Etheostoma cragini (Arkansas darter): 117958911
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Entry
117958911 CDS
T07493
Symbol
rfx1b
Name
(RefSeq) MHC class II regulatory factor RFX1
KO
K09173
regulatory factor X 1/2/3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117958911 (rfx1b)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Other basic domains
RF-X
117958911 (rfx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Spc42p
DUF3156
Motif
Other DBs
NCBI-GeneID:
117958911
NCBI-ProteinID:
XP_034751573
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All DBs
Position
2:22992631..23012136
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AA seq
834 aa
AA seq
DB search
MATSGYSEDLQPQQANTVTMATPSPTTPSSTKTAHFLSEIPPTSGAIASANQSVTVSKTG
QDALCSQAPPINQKAVVLTTPTQHYVTQEIQHSAVQKSNGQSNSPQYIIVTVTEGSVHSN
DSLSDSSPPATGVPTQVVQPVQTTQQRSVLQAVSQAAKRIQIKNLKSGDIHQEVEHVYSG
QVQYVDGGGDATFTTSSIRSSNYPFSDSPLYSQTPPSSSSYYEATPSSESDITGSVTSQP
VSVATAGANSGGTAAGGGGYVIQGGYVLGGAAAGGGGQSYTSPNSRAPPATVQWLCDNYE
GAEGVSLPRCTLYYHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYY
GLRIKSGSPLLRLMDEQQHMAMRQQPFSQKNRIKPLQKSQGITNGTSGGMGQQQAAGLCD
ISAQVQQYQQFLEASRPLPDFVDIDLQDGTLPDGILLDHLKAFQTLYREHCEAILDVMVN
LQFTLVETLWKSFWRFSQSSDSESLNLHNESEKRLPKSCLVVLCKYEPVLRWTKECDNLL
YQTLVEILIPDVLRPIPSALTQAIRNFAKSLENWLTGAMMNIPEEMVRIKVVCVGSFSQT
LRRYTSLNHLAQAARAVLQNSAQINQMLSDLNRVDFTNVQEQASWVCQCEDRVVQRLEQD
FKMTLQQQNSLEQWATWLDGVVSEALKPYEHNPIVLPKAAKVFLLNWSFYSSMVIRDLTL
RSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGVTPIAVMGEFASTVKSRISPDLEKEEE
EDDEEEESEDEGGDLVLQSSSLRAVDDEKDTMEPPAKLSRTSFNLHSLTDSTPS
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttctggatactcagaggaccttcagcctcagcaggccaacactgtaaccatg
gcaacaccatctcctaccacaccctcatccacaaagacggcacacttcctgtccgagatc
ccaccaacctctggagccattgcatcggctaaccaatcagtcactgtctcaaaaacagga
caggacgcactttgttctcaagcgccgcccatcaaccagaaggcagtggttctgacgact
cccacgcagcactatgtaacccaagaaatccagcactctgctgtccagaaaagtaatggt
cagagcaactcgccacagtacatcatagtaactgttacagagggctcagttcactccaat
gacagcttgtcagactctagcccacctgccactggtgttcctactcaggtggtccaacca
gtgcagacaacccaacagaggtcagtgttgcaagcggtgtcgcaggcagccaagaggatt
cagattaagaacctaaagtctggggacattcaccaggaggtggagcatgtgtactctggc
caggtgcagtatgtggacggaggaggagatgcaacttttaccacgtcctccattcgatcg
agcaactaccctttctccgactcgcccctctactcgcagacccctccctcctcgtcctcc
tactacgaggccacacccagctctgagtcagacatcactggctctgtcacctcgcagccc
gtttctgtggcaacagcgggagccaatagcgggggaactgctgcaggcggagggggctat
gtcattcagggaggttatgtgttaggaggagcagcagcaggtggaggaggacagagttac
accagccctaactctcgtgccccacccgctactgtgcagtggctgtgtgataactacgag
ggggcagagggggtgagtttacctcgctgcaccctctactaccactacctgctgcactgc
caggagcagaaactagaacctgttaatgctgcatccttcggcaaactcatcaggtctgtc
tttatggggttgcgtacacggagattagggaccagagggaactctaagtaccactactat
ggactgaggatcaaatctggttccccgctgctcaggctgatggatgaacaacagcacatg
gcgatgaggcagcagcctttctcacagaaaaacaggataaagccacttcagaagtcacag
gggatcaccaatgggacatcaggtgggatgggtcagcagcaggcggcgggactatgcgat
atttcggcgcaggtgcaacagtaccagcagtttctggaggcatcaaggccgctgccagac
tttgtggacattgatctgcaagatggaaccctgcccgatgggatccttttagatcacctc
aaggcctttcagactctctacagggaacactgtgaggccatcctggacgtgatggtcaac
cttcagttcactcttgtggagacactttggaaatccttctggcggttcagccagagcagt
gacagtgaatcacttaacctgcacaatgagtctgagaagcgtctgcccaaatcgtgcctg
gtggtgctgtgtaagtatgagccagtgctgcgctggaccaaagagtgtgacaacctgctc
taccagactctggtggagatcctcatccctgatgtactgagacccatccccagtgcctta
acccaggccatccgcaactttgccaagagtctggagaactggttgacaggcgccatgatg
aacatcccggaagagatggttcgcataaaggtggtgtgtgtgggctccttctcccagacg
ctgcgccgctataccagcctgaaccaccttgcccaggcagcccgcgccgtcctccagaac
tccgcccagatcaaccaaatgctctcagacctcaacagggttgatttcacaaatgtacag
gagcaggcatcctgggtatgtcagtgtgaagaccgtgtggtacagaggctggaacaagac
tttaaaatgaccctgcagcagcagaactctctggagcagtgggctacctggctggatggc
gttgtctctgaagccctgaagccctacgagcacaaccctattgttctcccaaaagctgca
aaggttttcctgctcaactggtccttctatagctctatggtaatccgggacctgactttg
cgcagtgctgccagctttggctcctttcacctgatccgcttgctgtatgatgagtatatg
tactacctgatagaacaccgggtggcccaagctaaaggagtaacacccattgcggtcatg
ggagaatttgcaagcactgtcaagagccgaatctctccggacctggagaaagaagaagag
gaggatgacgaggaagaggaaagcgaggacgagggcggagatctcgtgctgcagtccagc
tcgctgagagcggttgatgacgagaaggacacgatggagccgcccgccaagctgtccagg
accagtttcaatctgcactctctgaccgacagcaccccatcttag
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