KEGG   Etheostoma cragini (Arkansas darter): 117959018
Entry
117959018         CDS       T07493                                 
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
  KO
K24738  rabconnectin-3b
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    117959018
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecra04131]
    117959018
Membrane trafficking [BR:ecra04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    117959018
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_EML EIF3I ASA1 CFAP251_N Beta-prop_VPS8 Beta-prop_WDR41 ANAPC4_WD40 Beta-prop_ACSF4 WD40_MABP1-WDR62_2nd Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_NOL10_N Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_WDR19_1st WDR90_beta-prop_4th WDR72_alpha-sol Beta-prop_TEP1_C Tricorn_2nd PD40
Other DBs
NCBI-GeneID: 117959018
NCBI-ProteinID: XP_034751741
LinkDB
Position
16:complement(2689653..2826674)
AA seq 1496 aa
MSGNNLILPIVLWGRTAPTHCISSLLVMDDFSTIITGCHDGQICLWDMTPELEICPRAML
FGHTASITCLSKASACSDKQYIVSASESGEMCLWDVNDGRCIEFTKLACAHTGIQFYQFT
IGTEREARLLCNGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAV
SVTGILKVWIITAEVSRIQDLDPVFEEESKPIYCQGCQSISFCTFTQSSLLVVCSKYWRV
FDAGDYSLLCSVSSDSDQAWTGGEFIAADKVIIWTEDGCSYIYKLPASCLPASEHFRSDV
GKTKEGSIPPLVYSIADRLDKQLLICPPVTRFFFGRREPLHKLLIQGDSAGRLSLWSIPD
TSPLQPLSKATELQVSSTISLQEAFDKLTPVSAGIIDQLSALPGKDGPIKVTASVYIPSQ
GRLVCGREDGSIILVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCVLYPYQISP
RYDQRSLVSGGVDFSVIVWDIFTGEMKHIFCVHGGEITQLIVPPENCSTRVQHCVCSVAS
DHSVGLLSLRERKCIMLASRHLFPIQVIKWRPADDYLVVGCSDGSVYVWQMDTGALDRCV
MGITAVEILNACDELAPATVDALSHSAVNLKQAMTRRSLAALKNMAQHKLQTLATNLLAA
DNADKGNLPKYSHNALVVQAMKTNLTDPDMHVLFFDVEAVIIQLLTEEAQRPSPTLVSPE
TLQKSQAGADKGGSFLANKIFKQVKETMKETIKEHLLDEDEEEEEEMRRREEKSKSLSLL
EYNLTMDTAKLFMSCLHAWGLNEQLDGICLDRLGMLRPHCPISFGLISRGGHMSLMLPTF
KESLLQQLSLATGLKLTLTDIVGKGTYGVSRAVTTQHLLSVISLANTLMGMTNATFVGEH
MKKAPVRPPRPGGTPETPRRTLAAPHQPSNPALQAQIKQAAVAATANTSTVTTATTAGAP
GAPGVFSQRAPGSQSPASYNIPSVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRW
QDRCLEVREAAQALLLAELRRIGQSGRKDTIDLWAPYLPQYVDTVSSPGSSTEPSPPAPP
PPEAQPIETKVPEEEMDVTDDDITAGCLSNLPPNAKKISNSYEERRKQATAIVLLGVIGA
EFGAEIEPPKGSARARAGGQAPEGFGLTSGGSSNYSLARHTCKALTFLLLQPPSPKLPPH
STIHRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANVTMGLPLNPPADSARS
ARHALSLIATARPPAFITTIAREVHRFNAAQANSQSQQNVHTTTLARAKTEILRVIDILI
EKMPGDVVDLLVEVMDIIMYCIEGSLVKKKGLQECFPAICKFYMVGYCDRSHRIAVGARQ
GSVALYDVRTGKCQNIHGHKGPITAVSFAPDGRYLATYSNADSHISFWQMNTSLLGSIGM
LNSAPQLRCIKTYQVPPVQPASPGSQNHLKLARLIWTSNRNVILMAHDGKEHRFMV
NT seq 4491 nt   +upstreamnt  +downstreamnt
atgtcggggaacaacttgattctgcccatagtgctctggggccgcacggctcccacccac
tgcattagcagtctgctggtgatggacgacttcagcaccatcattactggctgccatgac
ggacagatctgtctctgggacatgacacctgagctggagatttgtcccagggccatgttg
tttggccatacagcctccattacctgtctgtctaaagccagtgcgtgtagtgacaaacag
tacatcgtcagtgcatcagaaagtggagagatgtgtttatgggatgtgaacgatggacgc
tgtattgagttcaccaagctggcctgtgctcacactggcatacagttctatcagttcacc
atcggcactgagagggaggcacgtctgctatgcaatggccactacccagaaatccttgtg
gtggatgccaccagcctggaggtcctgtactccctggtgtccaagatctctcctgactgg
atcagctccatgagcatcatccgatcccaccgaacacaagaggacacagtggttgcagtg
tcagtgactgggattttgaaggtctggatcatcacagctgaggtcagcaggattcaggac
ctggaccctgtgtttgaagaagaatccaaacccatctactgtcagggatgtcagagtatt
tccttctgtacatttactcagagcagcctgctggttgtctgctccaagtactggagggtg
tttgatgcaggcgactactcgttgctctgctcagtgtccagtgacagcgaccaggcctgg
accggaggagagttcatcgccgcagacaaagtcatcatctggaccgaagacggctgcagt
tacatctacaagctgcctgccagctgcctgcctgctagtgaacacttccgcagtgatgtt
gggaaaaccaaagaaggctccatcccgccgctggtctacagcattgccgaccgtttagac
aaacagctcctgatctgtcctcctgtgactcggttcttcttcggccgacgagagcccctc
cataagttgctgatccagggggactcagcgggcagactgtccctgtggagcatcccagac
acctcgcctctgcagccgctgtcgaaagctacagagttgcaggtgtcgtccaccatcagc
ctccaggaggcgtttgataagttgacccccgtgtctgcagggatcattgaccagctaagt
gctcttcctggaaaagatggacccatcaaggtgacagccagcgtgtatatcccatctcag
ggtcgcctggtgtgtgggagagaagacggtagcatcatcctggttcctgccactcagacc
gccattgtccagctgctgcagggggagcacatgctcaggagaggctggccgccccatcgt
accctgcgaggtcaccggaacaaggtgacgtgcgtcctgtatccgtaccagatctccccc
cgctacgaccagcgctcgctggtgtctggaggagtggacttctccgtcatcgtctgggac
attttcaccggagagatgaagcacattttctgtgtccacggaggagagatcacccagctc
attgtcccacctgaaaactgcagtactcgggtgcagcactgcgtgtgctcggtggccagt
gaccactccgttggcctgctcagtctcagggagaggaagtgcatcatgctggcgtcgcga
cacctcttccccatccaggtcatcaagtggcgtccagcagatgactacctggtggtggga
tgctctgacggctccgtctacgtctggcagatggatacaggagctttggaccgctgcgta
atgggcataacagcagtagagatcctgaatgcctgtgacgagctggctcctgccactgtg
gacgctctgagccactcggctgtgaacctgaagcaggcgatgactcgccgcagcctggcg
gcactgaagaacatggcacagcacaaactgcagacactcgccaccaacctgctggctgca
gacaatgccgacaagggcaacctgccgaaatattcccataatgcccttgtggtccaggcg
atgaagaccaacctgacagaccctgacatgcacgtgctgttcttcgacgtggaggcggtg
atcattcagctgctgacagaggaagcccagagaccgagtcccacgctggtgtctccagag
acgctgcagaagagccaggctggggctgacaagggggggtccttcctggccaacaagatc
ttcaaacaggtgaaggaaacgatgaaggagaccatcaaggagcacctgttagacgaagat
gaggaggaggaggaggagatgaggaggcgggaggagaagtccaagtctctgagtctgctg
gagtacaacctaacgatggacacggccaaactcttcatgtcctgccttcacgcctggggt
ctcaacgaacagcttgatggcatctgtctggaccgactgggcatgctcagaccgcactgc
cccatctcctttggcctgatttctagaggaggtcacatgtcccttatgctgcctaccttc
aaggagtccttgctgcagcagttgtccctggcgactggtctgaagctgactctgaccgac
atcgttgggaaggggacgtacggcgtttcaagggccgtcaccacgcaacacctgctgtct
gtaatctcactggccaacactctgatgggcatgaccaacgccacctttgttggagagcac
atgaagaaagcaccagtcaggcctcccagaccgggaggaaccccggagactcctcgcagg
acactggctgccccccatcagccctccaaccctgcactacaggctcagatcaaacaagct
gctgtagctgccacagccaacaccagcactgttactactgctaccactgctggggctccg
ggggcccctggggtcttttctcagagggcccctggctcccagagccccgcttcttataac
atcccctcagtcaacgaaggttggagccagctggcagccatgcattgtgtgatgctccct
gacctccttggactggacaagtttagacctcctttgctggagatgttggcaaggagatgg
caggaccgctgtctggaggtgcgagaagcagcacaagctctcctattggctgagttgagg
aggattggccaatccggacgtaaggacaccattgacttgtgggctccctaccttcctcag
tatgtggacaccgtcagctcccctgggtcgagcactgagccctcccctccagctccgcct
cctccagaggctcagccaatagaaacgaaggttcctgaagaagaaatggacgtcacggat
gatgacatcacagcaggatgtctgtccaaccttccaccaaacgccaagaaaatctccaac
tcgtatgaggagcgccgtaaacaagccaccgccatcgtgctgctgggggtcatcggggcg
gagtttggcgctgagattgaacctccaaaggggtcagcacgggcccgagccggcggacag
gcgcccgaaggcttcggattgacaagtggagggtcatccaactactcactggccaggcac
acatgtaaggcgctgaccttcttgctgctgcagccccccagccccaagctgcctccccac
agcaccatccaccgcaccgccatcgatctgattggccgaggcttcaccgtgtgggagccg
tacatggacgtctcagcggtgctcatggggctgctggagctctgtgctgacgccgagaag
cagctggccaatgttaccatgggtctgcccctcaacccgccagcagattccgctcgctct
gcccgccatgccctctctcttattgctacagctcggccaccggctttcatcaccaccatt
gcaagagaggttcatcggttcaacgcagctcaggcaaactctcagtctcagcagaatgtt
cacaccaccactctggccagagccaagactgagatactgcgagtgattgacatcctgata
gagaaaatgcctggcgacgttgtggatctgctggtcgaggtgatggacatcatcatgtac
tgtattgaagggtctctggtgaagaagaaaggactgcaggagtgtttccctgctatttgc
aagttctacatggttggttactgtgaccgcagtcaccgcattgctgtgggagctcgccag
ggttcagtggccctctacgatgtccgtaccggaaaatgccagaacatccacggtcataag
ggtcctatcacggcagtgtcattcgcccctgatggccgttacctggcaacgtactcaaat
gctgacagccacatctccttctggcagatgaacaccagtctgctgggcagcatcgggatg
ttgaactcggcccctcagctccgctgcattaagacctaccaggtccctcctgtgcagccg
gcgtccccgggctcccagaatcacctgaagctcgcccgcctcatctggacctccaaccgc
aacgtcatcttgatggcccacgacggcaaggagcaccgcttcatggtctaa

DBGET integrated database retrieval system