Etheostoma cragini (Arkansas darter): 117958819
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Entry
117958819 CDS
T07493
Symbol
tsc2
Name
(RefSeq) tuberin isoform X1
KO
K07207
tuberous sclerosis 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04115
p53 signaling pathway
ecra04140
Autophagy - animal
ecra04150
mTOR signaling pathway
ecra04218
Cellular senescence
ecra04910
Insulin signaling pathway
ecra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
117958819 (tsc2)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117958819 (tsc2)
09143 Cell growth and death
04115 p53 signaling pathway
117958819 (tsc2)
04218 Cellular senescence
117958819 (tsc2)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117958819 (tsc2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117958819 (tsc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecra01009
]
117958819 (tsc2)
Protein phosphatases and associated proteins [BR:
ecra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117958819 (tsc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
Motif
Other DBs
NCBI-GeneID:
117958819
NCBI-ProteinID:
XP_034751322
LinkDB
All DBs
Position
2:complement(22934598..22958662)
Genome browser
AA seq
1877 aa
AA seq
DB search
MHKQPSKESLRDKVKGIFGLRPPSKQNESRPSEFIITTDIIKELQPDCGLNNRVRVMNHV
CDLAKTKKFEEHAVEAVWKAVEDMLTPEQPPEARHAVLQLLRAIIQGQGERLGPLRAYFF
KVIQDYQPCNEDLSDRLEVFKALTENGKDITYLEEDIARFVLLWMNIGLTSDFLHVLVNL
VKFNSCYLDQNVSTMVQKICFLCNRTTSSTDIEVALQVLDAVVCYNCLPSDSLTVFIITL
CRTVNVKEFCESCWKLMRKVLGTHLGHSAIYTMCRIMEERVYMEDAPLLRGAVFFVGMAL
WGAHRLPALKNTPTLVLPSFYKAMSCANEVVSYEIVLSITRLIKKYGKELQVVTWDILLG
IIERLLQQIQTIGSAELKAIVYELLTTVEELYEQNGFHGSTEKFFILVEKCSDKRPDASV
LTLISYRAQSIQPAKDGWIQSLHRLMEKFFRNETRSVIRIKVLHILSFVLSTNRQLYEDE
LIEMVVIPQLSGIAEDRDLAVRKQATQLLVDLAEGCNTHHFTSLLDIIERVSSRSMVCSG
SLEVSERDPTAESPMEDVRTAILGLLEILQSKLYSLPASHAGRVYELLISHLLLHYKSKY
CSAIASSIRLQVFDFFLMVRADSLHRLGVPNKDGAMRFSPYCYCDTGEPEKHASEKKPAG
STSPPAGNPAPPTAPSTSTASIRSAYLPYAPAFSVLLQCLKMETDWKVLKLVLDKLPWTL
QYKVLLLTSPCSLDQLCSTLCCMVTDRLISERLKKTPEGFSRTDVQLAVVPVLTAITSYH
NYLDQSRQRELVQCLETGLIYRCAKQCVVALTMCTVEMPDIMIKLLPALIVKLTHISATV
AMASPMLEFLSTLVRLPHLYANFVAEQYVSVFAISLPYTNPSKFNQYIVSLAHHVIAMWF
IRCRLPFRKDFVQYITKGLRSNALLPFDDGHEQSSFRARSTSLNERPKSLRATKVAKTAA
AVANSSSSPVKELRDLSAMDAFRSRSISVSEHAVRRMHTSTTTCSLGSADESAVTQADEG
LKTVHLELTETCLDMMARYVFSNFSALPKRSPIAEFLLAGGRSMTWLVGNKLVTITTSGG
VRTQALLGLDVAERLGGGGEMTRSDPSLHTRITKEAPAKLESQSSQQHNRRIRYRSMSGG
HALRASPAQSLSPLVSPSEGELAAPLSPPSASTLDGLGPPSSSSAIPPAPQPLKDNPTLA
EFVPMLTQGWAEIFIRRPSGNTSWLMCLENPPSPFSSELGNMPLQELSTVLMAMEGVKEP
PTQTASAPASTAAPAPAAPAPAAPAPAAISEPLTQTHSSVGGKANLMQRSNTDSVVVLEE
GSGLPTAHTPTDWLENEEFEAMTSDHIFMSADKSTKTPQPATLSRSSSTSSQDDEKSTLE
EVSEGAIPIDQPTMGPSTPGSQGPELPFQTHTQTQGHGLNKSSSSPELQTLPEVISKAAL
ESETAPGDTPWPVAPSDVKPQTQQPHFEKEKVEGSPEEDVNGLGGQSQGGEVPGVVSSQS
GGARMRLEFPAAPVQPGPISPSGGHRPRGHTISVSAPSSRRERRTERDSYHSRPGPSTTE
KISGLSPSFVFLQLYHSPFFGNEANKPLLLPKTQVIDRAVKVLDQMPPYDTHKIGVVFVG
AGQVNNEVAILSNEYGSNRYAAFLTGLGKLIHLKDCDPDQIFLGGLDQYGDDGEFTYCWH
DDIMQAIFHIATLMPNKESDKGCCNKKRHIGNDFVMVVYNDSGEEYKLGTIKGQFNFVEV
IIKPLDYECNLVTLQCRKDLEGLVDTTVAKIVSDRNLPLLVRQMALHANMASLVHQYRAN
PSDAYASKWLARLRHIKRIRTRAQEDIQSRATPAISLTQGHTQQNKSFQQSTSAQNQEAS
GQRKRLVSTVDDFTDFV
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atgcataaacaaccgagcaaggagagtcttagggacaaggtgaaggggatctttggtttg
cggccaccgagcaaacaaaacgaaagcagaccatccgagtttatcattacaacggacatt
atcaaggagcttcaacccgactgcggtctgaataaccgtgttcgagtgatgaaccacgtc
tgtgatcttgccaaaacgaaaaaatttgaggagcatgcagtggaggctgtctggaaagct
gtggaggacatgctgactccagagcagcctccagaggccagacatgctgtcctgcaactg
ctaagggccattatacagggacagggtgagcggctcggccctctgagggcctactttttt
aaagtcatccaagactaccaaccgtgtaacgaggacctctctgataggctggaagtcttc
aaggccttaaccgagaacgggaaagacattacttacctggaagaggacatagcacgcttt
gtcctcctgtggatgaacataggtctcacctctgactttctccacgttcttgtaaatctg
gtgaagttcaacagctgctacctggaccaaaatgtctccaccatggtccagaaaatctgt
ttcctgtgcaatagaaccacatcttcaacagacattgaggtggcacttcaagtactggat
gcagtggtgtgttacaactgcctgccctcagactctctcactgtcttcatcatcacactc
tgtcgtactgtcaatgtcaaggagttttgtgaatcctgctggaagttgatgaggaaggtg
ttggggactcaccttggccacagtgcaatttataccatgtgccgcataatggaggagaga
gtgtacatggaggatgcaccattgttgagaggagctgtattctttgttgggatggcactg
tggggcgcacacagactccccgccctcaaaaacacacctacactagttctaccatctttc
tacaaggctatgtcgtgtgccaacgaagtggtgtcctatgaaatcgtcctctccatcacc
agactgatcaagaagtatggcaaagagctgcaggtggtcacctgggatatcctgctggga
atcatagagcgactgctgcagcagatccagacaataggcagtgcggagttgaaggccatc
gtgtatgagctgttgaccacagtagaggagctgtacgagcagaatggattccacggctcc
acagagaagttcttcattctggtggagaaatgttctgacaagagaccggatgcatcagtg
cttaccctcatttcgtacagagcccagtctatccagcccgccaaggacggctggattcag
agccttcaccgcctcatggagaaattcttcaggaacgagactcgcagcgtgataaggatc
aaggtgcttcatatcctgtccttcgttctcagtaccaaccgacagctctacgaggatgag
ttgattgaaatggtggtgatcccccagctcagtgggatagctgaagaccgggacctggcc
gtccgaaaacaggccactcagctattggtggacctcgctgagggctgcaacacacaccac
ttcaccagcctgctggacattattgagcgggtgtccagtcgctctatggtgtgttcgggt
tccctggaggtttctgagagagatcccacagcagagtctcctatggaggacgtcaggact
gccatactaggcctgctggaaatcttgcagagcaagctttacagcctaccagccagtcac
gctggtcgtgtgtatgagttgcttataagccacttgctgcttcactacaagagcaaatat
tgttcagctattgcctccagtattagactacaggtgtttgacttcttcctgatggtgaga
gcggactctcttcaccgtctgggagtccccaacaaagacggggccatgaggttcagccct
tactgctactgtgacacaggagagccagagaagcatgccagtgaaaagaagcctgcaggt
tcaacatctcctcctgctggcaaccctgctccccccactgctccttccacttcaacagcc
tcaatacgctcagcctacctgccctacgcacctgcctttagtgtgctcctgcagtgcctc
aagatggagaccgattggaaggtgctgaagctggttctcgacaagctgccatggacgctg
cagtacaaagtgctgctgctcacgtcaccatgcagtttggaccagctctgttctacactc
tgctgcatggtgacggatcggctgatctcagagcgcttgaagaagaccccagagggattt
tctcgcactgatgttcagctggcagtggttcctgtcctgacagcgatcacctcctaccac
aactacctggatcaatcgagacagagagaacttgttcagtgcctcgagactggcctcatt
tatcgctgtgccaagcaatgtgtggttgctcttacaatgtgtacggtggagatgcctgac
atcatgatcaagctgctccccgccctgatcgtcaagctcacccacatctctgcaactgtt
gccatggcatctcctatgcttgagttcctctccactctggtgcgcctgccacatctgtat
gccaactttgtagccgagcagtatgtcagcgtgtttgcaatatctctaccctatactaac
ccttccaagttcaaccagtacattgtgtccctggcccaccatgtgattgccatgtggttc
atacgctgcagactcccgttccgcaaggactttgttcagtacatcacaaagggtttgcgc
tccaatgccctgttgcctttcgatgatggtcatgagcaaagttcatttcgtgcccgaagc
accagcctcaacgaaaggcccaaaagtctgcgggcaacaaaagtggcgaagacggcagcg
gcggtagccaatagcagcagctctccagttaaagagctgagggacctgtcagccatggat
gctttccgttcccgcagcatcagtgtctccgaacatgcggttcgcaggatgcacacctca
accaccacctgcagtctgggctccgctgatgagagcgcagtgactcaggcagacgagggg
ctgaagactgtccacctggagctcacagagacctgtctggacatgatggcacgatatgtc
ttttccaacttctccgccctgcccaagagatctcccatcgcagagttccttttggcgggg
ggtcgcagtatgacttggctggtgggaaacaagctggtgaccataacaaccagcggaggg
gtcagaacacaagcgctgcttggcctggacgtggctgaacggctgggaggaggaggagaa
atgacgaggtcagatccatcactacacacccgaatcaccaaagaggctccagccaaactg
gagtcacagtcgagccagcagcacaacagacgcatacggtaccgctccatgtcaggtgga
cacgctctacgtgccagtcctgctcaaagtctcagtcctcttgtgtccccctctgagggg
gagttagctgctccactctctcccccctctgcttctaccctggatggcctgggtcctccc
tcctccagctcagccataccgcctgctccacagccactcaaagacaaccccaccctggcg
gagtttgtccccatgctcacacagggctgggcagagatcttcatacggagaccgtctggt
aacacaagctggctgatgtgtctggagaacccgcccagtcccttctcctcggagctcggc
aacatgccgctgcaggagctctccactgtcctcatggccatggagggtgtaaaggagcct
cctacccagacagcaagcgctcctgccagcactgctgccccagcaccagctgccccagca
ccagctgccccagcaccagctgccatctccgagccgctaacccaaacacacagcagcgtc
ggaggaaaggcaaacctgatgcagcgttccaacactgactctgtggtggtgctggaggaa
ggctcagggcttcccacagcacacaccccaactgattggctagagaatgaagagtttgag
gcaatgacctctgatcacatcttcatgtctgcggacaagtcaacaaagaccccgcagcct
gcaacactcagcagatcctcctcaacttccagtcaagatgatgaaaagtcaacgctggag
gaagtgagtgagggtgcaattcccattgatcagcccactatgggaccatccaccccaggc
agccaggggcccgaacttcccttccagacccacactcagacccagggtcatggacttaac
aagtccagctcctctccggagctccaaaccctaccagaagtcatctccaaggctgctttg
gagtcagagactgcgccaggggacacaccgtggcccgttgcaccttcagatgtcaagcct
cagacccagcagcctcattttgagaaagagaaggtggagggaagcccagaagaggatgtt
aatggcctgggaggtcagagtcaagggggtgaagtcccaggtgtagtgtcatctcaaagt
ggaggagcaaggatgaggttggagtttccagcagcaccggtacaacctggacccatctcc
ccgagtggaggccaccgaccacggggtcacaccatctccgtgtcagccccttcctccagg
agggagaggaggacagaaagggactcgtaccacagtcgacctggacccagcaccacagag
aagatctctggactgagccccagctttgtcttcctccagctgtaccactctcctttcttt
gggaacgaagctaataagccactgctgctgcccaaaactcaggtgattgaccgcgctgtg
aaggttctggaccagatgcctccttatgacacccataagatcggagtggtgtttgtagga
gctggtcaggtcaacaatgaggtcgccattctgtcaaacgagtacggttcgaaccgctac
gctgccttccttacaggcctgggcaaattgattcacctgaaagactgtgaccccgaccag
atatttctcggagggctcgaccaatatggagacgacggagagttcacctactgttggcat
gacgacatcatgcaggctatcttccacatagccacgctaatgccaaacaaggagagtgac
aagggctgctgcaacaaaaagcgtcacattggcaatgattttgtcatggtggtgtacaat
gactctggagaggagtacaaactgggcaccattaagggtcagtttaactttgtagaagtc
attataaagccactggattatgaatgtaacctggtgaccctccagtgccgcaaagatctg
gagggattagttgacacaacggtggcaaaaatcgtttcagaccgcaaccttccactctta
gtcagacaaatggctctgcatgcaaatatggcctctttggtgcatcagtacagagctaac
ccgtctgatgcttatgcctccaagtggttagcgagattacgtcacattaagaggatcagg
accagggcccaggaagacattcagtctcgcgcgactcccgccatctctctgacccaagga
cacactcagcagaacaagtcgtttcagcagagcacttcagcacaaaaccaggaagcctcc
gggcagaggaaaagacttgtatcaacagtggatgatttcactgattttgtttga
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