Etheostoma cragini (Arkansas darter): 117958722
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Entry
117958722 CDS
T07493
Symbol
pkd2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ecra03037
]
117958722 (pkd2)
04040 Ion channels [BR:
ecra04040
]
117958722 (pkd2)
Cilium and associated proteins [BR:
ecra03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117958722 (pkd2)
Ion channels [BR:
ecra04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117958722 (pkd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
EF-hand_6
EspA
Motif
Other DBs
NCBI-GeneID:
117958722
NCBI-ProteinID:
XP_034751197
LinkDB
All DBs
Position
2:complement(12242076..12251711)
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AA seq
905 aa
AA seq
DB search
MSSSRVRPQQLKLPQSQTGRLPNRLDSSEGIEMENIQHQDLGLGGVIGTPSPPSRQAWSR
DNPGFEPEDEIMQADWPPASPGRRSVSTASSSSCSSGLGSYAGAGSSTHIPRGGLYPTPT
VDARQQDRHDHRSCMKQILQKIRILWGTELMEDSDNSRERYLRNVLRETVTYVAFLITIC
ILTYGMVSANMYYYTKVMSQLFLDTPLSAGDPSSFRSLSTMEDFWTFTEGPFLNGMYWEV
WYNNKSLPENQSLIYYENLLLGVPRLRQVKVRNESCSIHEDLRDEVHDCYNMYTPTNEDT
TSFGPKKGTAWVYTAESNMNGSSYWGQISKYGGGGYYQDLSRTKEESATQLQFLKDHLWL
DRGTRAVFLDFSVYNGNINLFCIARLLVEFPATGGVVTSWQFQTVRLIRYVSSWDYFVGL
CEVAFCLFILYYVVEEVLEIRIHRLHYFKSLWNCLDVLIVVLSVVAIIMNITRTAMVGNH
LKGLLENHTAHPSFEHLANLQVQFNNVAAVIVFFSWVKLFKFINFNKTMSQLSGTMSRCA
KDLVGFAIMFFIIFLAYAQLAYLVFGTQVNDFSTFQASIFTQFRIILGDFEFSEIEEANP
VLGPIYFTTFVFFIFFILMNMFLAIINDTYSEVKADMSQQRTEMEMSDLIKKGCNKALMK
LRLKKTAVDDISDSLRQAGGKLNIDELRQDLKGKGHTDAEIQAIFAKYDRDGDQELTEHE
HQQMRDDLEKEREDLDLERNSLTRPSSGRSFPRTQDDSEEDDDEDSGHSSRRRGSSSGGV
SYEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLETMERAKLKRRDVLGRLLDGVMEDERL
GRDTDVHREQMERLAREELERWESDDMVSQVSHLQPATPVGPRPRPSSSLSTDGLDTSTN
GGSHV
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatcccgagtcagaccgcagcagctaaagttaccgcagagccagactggcagg
ttgccgaacagactagactcaagcgaagggatagagatggagaacatccagcatcaagac
ctcggtctcgggggagtaataggcaccccgtccccgccgtcaagacaagcgtggagtcgg
gataacccgggttttgagcccgaggatgagattatgcaagccgactggcctccagcgagt
cccgggaggaggtcggtgtccacggcctctagcagcagctgcagcagcggcctaggcagc
tacgccggcgcgggcagcagcacccacatcccccgtggaggactctacccgaccccgaca
gtggatgcccggcagcaggacaggcatgaccaccgcagctgtatgaagcagatactccaa
aaaatcagaattctgtggggcacagagctgatggaggacagtgacaacagtcgagagagg
tacctcaggaacgtcctgagggagacggttacatatgttgcattcctcatcactatttgt
atcttgacttatgggatggtgagtgccaatatgtactactataccaaagtcatgtctcag
cttttcctggacacaccgctttctgccggggatccttcctcttttagaagcctctcaacc
atggaggatttctggacgttcacagagggacctttcctcaatggcatgtactgggaggtg
tggtacaacaacaagagcctgccagagaatcagagtcttatctactatgagaacctcctc
ctcggggtgccacggctccggcaggtcaaagtccgtaacgagtcctgctccatccacgaa
gatctgagagatgaagttcacgactgctacaacatgtacaccccaaccaacgaagacaca
acctcctttggccccaagaaaggaactgcctgggtgtatacagcagagagtaacatgaat
gggagcagttattggggccagatatctaaatatggaggtggaggatactaccaagacctg
tctcgtacgaaagaggagtcagccacccaactgcagtttctgaaagaccacctgtggctg
gacagaggcaccagagcggtgtttctcgacttctctgtctacaatgggaacatcaatctt
ttctgcatcgccaggttgttggtggagttccctgctactggtggggtggtgacttcctgg
cagttccaaacagtgcgtctgatacgatatgtgtccagctgggactactttgtgggtctg
tgtgaggtggcattctgtctattcatcctctactacgtggtggaggaagtgctggagatc
cgcatccaccgcttgcattacttcaagagcttgtggaactgtctggatgttctcattgtt
gtgttgagtgttgttgcgatcatcatgaacataaccagaaccgccatggttggcaaccat
cttaaaggcctgttggagaaccacactgctcaccccagctttgagcatttggccaacctg
caggtccagttcaacaacgtggccgcggtcatcgtctttttttcctgggtcaagcttttt
aagttcatcaacttcaataagaccatgagtcagctgtctggcaccatgtctcgctgtgcc
aaagaccttgttggttttgccatcatgttcttcatcatcttcctggcgtatgctcagcta
gcctatctggtgtttggaactcaagtcaatgatttcagcactttccaagccagcatattt
actcagttccgtatcattctgggagactttgagttctcagaaatagaggaggcgaatcca
gttctcggacctatctactttacaacctttgtattcttcattttctttattcttatgaac
atgttcctggccatcattaatgacacttactctgaggtgaaggccgacatgtcccagcag
aggactgagatggaaatgtctgatctcattaaaaagggttgtaacaaagctttgatgaag
ttgagactgaagaagacggcagtagacgacatctcggacagtttacgccaggccgggggc
aaactaaacattgatgaactccgccaggaccttaaaggaaagggccacacagacgcagag
attcaggccatctttgccaagtatgatcgcgatggcgaccaggagctgacggagcatgaa
caccagcagatgagagacgacctggagaaagagagagaggacttggatctggaacgcaat
tcgctgactagacccagcagcgggcggagcttccctcgtacccaggacgactcggaggaa
gatgatgacgaggatagcggccacagctctcgacgccgtggcagcagctcagggggggtc
tcctatgaagaatttcaagtgctggtgagacgtgtggacaggatggagcactccatcggc
agcatagtgtccaagatagatgccgtgatcgtgaagctggaaactatggagagagctaaa
ctcaaaaggagagatgtgctcggcagactgctggatggagtcatggaggatgagcgtctg
ggacgggacacagacgtccacagggagcagatggagaggctggcaagggaggaactggag
cgatgggagtctgatgatatggtctcacaggtcagccacctgcagcccgccactcccgtc
ggcccccggccgcgcccatcctcctccctgtccaccgacggcctcgacacaagcacaaac
gggggcagccatgtgtga
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