Etheostoma cragini (Arkansas darter): 117959138
Help
Entry
117959138 CDS
T07493
Name
(RefSeq) synaptic vesicle glycoprotein 2C-like
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117959138
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecra02000
]
117959138
Transporters [BR:
ecra02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
117959138
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MFS_1
LD_SV2
Sugar_tr
MFS_2
Pentapeptide_4
Pentapeptide_3
Pentapeptide
CcdA
Motif
Other DBs
NCBI-GeneID:
117959138
NCBI-ProteinID:
XP_034751994
LinkDB
All DBs
Position
16:complement(22047970..22076878)
Genome browser
AA seq
736 aa
AA seq
DB search
MDETQNGRTSLAKGAKDIAKEAKRQTAKNLSKAVDRASDEYSTRRSYNRFQNEDEEENNY
NAYDQQDGHYADNAGNDEDEASSDATEGHDDEDEIYEGEYQGVPAHSDGKQRDGQVALGQ
PVSDSLKSRKELENERLADEEELAQQYELIMQECGHGRFQWQLFFVLGLALMSDGVEVFV
VGFVLPSAETDMCVPNSGAGWLGSIVYLGMMFGAFFWGGLSDKLGRKQCLLISMSVNGFF
AFLSSFVQGYSMFLVCRMVSGFGIGGAVPIVFSYFAEVLAREKRGEHLSWLCMFWMIGGI
YASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVSAVVALTFMPESPRFFLEIG
KHDEAWMVLKHIHDTNMRARGEPERVFTVNRIKIPKQLDELVEMQNESANPVLKVLLKIK
TELRGIWLTFLKCFNYPVRDNTIKLAVVWFTLSFGYYGLSVWFPDVIKHLQADEYASRVK
LHNSEHIEDFTFNFTLENQIHRNGVFLNDRFISMKFKAVTFIDSSFINCYFEDVSSLGSF
FKNCTFVDSFFYNTDIDDAKLTNSRVINSSFHHNKTGCQMTFDDDYSAYWVYFVNFLGTL
AVLPGNIVSALLMDKIGRLSMLGGSMVLSGISCFFLWFGTSESMMIFMLCLYNGLSISAW
NSLDVVTAELYPTDRRGTGFGFCNAMCKLAAVLGNLIFGSLVGITKAIPILMASAVLVGG
GLVGLRLPDTRANVLM
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaacgcaaaacggcaggacttccttggctaaaggtgccaaggacattgctaaa
gaagccaagaggcaaactgccaaaaatttaagcaaagctgttgatcgtgcatcagatgaa
tactccactcgtcgcagctataaccgcttccagaacgaggacgaagaagaaaacaactac
aatgcttacgatcagcaagacggtcactacgccgacaacgcaggcaacgacgaggacgag
gcctccagtgacgccacggagggccacgacgacgaggacgagatctacgagggagagtac
caaggcgttcctgcccacagcgatgggaagcagcgggacgggcaggtggctctgggccag
ccggtttctgacagcctaaagagccgcaaggagctggaaaacgagagactggccgacgag
gaggagctcgcccagcagtacgagctgatcatgcaagagtgtggccacgggagattccag
tggcagctgttcttcgtactcgggctggcgctcatgtcagacggcgtggaggtgttcgta
gtgggcttcgtcctacccagcgccgagacagacatgtgtgtccccaactctggtgccggg
tggcttggtagcattgtgtatctggggatgatgtttggggccttcttttggggcggcctg
tcagacaagctaggccgtaaacagtgcctgcttatttccatgtctgtcaatggcttcttc
gccttcctctcctcctttgtccaaggctacagcatgttcctcgtctgccgcatggtgtct
ggctttgggattggaggtgcagtaccgattgtattctcgtactttgcggaggtgttggcc
cgggagaagagaggggagcatctgagctggctgtgcatgttctggatgatcggagggatt
tacgcctcagccatggcctgggccatcatcccgcactatggctggagcttcagcatgggt
tcagcctaccagttccacagctggagagtgtttgtggtggtgtgtgcgctgccgtgtgtc
tctgcagtagtggctctcacgtttatgcctgagagcccccgcttcttcctggagataggt
aaacacgacgaggcctggatggtgctcaaacacatccacgacaccaacatgcgtgcccgc
ggagagcccgagagagtcttcactgtgaacaggatcaaaatccccaaacagctggacgag
ctggtggagatgcagaatgagtcagccaaccccgtactcaaggtcctcttgaagatcaag
actgagctcagaggaatctggctgacgtttctgaaatgcttcaactacccagtgagagac
aacactataaagctggcagtggtctggtttaccctgtcgtttgggtactatgggctgtcg
gtgtggttcccggacgtcatcaagcaccttcaggctgacgagtacgcctccagagtcaag
ctccacaacagcgaacacattgaagacttcaccttcaacttcaccctggagaaccagatc
cacagaaacggagtctttctaaatgacaggttcatcagtatgaagtttaaggcggtcaca
ttcatcgactcatctttcatcaactgctattttgaggatgtctcctccttaggatccttc
ttcaaaaactgtaccttcgtagactccttcttttacaacacggatattgacgacgccaaa
ctaacaaattccagagtgatcaacagctccttccaccacaacaagacaggctgtcagatg
acatttgacgatgattacagcgcctactgggtctattttgtcaacttcctgggaacgctg
gctgtgctgcccggaaacatcgtctctgccctcctcatggacaaaataggacgtctcagc
atgttaggaggctccatggtgctgtcaggcatcagctgcttcttcctctggtttggcacc
agcgagtcgatgatgatcttcatgctctgtctctacaacggcctcagtatctctgcctgg
aactcgctggatgtggtcaccgctgagctgtatccaacagacaggaggggcaccggcttt
ggcttctgtaacgccatgtgtaagctggcagcggtgctaggcaacctgatctttggctca
ctggttggcatcaccaaggccatccccatcctgatggcatcggctgtgttggttggcggc
gggctggtggggctccgactgccagacacacgggccaatgtcctcatgtaa
DBGET
integrated database retrieval system
