Etheostoma cragini (Arkansas darter): 117959053
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Entry
117959053 CDS
T07493
Symbol
cercam
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00310
Lysine degradation
ecra00514
Other types of O-glycan biosynthesis
ecra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117959053 (cercam)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117959053 (cercam)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ecra01003
]
117959053 (cercam)
Enzymes [BR:
ecra01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
117959053 (cercam)
Glycosyltransferases [BR:
ecra01003
]
O-Glycan biosynthesis
O-linked Gal type
117959053 (cercam)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
117959053
NCBI-ProteinID:
XP_034751791
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All DBs
Position
16:complement(12148056..12157601)
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AA seq
591 aa
AA seq
DB search
MLFHFLVLGALVFQSECYFSEEMYPEESKMQLPTVVFVIIARNSAHSLPYYLGALERLNY
PKDRISVWAATDHNSDNTTAILKEWLTVMQKFYHYVEWRPMDQPTSYAGELGPKHWPNTR
YEYVMKLKQAALNFARKRWADYILYADTDNILTNPETLNLMIAENKSAIAPMLDSQGAYS
NYWCGITPQGYYRRTAEYFPTRHRHRLGCFAVPMIHSTMLLDLRKEGMKKLAFFPPHKDY
SWPYDDIIVFAFSCRAAEVQMYLCNKERYGYLNVPAKPHQTLEDDRLNFVHVQLESMIDG
PPMHPSRYVHMFPKQRDLLGFDEIYLINLRRRPDRRDRMLYSLNELEIDVKVVDAVDGNA
LNSSDIKLLGVDLLPGYYDPFSGRTLTKGEVGCFLSHYFIWKEIVDLQMDKALLFEDDVR
FQANFKRRVLRLMEEVELVELDWDIIYFGRKHVNPVKEEAVENVHNLVKADYSHWTLSYA
ISLQGAQKLLNAEPLSKMLPVDEFLPIMYDKHPNEDYKSHFLNRNLEAYSTHPLLVQPCH
YAGDPQWVSDTETSTLWDDDAVHTDWRGSHKTLKGAAPAPDMLSASYRDEL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgttatttcactttctagttttaggggccttggttttccagtctgaatgttacttttcg
gaggaaatgtatccggaggagtcgaagatgcagcttcctacggtggttttcgttatcata
gcccgaaacagtgctcactccctgccctactacctcggagctctggagagactcaactac
cccaaagatcgcatctctgtgtgggcagccactgatcacaattcagataacaccacagcc
atactgaaagagtggcttactgttatgcagaaattctaccattatgttgagtggagacca
atggaccagccaacgtcctatgcaggagagttgggtcctaagcattggcccaacaccaga
tatgagtatgtgatgaagctgaagcaggcagcactcaacttcgccaggaaacgctgggcc
gattatatcctgtacgctgacacagacaatatcctcaccaacccagaaaccctcaacctg
atgatagcagagaacaagtcagctatcgctcccatgctcgactctcagggagcatactcc
aactactggtgtggtatcactccacagggatattatcgacgaacagcagagtattttccc
acgcgtcaccgtcacagacttggctgcttcgctgtgccaatgatccactctaccatgctg
ctggatttaagaaaggaaggcatgaagaaactggccttcttccctccccacaaggactac
tcgtggccctacgacgacatcatcgtgttcgccttttcctgccgagctgcggaggtacag
atgtacctgtgtaacaaggagcgctacggctacctgaacgtcccagccaaacctcaccaa
accttggaagatgatcgcctcaacttcgtccatgtccaacttgagtccatgatcgatggt
cctcctatgcacccctcacgatacgtccatatgttccccaaacagagagatctcttgggc
tttgatgagatatatctgattaatctgcgacggcgtcctgaccgtagagaccggatgttg
tactctctgaatgagctggagattgacgtcaaggtggtggatgctgtggatggaaatgca
ctgaacagcagtgacattaagctcctgggtgtggacctgttgccaggctactatgacccg
ttctctggccgcaccctgaccaaaggagaggtgggctgcttcctcagccactactttatc
tggaaggagatagtggacttgcagatggacaaggcgctgctgttcgaagacgacgtccgt
ttccaggccaacttcaaacgacgagtcctcagactgatggaggaggtggagctggtggag
cttgactgggacatcatatactttggcaggaagcacgtgaatcccgtaaaggaggaggca
gtggaaaacgttcacaacttggtaaaggccgactactcgcactggactctgtcctacgcc
atctccctgcagggtgcccaaaaactgctcaacgctgagccgctgtccaagatgcttcct
gtcgatgaattcctccccatcatgtatgacaaacatcccaatgaagactacaagtcccat
ttcctcaacagaaacttagaagcctacagtacacacccccttttggtccagccctgtcac
tacgccggtgatccccagtgggtgagcgacacggagacgtcaacgctgtgggacgatgac
gctgtacacactgattggaggggttcccacaagaccctgaaaggggctgcgccggcaccc
gacatgctgtcagcctcctacagagatgaactttag
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