Etheostoma cragini (Arkansas darter): 117958874
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Entry
117958874 CDS
T07493
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117958874
03041 Spliceosome [BR:
ecra03041
]
117958874
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117958874
Spliceosome [BR:
ecra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117958874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_3
RRM_Nup35
Nup35_RRM_2
Flg_new_2
Motif
Other DBs
NCBI-GeneID:
117958874
NCBI-ProteinID:
XP_034751442
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Position
16:complement(21587511..21598050)
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AA seq
387 aa
AA seq
DB search
MDDDQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
NETSNSKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQTMRQTFSPFGQIMEIRVFPDKGY
SFVRFSSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVSPIQQVQLPQQNTVSFAAQP
YSQWGQWYSNTAAQQIGQYVPNGWQVPSYGVYGQTWDQQGYNPLHAGAGWTGVGAVSNGS
MVEPGQGVNGTVLTNQAGMSAAGYHTH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaccagcccaaaaccctgtatgtggggaatctgtcccgggacgtgacagag
gccctcatcttggagttgtttgggcagattggaccctgcaagagctgtaaaatgatagta
gatacagcaggtcatgatccgtactgctttgtggagttctatgagcatagacatgccact
gccacaattgcagccatgaatggtcggaaaatactgggtaaggaggtcaaggtcaactgg
gccacgacgccaaccagccaaaagaaagacacaagcagtcacttccacgtctttgttgga
gatcttagtcccgaaatcaccacagatgacatcaaagcagcttttgctccatttgggaaa
atatcggattgtcgagtggtgaaagacatggccacaggtaaatctaaaggctatggcttt
gtctccttcttcaacaaatgggatgcggagaatgccattcagcagatgggaggccagtgg
ctgggaggaaggcagatcaggaccaactgggccacaaggaagcctgctcctaaaactaca
aatgagacatccaattccaagcagctatcttttgatgaggtggtcaaccagtcaagcccc
agcaactgcaccgtctactgcgggggagtcacaacaggtctcacagagcaaaccatgaga
cagaccttctcacctttcggccaaataatggaaatccgtgttttcccagacaaaggctat
tcgtttgtgaggttcagctcccatgaagcagcggctcatgccattgtgtcagtcaatggc
acatccatagagggctatgttgttaagtgttactggggcaaagaaacgaccgacatggtc
agccccatacagcaggtacagctgccacagcagaacacagtgagctttgcggcgcagccc
tacagtcagtggggccagtggtacagcaacacagctgcacagcagattggtcagtatgtg
cccaatggatggcaggtgccgagctacggggtctacggacagacctgggatcagcagggc
tacaatcctctacatgccggtgccgggtggacaggtgtgggcgctgtgagcaacgggagc
atggtggagcccgggcagggagtcaacgggacggtgctgaccaaccaggccggcatgagc
gctgccggctaccacacccactga
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