Etheostoma cragini (Arkansas darter): 117958744
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Entry
117958744 CDS
T07493
Symbol
samd1a
Name
(RefSeq) sterile alpha motif domain containing 1a isoform X1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117958744 (samd1a)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
117958744 (samd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
117958744
NCBI-ProteinID:
XP_034751234
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Position
15:11283447..11291718
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AA seq
419 aa
AA seq
DB search
MSESKYREWILDTIDSLRSRKARPDLERICRMVRRRHGSEPDRTCAELEKLIQEQTVLKV
NYKGSISYRNAAKVQRRSRKKDDVTLTTAARRSAVEEASHSDLSNGDSAFGPVDQDEEDL
EADTSLAMDTDSNADEEGADESRDGQERPSPGRAHKDASVHCASVRAVSAPCSPSGSRPG
PGPASGLDSASFQKAGERPSSLPPSSPRALTHNDWSYHSAVCPAERQHPGMQRDKAVAAA
MKPAIHSATTSPVALKTNVKKEDEGKAVDSGLSPDQLVPDSAAGLDETRNVSDGRPQALS
LPSDICTLKNKIDLPSVTAAEDCLLNGGKGDEVFVKKETMSQNLMQWTVADVASYFSAAG
FPDQAVAFRTQEIDGKSLLLMQRSDVLTGLSIRLGPALKIYERHVKVLQRTHFLEYEDL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatctaagtaccgcgagtggatcctggacactatcgactcgctgcggtcgcga
aaagcccggccggacttggagaggatttgccgaatggtccggagacgacacgggtccgag
cccgaccgaacctgcgcagaactggagaaactgattcaagaacaaaccgtgctgaaagtt
aactacaagggttctatttcataccgaaacgccgccaaggttcagcggagaagcagaaaa
aaagacgatgtaacgttaacgacggctgcgagaaggagcgcggtggaagaagctagtcat
tctgacttgagcaacggggacagcgctttcggtcctgtggaccaggacgaggaggatttg
gaggctgacacatctctggcaatggacacagacagtaatgcagatgaggagggggctgat
gagagccgggatgggcaggaaagaccctctcctggccgcgcacataaagatgcctccgtg
cactgtgcctctgtgcgagccgtctctgccccctgctccccatctggctctcgccctggc
cccggccctgcctccggtctggactcggcctctttccagaaggctggtgagagacccagc
tccttgcccccctccagccccagggccctcacacacaatgactggtcctatcattctgct
gtctgcccagcagagcgccagcacccaggaatgcagagagacaaagcagtagcagcagcc
atgaagccagcaatccactctgcaactaccagccccgtcgctttaaagaccaacgtgaag
aaagaagatgaaggcaaggcggtggacagtggcctttcgcctgaccagttagtaccggac
tctgcagcagggctggatgagaccagaaatgtatctgacggaagaccacaggcactttct
ttgccatctgacatctgtacattaaagaacaagatagatctaccctctgtcacagcagcc
gaagactgtcttctgaatggtggtaaaggggatgaagtctttgtgaagaaggagacgatg
agccagaacttaatgcagtggactgtggcagatgtggccagttacttctcagctgcaggc
tttccagatcaggctgtggcgtttcgaacacaggagattgacgggaagtcccttctccta
atgcagcgcagtgacgtgttgactggtctgtctatcaggctcggccctgcactcaaaatc
tacgagcgccatgtaaaggtgctgcagaggacccacttcttggaatacgaagacctctga
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