Etheostoma cragini (Arkansas darter): 117958412
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Entry
117958412 CDS
T07493
Symbol
itgb3a
Name
(RefSeq) integrin beta-3a
KO
K06493
integrin beta 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03266
Virion - Herpesvirus
ecra04081
Hormone signaling
ecra04145
Phagosome
ecra04148
Efferocytosis
ecra04510
Focal adhesion
ecra04512
ECM-receptor interaction
ecra04810
Regulation of actin cytoskeleton
ecra04820
Cytoskeleton in muscle cells
ecra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
117958412 (itgb3a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
117958412 (itgb3a)
04512 ECM-receptor interaction
117958412 (itgb3a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117958412 (itgb3a)
04148 Efferocytosis
117958412 (itgb3a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117958412 (itgb3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117958412 (itgb3a)
04810 Regulation of actin cytoskeleton
117958412 (itgb3a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117958412 (itgb3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117958412 (itgb3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117958412 (itgb3a)
04515 Cell adhesion molecules [BR:
ecra04515
]
117958412 (itgb3a)
04090 CD molecules [BR:
ecra04090
]
117958412 (itgb3a)
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
117958412 (itgb3a)
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117958412 (itgb3a)
Cell adhesion molecules [BR:
ecra04515
]
Integrins
Integrin beta subunits
117958412 (itgb3a)
CD molecules [BR:
ecra04090
]
Proteins
117958412 (itgb3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
I-EGF_1
PSI_integrin
EGF_integrin
EGF_2
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
117958412
NCBI-ProteinID:
XP_034750665
LinkDB
All DBs
Position
15:14873441..14885389
Genome browser
AA seq
797 aa
AA seq
DB search
MSSRLRYSPAMGTLSDRPVILFLLMLAASKVFGSNICTSQGVTTCQRCLAVHPTCAWCSQ
EEFGKGGSSASRCDLKQNLLNGGCSKTAVEFPSSTLSIQENKPLSDKASGTADDVTQIKP
QKIHMALRPGDTKHFTVSVKQVEDYPVDLYYLMDLSYSMKDDLARLRTLGNELAVAMGRT
TSNLRMGFGAFVDKTTSPYMYMYPPEAVQNPCYGIHDTCLAQFGFKHVLSLTERVARFTE
EVGKQQVSRNRDAPEGGFDAVMQAVVCKDKIGWRPDASHLLVFTTDAKTHTALDGRIAGI
VQPNDGVCYLDNENVYNKSTVLDYPSLALMTDKMSENNINLIFAVTSYVVPLYQEYSQLI
PGTTVGTLSDDSGNVIQLIEDAYAKIRSKVELELLGVPEELNLSFNATCLNGEVIRGLKS
CSGLKIGDTVSFSVEAQLRGCPKEKSRTFTIKPRGFKDTLEVTMDFACGCECEAKAEANS
PICSNGNGTYECGVCQCHQGRLGPRCECSVEDYSPSDDANCIPKPEGPRCSGRGDCLCGQ
CSCHANEFGQVWGKYCECDDFNCLRFKGLLCSDHGKCSCGLCQCDAGWKGENCNCSTRID
TCMSNIGMLCSGRGNCECGVCQCTQPGAYGETCEKCPTCPDSCTIKKECVECQHFKRGQY
TKDNSCSRFCKDEIKVVDELVFHDRLAVNCSYKDENDCVEYFQYYEDESGKSILFVVKEP
ECPQGPDILVVLLAVAGAILLLGLVGLLIWKLLVTIHDRREFAKFEEERAKAKWDTANNP
LYKGATSTFTNVAYRGN
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtcggctccgttactctccagccatgggaactttatcagaccgtccagtgata
ctgtttctcctaatgttggcagcatcaaaggttttcggttccaacatctgcacatcacag
ggagtcaccacttgtcaacggtgcctggctgttcaccctacctgtgcatggtgctctcaa
gaggagtttggaaaagggggatccagcgcatcccgctgtgacctgaagcagaatctgctg
aatggagggtgcagtaagacagctgtggagtttccctccagcaccctgagtattcaggag
aacaaaccgctcagcgacaaggcctcgggtactgctgatgatgtcacacagataaagcct
cagaaaatccatatggcactaaggccaggagataccaagcatttcaccgtgtcagtgaaa
caggtggaggattacccagtggacctctattatctgatggatctttcatattcaatgaag
gatgacttggctcgccttcgcaccttgggcaatgagcttgcagtggccatgggccgcacc
acaagcaacctacgcatggggtttggagcctttgtggacaagaccacttccccttacatg
tacatgtatcctccagaggcagtccaaaacccttgctatggaattcacgacacatgcctg
gctcaatttgggttcaagcatgtcctgtcactgacggagagggtggctcgcttcactgag
gaggtggggaaacagcaggtgtctagaaatagagatgctccagagggtggatttgatgct
gtcatgcaggctgtggtttgcaaggacaagattggctggcgtccagatgcctcgcacctt
ttggtattcaccacggacgccaaaactcacacagccctggatggacgtatagctggaatt
gtccagcccaatgatggagtgtgttaccttgataatgaaaatgtttacaacaaatccact
gtgctggactatccctctttggcactcatgacagacaaaatgtctgaaaacaacatcaat
ctaatttttgctgtgaccagctatgtggtgccgctttaccaggagtacagtcagctcatt
ccaggcacaactgtgggaactctttccgatgactctgggaatgttattcagctcattgag
gatgcctatgcgaaaattcgctctaaagtggagctggaactactgggagtaccagaagag
ctgaatctctccttcaatgccacttgcctaaacggagaggtcatccgtggacttaagtct
tgctctggcctcaagattggagacacagtgtcattcagtgtggaggctcagttgcgtggc
tgccccaaagagaagagccgcacttttaccatcaaacctcgaggcttcaaggataccctg
gaagtcacgatggactttgcttgtggctgcgagtgtgaggccaaggccgaagccaacagt
cccatctgtagcaacggcaatgggacctacgagtgcggtgtgtgtcagtgtcaccagggt
cgtctgggccctcgctgcgagtgctcagtggaggactacagtccgtctgatgatgccaac
tgcatcccaaagccagaggggccacgctgcagtgggagaggagactgtttgtgtggacaa
tgttcatgccatgcaaatgagtttggtcaggtgtggggcaaatattgcgaatgtgacgac
ttcaactgcttgcgcttcaaagggttactgtgctccgaccatgggaagtgcagctgtggc
ctctgccagtgcgacgcgggctggaaaggagaaaactgtaactgctccacacgcatagac
acctgcatgtccaacatcggcatgctgtgcagcggccggggtaactgtgagtgtggtgtt
tgtcaatgcactcagcctggcgcctatggagagacctgtgagaaatgccctacgtgtcct
gattcctgcactataaaaaaggagtgtgttgagtgtcagcacttcaagagaggacagtac
accaaagacaacagctgcagtagattctgcaaagatgagattaaagtagtggatgaactg
gttttccatgatagacttgcagtgaattgctcatacaaagatgagaatgactgcgtggag
tacttccagtattacgaagacgaaagtggcaaatccattctgtttgtggtgaaagagcca
gaatgtcctcagggtccagacatcttagtggtgctcttggcagtggctggagccatcctg
ctactgggccttgttggcctgctcatctggaagctgctggtcaccatccacgaccgcaga
gaattcgccaagtttgaggaagagagagccaaagccaaatgggatacggctaacaaccct
ttgtataaaggagccacctccaccttcaccaatgtagcataccgaggcaactaa
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integrated database retrieval system
