Etheostoma cragini (Arkansas darter): 117958642
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Entry
117958642 CDS
T07493
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecra02000
]
117958642
03037 Cilium and associated proteins [BR:
ecra03037
]
117958642
Transporters [BR:
ecra02000
]
Other transporters
Pores ion channels [TC:
1
]
117958642
Cilium and associated proteins [BR:
ecra03037
]
Other cilia and associated proteins
Stereociliary proteins
117958642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
117958642
NCBI-ProteinID:
XP_034751036
LinkDB
All DBs
Position
15:complement(10238926..10248270)
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AA seq
800 aa
AA seq
DB search
MAYSVNICQTDSEPDFENLGENEARQDSFQLVAEQALSTQRDPQTLQIDVFREDSHINTE
HLPSAASSHMKDKTLDRKQINSLQRDHWSAATLKVLASMPSRTAGINRAAVIPQHARKLS
PVQQTSSQDSSHPSRPMQEDFAQANIEEEISNEENKKEQLVSILRGLSVGERLRKLRASP
LSLADKMEVRKLAFSDVAERSLINRKIPCYTRLSMHISRTWRHCLFSCLPVLTSLQLWHS
PIKRLSGRFGTGVLSYFLFLRTLLLLNLLLFFINGLFLVVPQAVNPPLHPHDSDLNTFTG
LELLTGTGYLFQSVMFYGYYTNTIFKTRRAADSTAESPHLPVSDSNKPQIVPYCIPAAYF
FTITIAFFTICIILVYSMSKAFGRGFHVLKSNGNLAVKVFCSWDFKVSKKTSVRLQFEKI
STQLKELLSEMFHRENKKSCMQRLCRLMVHLTAWAVCLATIFLGATAVHYLSEHSLKQSP
LKETELLLLPAVVSGINLSLPGLFNLCAWVENHDSPSVLVYVSIFRNLLLKVSIVGVLCF
RWLGRIAVEAESRGLQCWESFVGQELYRLLLMDFLFTVLYTFFGEFLWRLFTKKVLKRKR
KPVFDIARNVLELIYGQTLTWLGVLFAPLLPAVQIIKLFVLFYMKESSLVLNCQASRKPW
RASQMTTFFISLLCFPSFFGVVVSVTYTIWTIKPSTRCGPFRNFTTMFQSRQLWALELEN
AHPILSWLNWAYNALVEKPLFLFLATGVFLMVIYFHTQVIDGQRRIISRLEKQIENEGKD
KKFLITSLQAIYERSGLVGP
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcatacagtgtcaacatttgtcaaacggattccgagcctgattttgagaacctggga
gaaaatgaagcacgtcaggactctttccagcttgttgcagagcaagcactcagcacccag
agggatcctcaaaccctacaaattgacgtttttagggaagactcacatattaatacagaa
catctgccatctgctgcaagcagccacatgaaagataagacactcgacaggaagcagata
aactctctacagcgggatcactggtcagctgctaccttaaaggtcctcgcctcaatgccc
agtcgcactgctgggataaatagagctgcagtaattccccagcatgccagaaaattgtct
ccggtacagcagacgtcatcccaagattcttctcacccttccagaccaatgcaggaagac
tttgcccaggccaatatcgaggaggaaatcagtaatgaagaaaacaagaaggagcagttg
gtgtccatcctccgaggcctctcagtgggcgagcgcttgcgaaagttgcgagcctcaccg
ctcagcctggcagataaaatggaagtgaggaaacttgcttttagtgacgtagctgagaga
tcactcatcaacagaaaaatcccatgctacactcgtctaagcatgcacatttcaaggact
tggcgtcactgtctgtttagctgcctacctgtcctcacttcccttcagctgtggcattca
cccataaagagactgagcgggcgttttggaaccggggtactttcctacttcctgtttctc
cgaacccttctgctccttaacctcctcctcttcttcatcaacggcctgttcctggtcgtc
cctcaagccgtcaaccctcctctccatcctcatgactctgatctcaacactttcactggc
cttgagcttctcacgggcactggctacctctttcagagtgtgatgttttatggctattac
accaacaccattttcaagacacgtcgagctgctgactccactgctgaatcccctcatctg
ccagtctctgactccaacaagccccagatagtgccgtactgtatacctgcagcctatttc
tttaccatcaccatcgccttcttcacaatctgcattatcctcgtgtacagcatgtccaag
gcttttgggagaggttttcatgtcctcaagtccaatgggaatctggcggtaaaggttttc
tgttcctgggactttaaagtcagcaagaagacgtctgtcagactgcagtttgagaaaatc
agtactcagctcaaagaactgctgtctgagatgttccatagagaaaataaaaaaagctgc
atgcagcgactctgccgtctcatggtgcacctgactgcatgggctgtgtgtctggcaacc
atcttcctgggtgccacggcagtccactacctatcagagcattctcttaaacagagtcct
ttgaaagaaactgagctgctgctcttgcctgcagtggtttcaggcatcaacctgtcactc
ccgggtctcttcaatctgtgtgcttgggtcgagaatcatgactcacccagtgtgctcgtc
tatgtctccatcttcaggaacctattgttgaaggtcagtattgttggagtactgtgtttc
cgctggctggggagaattgctgtggaagcagaaagtcgtggtttacagtgttgggagagc
tttgtggggcaagaactgtatcgcttgctcctgatggactttctcttcacagtgctttac
actttttttggagagttcctgtggaggctatttacaaagaaagtgctgaaaaggaagagg
aagccagtgtttgacattgctcgtaatgtgctggaactcatatatggacaaacccttact
tggctcggggtgctgtttgctccactgcttcccgcagtccagatcataaaactgtttgtg
ctgttctacatgaaggagagcagtctggtgctgaactgtcaggcgtcgaggaagccctgg
agggccagtcagatgacaacatttttcatctctcttttgtgcttcccttcattttttggc
gttgtcgtgtctgtcacttacacaatttggacgattaaaccctcgacaaggtgcggccct
tttaggaatttcactacgatgtttcagtccaggcagctgtgggccctggagctggagaac
gcccacccgatcctgtcttggctcaattgggcctacaatgctctggtggagaaaccactg
ttcttattcctcgccactggagtctttctaatggtgatatattttcacactcaggtcatt
gatggccaaaggagaatcatcagtcggttagaaaagcaaattgaaaatgagggtaaagac
aaaaagttcctcatcaccagtttgcaagccatttatgaacggagtggtctggttggccct
taa
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