Etheostoma cragini (Arkansas darter): 117958237
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Entry
117958237 CDS
T07493
Name
(RefSeq) uncharacterized protein LOC117958237
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ecra04054
]
117958237
Pattern recognition receptors [BR:
ecra04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117958237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
NOD2_WH
PRY
SPRY
LRR_6
LRR_4
LRR_8
AFG1_ATPase
Phage_portal
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
117958237
NCBI-ProteinID:
XP_034750416
LinkDB
All DBs
Position
15:complement(71723..931339)
Genome browser
AA seq
1698 aa
AA seq
DB search
MSQCEDREEGVPPPKPPLWGDHDSQTKAQSPEKQHGPGPGSGPSCVSMKSDRSMALPVFF
KDGCLSDDQRIHQRPDCPEPDPSCVSMKSDRSMDCPVFFKDGRHSDDQRMNLEEPDPSCV
SMKSDWSMDKPLGFKDGRHSVDQSVSSPDEGVDSAMSQCEDREEGVPPPKPPLWGDHDSQ
TKAQRIHQRPDCPEPGPSCVSMKSDWSMDRPIDFKDGRHSVDQSVSSPDEGVDSAMSQCE
DREEGVPPPKPPLWWDHDSQTKAQSPEKQHGPGSGPRTRLRPGSVPAPEPSCLSFKSDHS
KEFYLTFKQDKKIHQGPDCPGPGPSCVSMKSDQSMGCPVVFKDGRQSADERRDLEEPGPS
FVSRKSDGSIDIPVDFKDGCHSVDQRRNLEEPEPSCVSMKSDWSMYEPLYFKDGRHSVDQ
SVSSPDEGVDSAMSQWEDREEGVPPPKPPLWGDHDSQTKAQSPERQHRPGPGPGPGPGPK
PVSFKSDNSKDFVLYFKQRYDKKRNLEEPGPSCVSMKSDGSVDFKDGRHSVDERRNLEEP
EPSCVSTKSDGSMGPPLKFKDGRHSVDQSVSSPDEGVDSAMSQCEDREEGVPPPKPPLWG
DHDSQTKAQSPEEQHRPGPGPGPKPGPGPSCASFKSDDSKKNYINFKQRYDNKRNLEEPE
PSCVSMKSDRSMGPPLYFKDGRHSVDQRVDQESSEGPSGQSAQQHQTHLDSIFMLLEDDI
VTFVKNELKKIQKVLSPDYPECLESQREDEEVSDGEDEEQRRSSREAFLKITLHFLRRMK
QEELADRLQSRSYHGVCKRKLKSNQQKTFQCMFEGIAKAGNPTLLNQMFTEIYLMEGGAA
EVNDEHEVRQIETASRKPDRPETTIRQEDIFKTPPGRDEPIRTVMTKGVAGIGKTVLTQK
FTLDWAEGKANQDIQFTFPFTFRELNVLKERKFSLVELVDYFFSETKEAGICRFEEVVFI
FDGLDECRPPLDFLKTEILTDVTESTSVGVLLTNLIRGKLLPSARLWITTRPAAANQIPP
GCVDMVTEVRGFTDAQKEEYFRKRFRDEEQASRIISHIKRSRSLHIMCHIPVFCWITATV
LEDMLKTREGGELPKTLTEMYIHFLVVQSKVKNIKYDGGAETDPHWSPESRKMMESLGKL
AFEQLQKGNLIFYESDLTECGIDIRAASVVSGVFTQIFKEEKGLYQDKVFSFVHLSVQEF
LAALHVHLTFTNSGVNLLAEEQTSLSQWFLFRNKPEPTILHQSAVDKALQSPNGHLDLFL
RFLLGLSLQTNQSLLRGLMTQTGSSSKTKQKTVEYIKKKISKDLSAERSINLFHCLNELN
DRSLVEQIQQSLSSGSLSTDKLSPAQWSALVFILLSSENDLDVFDLKKYSASEGALLRLL
PVVKASNKALLSGCNLSERSCEALSSVLSSQSSSLRELDLSNNNLQDSGVKVVSAGLKSP
HCRLEILSLSGCLVSEEGCTSLVSALNSNPSHLRVLDLSYNHPGDSGVKLLSAGLKDPHW
RLDTLRTDHGGPQRLRPGLRKYVCELELDTNTVYRGLKLSDNNRKVTGVLENQPYPDHPE
RFDWWEQLLCRDGLTGRCYWEVERRGGVDIAVSYRGIRRKGGSRDCWFGQNDQSWSLICS
DDGYSVCHNTRETVLPSSSVSNRVAVYVDCPAGSLSFYAVSSDSLIHLHTFYTTFTQPLY
PGFMVWFGSSVSLCPLRD
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtgtgaggacagagaggagggagtccctccccctaaaccccctctgtggggg
gaccatgacagccagaccaaagctcagagcccagagaagcagcacggacctggacctgga
tctggacccagctgtgtgtccatgaagagtgaccggtctatggctcttcctgtattcttc
aaagatggatgcctctctgatgatcaaaggatccatcagagaccagactgtcctgaacct
gatcccagctgtgtgtccatgaagagtgaccggtctatggattgtcctgtattcttcaaa
gatggacgccactctgatgatcaaaggatgaatctggaagaacctgatcccagctgtgtg
tccatgaagagtgactggtctatggataaacctttaggattcaaagatggacgccactct
gttgatcaaagtgtttcctctccagatgaaggtgtggactctgctatgagtcagtgtgag
gacagagaggagggggtccctccccctaaaccccctctgtggggggaccatgacagccag
accaaagctcagaggatccatcagagaccagactgtcctgaacctggacccagctgtgtg
tccatgaagagtgactggtctatggatcgtcctatagacttcaaagatggacgccactct
gttgatcaaagtgtttcctctccagatgaaggtgtggactctgctatgagtcagtgtgag
gacagagaggagggggtccctccccctaaaccccctctgtggtgggaccatgacagccag
accaaagctcagagtccagagaagcagcacggacctggatctggacccagaaccagactc
agacctggatctgtacctgcacccgaacccagctgcttgtccttcaagagtgaccattca
aaggaattttatcttacttttaaacaggataaaaagatccatcagggaccagactgtcct
ggacctggacccagctgtgtgtccatgaagagtgaccagtctatgggttgtcctgtagtc
ttcaaagatggacgccagtctgctgatgaaaggagggatctggaagaacctggacccagc
tttgtgtccaggaagagtgacgggtctatagatatacctgtagacttcaaagatggatgc
cactctgttgatcaaaggaggaatctggaagaacctgaacccagctgtgtgtccatgaag
agtgactggtctatgtatgaacctttatacttcaaagatggacgccactctgttgatcaa
agtgtttcctctccagatgaaggtgtggactctgctatgagtcagtgggaggacagagag
gagggagtccctccccctaaaccccctctgtggggggaccatgacagccagaccaaagct
cagagcccagagaggcagcacagacccggacctggacctggacccggacccggacccaaa
cctgtgtccttcaagagtgacaactcaaaggacttcgtcctttattttaaacaaagatat
gacaaaaagaggaatctggaagaacctggacccagctgtgtgtccatgaagagtgacggg
tctgtagacttcaaagatggacgccactctgttgatgaaaggaggaatctggaagaacct
gaacccagctgtgtgtccacgaagagtgacgggtctatgggtcctcctttaaagttcaaa
gatggacgccactctgttgatcaaagtgtttcctctccagatgaaggtgtggactctgct
atgagtcagtgtgaggacagagaggagggggtccctccccctaaaccccctctgtggggg
gaccatgacagccagaccaaagctcagagcccagaggagcagcacagacctggacctgga
cctggacccaaacctggacctggacccagctgtgcatccttcaagagtgacgactcaaag
aaaaattatattaattttaaacaacgatatgacaataagaggaatctggaagaacctgaa
cccagctgtgtgtccatgaagagtgaccggtctatgggtcctcctttatacttcaaagat
ggacgccactctgttgatcaaagagtggaccaggagagctcagagggtcccagtggtcag
tctgcccagcagcatcaaacccacctggactcaatctttatgctgctggaggacgacatc
gtcacttttgtgaagaacgagctgaagaagatccaaaaggttctgagtccagattaccca
gaatgcttagagagccaaagggaggatgaggaggtgtctgacggtgaggatgaagagcag
aggaggagcagcagagaggcatttctgaagatcacactgcacttcctgaggagaatgaag
caggaggagctggctgaccgtctgcagagcagaagttatcatggagtttgtaagcgtaaa
ctcaaatctaaccagcagaagacgttccagtgtatgtttgaggggattgctaaagcagga
aacccaacccttctgaatcagatgttcacagagatctacctcatggagggaggggctgca
gaggtcaatgatgaacatgaggtcagacagattgaaacagcatccaggaaaccagacaga
ccagaaacaaccatcagacaagaagacatctttaaaaccccacctggaagagatgaacca
atcagaaccgtgatgacaaagggagtggctggcatcgggaaaacagtcttaacacagaag
ttcactctggactgggctgaaggcaaagccaaccaggacatccagttcacattcccattc
accttcagagagctgaatgtgttgaaagagagaaagttcagcttggtggaacttgttgat
tacttctttagtgaaaccaaagaagcaggaatctgcaggtttgaagaggtcgtcttcatc
tttgacggtctggatgagtgtcgacctcctctggacttcctcaaaactgagatcctgact
gatgttacagagtccacctcagtcggtgtgctgctgacaaacctcatcaggggaaaactg
cttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctcct
gggtgtgttgacatggtgacagaggtcagagggttcactgacgcccagaaggaggagtac
ttcaggaagagattcagagatgaggagcaggccagcagaatcatctcccacatcaagaga
tcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgctacagtt
ctggaggacatgttgaagaccagagaggggggagagctgcccaagaccctgactgagatg
tacatccacttcctggtggttcagtccaaagttaagaacatcaagtatgatggaggagct
gagacagatccacactggagtccagagagcaggaagatgatggagtctctgggaaaactg
gcttttgagcagctgcagaaaggcaacctgatcttctatgaatcagacctgacagagtgt
ggcatcgatatcagagcagcctcagtggtctcaggagtgttcacacagatctttaaagag
gaaaaaggactgtaccaggacaaagtgttcagctttgtccatctgagtgttcaggagttt
ctggctgctcttcatgtccatctgaccttcaccaactctggagtcaacctgctggcagaa
gaacaaacatccttaagccagtggtttctatttagaaacaaacccgaaccaacaatcttg
caccagagtgctgtggacaaagccttacagagtccaaatggtcacttggacttgttcctc
cgcttcctcctgggtctttcactgcagaccaatcagagtctactacgaggtctgatgaca
cagacaggaagtagctcaaagaccaaacagaaaacagtggagtacatcaagaagaagatc
agtaaggatctgtctgcagagagaagcatcaatctgttccactgtctgaatgaactgaat
gatcgttcactagtggagcagatccaacagtccctgagttcaggaagtctctccacagat
aaactgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcagaaaacgat
ctggacgtgtttgacctgaagaaatactctgcttcagagggggctcttctgaggctgctg
ccagtggtcaaagcctccaacaaagctctgctgagtggctgtaacctgtcagagagaagc
tgtgaagctctttcctcagttctcagctcccagtcctctagtctgagagagctggacctg
agtaacaacaacctgcaggattcaggagtgaaggtggtgtctgctggactgaagagtccc
cactgtagactggaaattctcagtctgtcaggctgtctggtctcagaggaaggctgtact
tctctggtctcagctctgaactccaacccctcccatctgagagtgctggacctgagctac
aatcatccaggagactcaggagtgaagctgctgtcagctggacttaaggacccacactgg
agactggacactctcaggacggaccatggtggaccacagagactgagacctggtctgagg
aagtatgtctgtgaactggaactggacacaaacacagtatacagaggactcaaactgtct
gacaacaacaggaaggtgacaggtgtgttagagaatcagccatatcctgatcatccagag
aggtttgactggtgggaacagctgctgtgtagagatggtctgactggtcgctgttactgg
gaggtcgagaggagaggaggggttgatatagcagtgagttacagaggaatcaggaggaaa
ggaggcagtagagactgttggtttggacaaaatgatcagtcctggagtctgatctgctct
gatgatggttactctgtctgtcacaataccagagaaacagtcctcccgtcctcctctgtc
tctaacagagtagcagtgtatgtggactgtcctgctggctctctgtccttctacgcagtc
tcctctgactcactgatccacctccacaccttctacaccacattcactcagcctctctat
cctgggtttatggtctggtttggttcctcagtgtctctgtgtcctctgcgggactga
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integrated database retrieval system
