Etheostoma cragini (Arkansas darter): 117958854
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Entry
117958854 CDS
T07493
Symbol
dcp2
Name
(RefSeq) m7GpppN-mRNA hydrolase isoform X1
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117958854 (dcp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117958854 (dcp2)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
117958854 (dcp2)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117958854 (dcp2)
mRNA degradation factors
5'-3' decay
Decapping complex
117958854 (dcp2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
117958854
NCBI-ProteinID:
XP_034751423
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Position
16:5022664..5033484
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AA seq
399 aa
AA seq
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MEAKRVEIPSGVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFCMQNTPGAPHC
GIRDFAKAVFHHCPFLLPHGEDVQKILEQWKEYKMGVPTYGAIILDEALENALLVQGYLA
KSGWGFPKGKVNEDEAPHDCAVREVLEETGFDIKNRICKDMFIEQKITDQVVRLYIIPGV
SKDTKFNPKTRKEIRNIEWFHIEKLPCHRNDMTPKSKLGLAPNRFFMAIPFIRPLREWIS
RLKGESTDSDEDFANNGNTSSKASDNTWSKSRRLTGGDAFPGDSWAKHKQQKAVGQASQQ
ELNQNPHLKGNGKKCLDSSYVKKGANDNGANCQQVKAIFTEVKKLQPRRLQDSFERDVAP
CSSNGHQTVHSKDSEPLLSSKIFLNFKFDREAIMKCFDY
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaagccaaaagagtggagatcccatctggcgtactggacgacctatgcagccggttc
atcctgcacatccccagtgaggagcgggacaacgctatccgggtgtgcttccagatcgag
ctggcccactggttctacctggacttctgcatgcagaacactccgggggctcctcactgt
gggataagagacttcgccaaagcagttttccatcactgtccttttctgctgcctcacgga
gaagatgttcaaaaaatcctggaacagtggaaggagtacaagatgggtgtacccacttat
ggagcaatcattcttgatgaagcactagaaaacgcactgcttgttcagggctaccttgca
aagtcaggctggggctttccaaaagggaaagttaacgaggatgaagcgcctcatgactgt
gcagttcgtgaagtgttggaggaaacgggcttcgacatcaagaatcgcatctgcaaagac
atgttcatagagcagaaaatcactgaccaagtggttcggctctacatcataccaggagtg
tcaaaggataccaagttcaaccccaaaacaaggaaagagatcaggaacattgaatggttt
catattgagaagctgccatgtcacaggaacgacatgaccccaaagtccaaacttggactt
gcccccaacaggtttttcatggccattccatttataagaccgctgcgagaatggatcagc
aggctgaaaggcgagtcaacagacagcgacgaggactttgcaaacaatggcaacacttca
agcaaagcttcagacaacacttggtcaaaatcccgccgcctcaccggtggcgatgctttt
ccaggagacagctgggcgaaacacaagcagcagaaggctgtgggccaggcgagccagcag
gagctcaaccagaatccacatttgaaaggcaatggaaagaaatgtctagactcgtcttat
gtgaagaaaggagcaaatgacaatggagccaactgccagcaggtgaaagccatatttaca
gaagttaaaaaacttcaacccagaagactgcaagacagttttgagagagatgtggctcca
tgcagctccaacggtcaccagacagtccacagcaaagactctgagcccctgctgtcctcg
aagattttcctcaattttaaatttgacagagaagctatcatgaaatgttttgactactga
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