMPFGEVLMEHKDCGGWVHSVSFSPGGDQLACVAHNSSITVVDATQGKGVTQL
TTNHLPLLSVLYVSPTEIVAAGHDCCPYQFTYKGPGALEFVKKLDIPKQTSKSSVSAMQH
FRNLDKKATDEESNEMGNVHQNSIMQLCVVSGKKARVEKYSSVGLDGAVVIWDFKVHVKP
PCKRETGI
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctctacagttttggcctggagccgatctcctgccacacctggaacaaagacagg
acccagatcgcagtgagtcctaacaacaacgtggtgatcatctatgaaaagaatggcaaa
gaatgggttaagatccatgagctgactgagcacagtggacgaatcacaggcattgactgg
gccccggagtccaaccgcattgtaacatgtgcctccgaccgcaacgcctacgtgtggact
ctgaaggacggcgtctggaagcccaccctggtcctggtgcgcatcaaccgggccgccacc
tgtgtgaagtggtccccactggagaacaagttcgccctgggcagcggagctcgcctcatc
tccgtctgctactttgagaaggagaacgactggtggctgagcaagcacatcaagaaaccc
atttgctccacagtcctgagtctggattggcatccaaacaacatcctactggcggctggg
tccgcagacttccactgcagggttttctcaacctacattaaggacatcgaggacaagccc
ggacccactgcctggggggccaaaatgccttttggggaggtgctgatggagcataaggac
tgtggaggctgggtgcacagtgtctccttctcccctgggggagaccagctggcctgtgtg
gcccacaacagcagcatcactgtggtggatgccacccagggaaagggggtgacccagctg
accaccaaccatctgcctcttctgagtgtgctctacgtcagccccactgagattgttgct
gcgggccatgactgttgcccgtaccagttcacctataagggtccaggtgctctggagttc
gtgaagaagctggacatccccaagcagacctctaagtccagcgtgtcagccatgcaacac
ttccgcaacctggacaagaaggccacggacgaggagagcaacgagatgggcaacgtgcac
cagaacagcatcatgcagctgtgtgtcgtatctgggaagaaagccagagtggagaagtac
agcagtgtgggtctggatggagccgtcgtcatctgggactttaaggtacacgtcaaacca
ccatgcaaaagggaaactgggatttag
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