Etheostoma cragini (Arkansas darter): 117958670
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Entry
117958670 CDS
T07493
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117958670 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecra03021
]
117958670 (gtf2f1)
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
117958670 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
117958670
NCBI-ProteinID:
XP_034751110
LinkDB
All DBs
Position
15:complement(6741386..6748273)
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AA seq
534 aa
AA seq
DB search
MTSLGGSSSSATEYTVRVPKNTSKKYNIMAFNSGDRVNCSTWTQARMERDMSARRIYGEE
ESAEGAAGSEFGKKHREEARRKKYGIVTREFKGEDQPWILKVNGKAGKRFRGLKKGGVTE
NASYYIFTQCPDGAFEAFPVHGWYNFTPQFKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RFREQERGGEDDDDENEKSGKKKKKGGGRGGDLRIHDLEEDLEMSSDDSDSSMGDDGEGK
SKAKKATGKGKAKKKKRKSSDKEALEDSDDGDYEGLEVDYMSDESSSSDEELEKGKSSKG
EHHPKGIDEASESEEESEEEKQNEEEAKDEEEEEEEGKKTPVQPEKKKKKDSSGESESSE
DSDIEGETASALFMKKRTPPKRGGRGSAGSSRTGSRPGTPSIDSASTSNTLSAAASKLEQ
GKRPTLGPSTDSPAAKRLKMEPSSQSPVPSGKSTPQPPSGKSTPSSSDVQLTEEAVRRYL
IRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNINDKMHFYLTE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgacttctctggggggcagcagttcctcagccacagaatacacggtgcgagtccccaaa
aacaccagtaagaagtacaacatcatggctttcaattcaggagacagagtcaactgttca
acttggacacaggctcgcatggaaagagacatgagtgctcggcggatatatggggaggaa
gagtcagcggaaggggcggctggcagtgagtttggcaaaaagcaccgcgaggaagcccgg
cggaagaagtatggtattgtgacacgtgaattcaaaggggaggaccagccctggattctc
aaggtcaatggcaaggccggcaagaggttcagaggtctgaagaagggcggtgttacagaa
aatgcatcctactacatctttacacagtgtccagatggagcctttgaggctttccctgtc
cacggctggtacaactttacaccgcagttcaagcaccgaactctcactgctgaggaggct
gaggaggagtggggcagaagaaacaaggtggtgaatcacttcagcatcatgcttcagaga
cggttccgggagcaggagcgtggtggtgaggatgatgacgacgagaacgagaagtcgggg
aagaagaaaaagaaggggggtgggagagggggcgacctgcgcattcacgacctggaagag
gacctggagatgagcagcgatgacagtgacagcagtatgggggacgatggagagggcaag
tcaaaggcgaaaaaagccacggggaaagggaaagcaaaaaaaaagaagagaaagagcagt
gacaaagaggccttggaggacagcgatgacggtgactacgagggtctagaggtggattac
atgtccgatgaaagcagcagttcagacgaagagctcgaaaagggaaagtccagcaaagga
gagcaccaccccaaagggatcgatgaggcgtctgaaagtgaggaagagagtgaggaggag
aaacagaatgaagaggaagcaaaagacgaggaggaagaagaagaagaaggaaagaaaacc
ccggtccaaccggaaaagaaaaagaaaaaagacagcagcggcgagtcggaaagctccgag
gacagtgacatcgagggagagacagcctccgctctgttcatgaagaagcgcacgcctcct
aaacgtggaggacgtggctctgcgggcagctccaggactggcagtcgacccgggacacca
tccatagactctgcctccacctccaatacactcagtgctgctgccagcaagctagagcaa
ggtaagagaccgactctgggtcctagcactgactcgcccgctgccaaaagactgaagatg
gagcccagcagtcagagccctgttccctctgggaagagtacgcctcaacccccgtcaggc
aaatccactcctagctcaagtgatgtgcagctaacagaggaagcggtccggcgttacctg
atccgtaaacccatgaccaccaaagacctgctgaagaagttccagaccaagcgcacaggt
ttgagcagtgagcagactgtcaacgtgctggcacagatcctgaagcgtctcaatccggag
cgcaagaacataaatgataaaatgcacttctacctcactgagtaa
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