Etheostoma cragini (Arkansas darter): 117958980
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Entry
117958980 CDS
T07493
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00310
Lysine degradation
ecra00514
Other types of O-glycan biosynthesis
ecra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117958980
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117958980
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ecra01003
]
117958980
Enzymes [BR:
ecra01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
117958980
Glycosyltransferases [BR:
ecra01003
]
O-Glycan biosynthesis
O-linked Gal type
117958980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
MT-A70
Motif
Other DBs
NCBI-GeneID:
117958980
NCBI-ProteinID:
XP_034751694
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All DBs
Position
2:22171041..22181657
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AA seq
609 aa
AA seq
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MPRVASLLSALLFVLLPGSSWGYFPEERWSPESPLLAPRVVVALVCRNSAHSLPLFLGAI
QRLNYPKDRIALWVATDHNIDNTTAILRDWLVKVQNDYHYVEWRPEDEPSSFEDEMGPKH
WNNLRYEHVMKLRQAALETAREIWADYLLVADCDNLLTNTDILWKLMSENKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYMPIRKQERLGCFAVPMVHSTYLVDLQKDASRQLAFYP
PHPEYSWALDDVIVFAHSARMAGVQMYVCNKEIYGFFPVPIRSHGTLQDEEESFVHTHLE
VMVKNPPLEPSSVLSLPPKQPNKMGFDEVFMINLVRRSDRRERMLRTLYEQQLSCKVVAA
VDGKALNKSDIESMRIKMLPGYKDPYHGRPLTKGELGCFLSHYNIWTEIVDRGLQTSLVI
EDDLRFEVFFKRRLQALLEEVTTHKLDWDLIYIGRKRMQVDHQEKSVPNIHNLVEADYSY
WTLGYLLSLQGAQKLLRAEPLTKLLPVDEFLPVMYNKHPVSEYMDHFESRDLRAFSAEPL
LVYPTHYTGDQGYISDTETSVVWDNETVKTDWDRAKSRKTQEQGELSFEAQNSDVLQSEL
ENWSARDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgccccgggtcgcctcgctgctgtctgccctgctgttcgttctcctgccgggctcgagc
tggggatatttccccgaggagcgctggagccccgagtctccgctcctcgctccccgggtc
gtcgtcgcactggtctgccgcaactcggcgcactctctgccgctgttcctgggagccatt
cagcgtctcaactacccgaaggaccgcattgcgctgtgggtggcgacagatcacaacata
gataacaccacagccatcctgagagactggcttgtcaaggtgcagaatgactatcactat
gtggagtggagacctgaagatgaacccagttcctttgaagacgagatggggcctaagcac
tggaataatctccgctatgaacacgtaatgaagctccgccaggcagcgctggagaccgcc
cgtgagatctgggctgactacctgctggtggctgactgtgacaacctgctcacaaatacg
gacatattgtggaaactgatgagtgaaaacaagacaattgtagcgccaatgctggagtcc
agagccgcatactctaacttctggtgcgggatgacttcacagggttattacaagcgtaca
ccagcctacatgcctatccgtaagcaggagcgtcttggctgttttgctgtaccaatggtc
cactccacctacctagtggacctacagaaagacgcctcccgtcagctggctttttatcca
ccacacccggagtacagctgggccctggatgatgtcatcgtctttgcccactcagctcgc
atggcaggtgtgcagatgtacgtctgcaacaaagagatttatgggtttttcccagttcca
attcgttcccatggcaccctacaggatgaggaggagagctttgtgcacactcaccttgag
gtcatggtgaaaaatcctccactggagccttccagcgtcctgtctcttcctccaaagcag
cctaacaagatgggctttgatgaggtgtttatgataaatctggtgcggagatctgaccgt
cgcgagcgaatgctaagaactctgtatgagcagcagctcagctgtaaggttgttgccgct
gtggatggcaaagctctgaacaagagtgatatagagtctatgaggattaagatgctgccg
ggttacaaagacccttatcatggtcggcctctcaccaaaggtgaactgggttgtttcctc
tctcattacaacatctggacggagatagtagaccgtggtctgcagacctccctggtcatc
gaggacgacctccgcttcgaggtgttcttcaagcggcgtctccaggcgctactggaggag
gtgacaacacacaagctggactgggatctgatttacatcgggcggaagcgaatgcaggtg
gaccaccaagagaagtctgtaccaaacatccacaatctggtggaggcagactactcctac
tggacactcggctacctgttgtcattacaaggagcccagaagctccttagggccgaacca
ctgaccaagttgctacctgttgacgagttcctccctgtcatgtacaacaaacatccagtt
tcagagtacatggaccactttgagagtcgggacctgcgcgcgttttcggccgagccgctt
ctggtgtatccgacccattacacgggagaccagggctacatcagtgacacggaaacatcg
gtcgtttgggacaacgagactgtcaaaaccgactgggaccgagccaagtcgaggaaaact
caggagcagggggagctgagctttgaggcccagaactctgacgtcctgcagtctgaactg
gagaactggagcgcacgggacgagctgtga
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