Etheostoma cragini (Arkansas darter): 117958354
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Entry
117958354 CDS
T07493
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117958354
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117958354
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
U-box type E3
117958354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-C3HC4_2
U-box
zf-C3HC4_3
zf-CCHC
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
117958354
NCBI-ProteinID:
XP_034750568
LinkDB
All DBs
Position
15:complement(4756665..4776788)
Genome browser
AA seq
1822 aa
AA seq
DB search
MTHIHYKFSSKLSYDTVVFDGPHVTLRDLKRQIMGREKLRAGDCDLQITNAQNKEEYTDD
ESLIPKGSSVIVRRIPIIGGKSSSSKTRNVERLDVQAHAFGAYRAMDDQNSSRAVPFFSK
MQNLADVDATEEDKIKVMMNQSTYDSMNYNKKFGTVLPANYTCYRCGNTGHHIRNCPTSG
DKNSEAPLKIKKSTGIPRSFMVEVDDPNTKGAMLTNCGRYAIPTIDAEAYAIGKKERPPF
GPQVETMSEGEEDPVPEELLCLICHDLLSDAVVIPCCGNSYCDDCIRTALLDSEDHICPT
CSQSDVSPDTLIANKFLRQAVDNFKKERSFTKSLRKGCGTSQSQNPTPIPSPVPTPPPLT
VQSQPQKPHLPTHSQQDPLRSQAADTPPSSQVCGTPPTETGPASAPNTPSTSLQPAQSHL
EIPDKEAEEKTHDDSAAAAAPSVPVSPEEPIDTPSQLIPTVMATPVAEQPQAVSVNLQQP
SSGPAPRPYGPSTSWDSPSSSSGCPIGGWDESNTRQPPPTSCSYLATPPPSLFPSPNFHT
FLAAHQPLSYPPPAPIWTLPNLQAAPIPSLCPSSSIPALIPKEWYRHQRKKKERSPHRGS
SHRRSSHRSYSKSSKSKSSRSYSRSSSRSRSRSQGRSRPQSPYSRERDLQTRSHSSHSYS
YGYKRSPTPSSSSSPRVGYRARSKSPSGHRKNSHHSRHHNKKSASSSYSSRRRGEDSHRE
AGGSGGSYPCGQPANQSSSLDLNRERYLQWKREYKEWYDKYFSSYVGHFHQLPLPLLNLP
PPPQWGDREGTGNPLHAHSRSRDQFQGRRAVRIGGCSPPSQSSSDSRSPPSQSSHDSCST
PSQSSSDSRSSPSHSSNDSQSPASRSSSDGRSTPSENGAPPTAYQRRCAEKSSRPPITLT
KGSKKAKLHERRENDKQLMAKNLKDLSTLKQKQKSMKKREEGRGEESSSPNTGSNACKDG
TPVQDQATGSDALEPVQSLVKPDKRLDKDCERKGREQRNLEIEKGWRRGKHSDSRQDVGR
RHRERPTKEASRADQDTYRYPGGSRDHDSRSEKNRKKKREDLERSSAKALSSKCLETKVE
EDTKTRKSESPNPFERTKPKTEKKKEWKTCPLTEREIWEGGIKVKPQKKISININLEGTR
KDEKTEKRDMSYSESVTGKSKGGIEKAGDGEEEKLNGGETMNANVKNESSRDMEGLSGEK
IKPGEGGARQKWEKATFRDDTGEMLKKIAGEKKDIGEKNEDREKKDFDLLHSPLRSVEEE
RERKEGQAMGGLFACTRKERAEGESTCQENRAIPPGESKPKEKLIKGVKQRMRKDEEEDN
NTMGSESQRGRKESHCDTPNTVVQDGSSYEDHQERNTGLKTLEEYTQDRGADLEGELTLI
QVPHSKWEKEESEEGERVEGVIKVQTVALAMFLSSPSTSVTTETTTNRDTEKEKERERSV
ETEIEEASAMARGRDREREKEKTPILSSSQRIVAPSSGKDGTEGALCTDREWEKRMERHR
DRERDMENERPKESKRSKERAREEENGRDRKRERGHSGIAYAKKRNPPSSSHSFSYSTPT
HDTERRDRRRGGDTDNNKSSPSPGGKFSGGRSRECRATGLLGQITHKSYRDTPLDSKFKD
KDHPHYYHNHQDPSGIYRPAGTHHSPPSLSHSGGKERDLRSSGAELGKPRISSPGQEFMQ
NRSRNESNVEKEEWKKKKSIKGKGERETQEMVSEREGGRRCKDEAVELEEQTKWEGGREL
EEGERPSSGSRSNSVSSSASQENDKEGRKEKKSQKKRQKEKRHASPELLEEGELKKQKRK
KKPSKTSRDEEEEGSSAVVEDR
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgactcatattcattataaattctcctccaaactcagctacgacactgtggtttttgac
ggcccgcacgtcaccctgagggatctgaagaggcagatcatgggcagggagaagctccga
gccggggactgcgacctgcagatcacaaacgcccagaacaaagaagagtacacagatgat
gaaagtttgatccccaaaggctcctccgtcatcgtcaggagaatcccaatcattggaggg
aagtccagcagcagcaagacccgcaacgttgagcgattagatgtccaggcccacgccttt
ggagcctacagagcaatggatgaccagaattcttccagagccgtaccctttttctccaag
atgcagaacctggccgatgtagatgcgacagaagaggataagattaaagttatgatgaat
cagtcgacctatgactccatgaattacaataagaagtttggtactgtacttcctgccaat
tacacctgttatcgctgtggaaatactggacaccacatcaggaactgtcccaccagcggg
gataaaaactcagaggcccctctgaaaataaagaaaagcacaggcatccctcgttccttc
atggtagaggtggacgatccaaacacaaagggagccatgctgaccaactgtggacgctac
gcgattcctaccatagacgctgaggcatacgctattggcaagaaggagaggcctccattt
ggtccacaggtggagactatgtcagaaggcgaggaggatcctgtacctgaggaactcctc
tgtctgatctgccatgacctgctgagtgacgctgtggtcataccctgctgtggaaacagc
tactgtgatgactgtattcgcactgccttactggattcagaggatcacatctgccccact
tgtagccaatcagatgtctcacctgataccctgatagccaataaatttctcagacaggct
gtggacaattttaagaaagagcgaagcttcactaaaagtctgaggaaagggtgtggtacc
tcccagtcccaaaatccaaccccgataccgagccctgtccccaccccgccccctctcact
gtgcagagccaaccacagaagcctcacttgccaacccacagccagcaggaccctctccgc
tcacaggctgcagacacaccgccctcgtctcaggtgtgtgggactccgcccacagaaaca
ggccctgcctctgctcccaacacgccgagcacttccctccagcctgcacaaagccacctg
gagatacctgacaaagaggctgaagaaaagacacacgatgactcagcagctgctgctgcc
ccgtctgtgccagtttcaccagaagaacccattgatactccatcacagctgataccaaca
gttatggctactccagtggcagaacagccccaggccgtcagtgtgaatctacagcagccc
tcgtcaggtccagccccaagaccctatgggccatcaacatcctgggatagcccctcttcc
tcctcgggttgtcctattggaggctgggatgagtctaacacccggcagccccctcccacc
tcctgttcatatctagcaactcctccaccttctctctttccctcccccaatttccacaca
ttcctcgctgctcatcagcctctcagttacccaccccccgcacccatctggacactccca
aacctccaagctgcccccatcccttctctgtgcccctcatcctccatccctgccctcatc
cccaaggagtggtacaggcatcagagaaagaagaaggaaaggtcacctcaccgaggatct
tcccacagacgctcctcccatcgttcttattcaaagtcttccaagtcaaagtcttctcgc
tcgtactctcgctcttcaagcagatccagatctaggtcccaaggcagatcaaggccccaa
tctccttactcccgcgaaagagacctccaaacccgctctcattcctcccactcctacagc
tatggttacaaacgttccccaacaccgtcctcgtcatcttcacctcgagtcggttaccgt
gccaggtccaagtcaccatcaggtcaccgcaaaaacagccatcatagtcggcatcacaat
aagaaatccgcttcaagcagctacagctccaggaggcgaggagaagactcccacagggaa
gcagggggctcggggggaagttacccgtgtggtcagcccgcaaatcaaagtagcagcctg
gacctgaacagagagcgctacctgcagtggaaaagggagtacaaagagtggtatgataaa
tatttcagcagctatgtcggccacttccaccagctacctcttcccctcctcaatctccct
cctcctcctcagtggggggacagagaaggaaccgggaatcccttgcatgctcactcccgc
tcacgcgaccaattccaaggtagacgcgccgtgcggataggcggctgctcccctccgtcg
cagtcctccagtgacagccgctcccctccatctcagtcttcacatgacagctgctccaca
ccatctcagtcctccagtgacagtcgctcctctccatctcattcgtccaacgacagccag
tccccagcctctcggtcgtccagcgacggacgctccacaccatccgaaaacggagctccg
ccaacggcatatcagcggaggtgcgcggagaagtccagccgcccgccaatcacacttaca
aaaggcagtaagaaagcaaaactgcatgaaagaagagagaatgataagcaactcatggca
aagaatttgaaggacctcagcaccttaaaacagaagcagaagagcatgaagaaacgtgag
gaaggaagaggagaggagtcatcatcacctaatactggatcaaatgcctgcaaggatggc
accccagtacaggaccaagcaactggcagcgatgccttagaaccagtccaatcacttgtg
aaaccagataaacgtttggataaagactgtgaaagaaaaggcagagaacagaggaatttg
gaaattgagaaaggatggagaagaggcaaacattcagactcccggcaggatgtggggaga
cggcacagagaaaggcccactaaagaggcaagcagggcggatcaagacacatacagatac
cctggaggcagcagagatcatgactcaagatcagagaagaatagaaaaaaaaaaagagag
gaccttgagagaagttctgcaaaggctctaagcagcaaatgcctggaaactaaagttgaa
gaggacaccaaaacccgcaagagcgaatctccgaatccatttgagagaaccaagccaaaa
acagagaagaaaaaggagtggaaaacatgtcctctgacagagagagaaatctgggaggga
ggcataaaggtgaaaccacagaagaagataagtatcaacataaacctggaaggaacgagg
aaggacgagaaaaccgaaaaacgggacatgtcttattcagagagcgtcacaggaaaatca
aagggaggaatcgagaaggctggtgatggagaggaggagaagttaaatggaggagaaaca
atgaacgcaaatgtaaagaatgaatccagcagagacatggaaggtttgtctggagaaaaa
atcaaaccaggggaaggaggggcgagacagaaatgggagaaagctaccttcagagatgat
acgggagagatgttgaagaaaattgcaggagagaaaaaagatattggagagaagaatgag
gacagagaaaagaaagactttgacttattgcacagcccccttagaagtgtggaggaggaa
agggagagaaaggaaggacaagcgatgggagggttattcgcatgtaccagaaaggagagg
gcagagggagaaagcacgtgccaggaaaacagagcaatcccgccgggggaatcaaagcca
aaagagaagctgataaagggagtgaagcaaaggatgaggaaagacgaagaagaagacaac
aacacaatgggatccgagtcacaaaggggcagaaaggagagccactgtgacacaccaaac
actgtggtgcaagatggcagcagctacgaggatcatcaggagcggaacacagggttgaaa
acactggaagagtacacccaggacagaggtgcagacctagagggcgagctcacactcata
caggtccctcactccaaatgggagaaggaagagtctgaggaaggggagcgggttgaagga
gtgatcaaagttcaaacagttgctcttgctatgtttctgtcttcaccgtccacgtccgtg
acgacagagacaacaaccaacagggatacagagaaggaaaaggagagagagaggtcagtg
gaaacggagatagaggaggccagcgcaatggcaagaggaagggacagggagagagagaaa
gagaaaacccccattttgtcaagttcacagagaattgtggctccctctagtggcaaagat
ggaactgaaggcgccttgtgcacagacagagagtgggagaagaggatggagagacacagg
gacagagagagagatatggagaatgagaggccgaaagagagcaaaagatcaaaagaaaga
gcaagggaggaagagaatgggagagacagaaagagagagagagggcacagcggcattgcc
tacgccaaaaagaggaatcctccctcctcttctcactccttctcttattcgacaccgaca
catgacacagagaggagagacaggcggagagggggcgacacggacaacaacaagagttcc
ccctctcccggtgggaaattctctggtggcagaagcagggaatgcagagctaccggactg
cttggtcaaataacccacaaatcatacagagacacgccactggattctaaatttaaagac
aaagaccatccccactactaccacaatcaccaagatccatcagggatctacagacctgca
gggacccaccactccccaccttccctctctcacagcgggggtaaggagagagacctacgg
tcctccggggcagagctggggaagcccagaataagcagccctggtcaggagttcatgcag
aacagaagtagaaatgagagcaatgttgaaaaggaggagtggaagaaaaagaagtcaatc
aaaggcaaaggagagagagaaactcaagagatggtgtctgagagagaaggaggtcgtcga
tgcaaggatgaagccgtcgaattggaagaacagaccaagtgggagggagggagagagctg
gaggaaggggagaggcctagcagcggtagccgcagcaacagcgtcagttcttcagcaagc
caggagaacgacaaggaggggagaaaagagaagaagagccaaaagaagcgccaaaaggag
aagagacacgcctccccagagctgctggaggaaggggagctgaagaaacaaaaacgcaag
aagaagccgtcaaagacaagcagagatgaggaggaagaggggagtagtgcagtggtggaa
gaccggtag
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integrated database retrieval system
