Etheostoma cragini (Arkansas darter): 117959157
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Entry
117959157 CDS
T07493
Symbol
oclna
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03272
Virion - Hepatitis viruses
ecra04514
Cell adhesion molecules
ecra04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117959157 (oclna)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117959157 (oclna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117959157 (oclna)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecra01009
]
117959157 (oclna)
Protein phosphatases and associated proteins [BR:
ecra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117959157 (oclna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Swi5
Clc-like
DUF2381
Sec8_N
APG6_N
DUF6560
Spectrin_SESTD1
Spc24
SUR7
Cluap1
Motif
Other DBs
NCBI-GeneID:
117959157
NCBI-ProteinID:
XP_034752028
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All DBs
Position
16:23184403..23198358
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AA seq
494 aa
AA seq
DB search
MSSRPNGSPPPYDSETRDYVPPQPAYSYYPDDEFQHFYRWSSPPGILKIMSIICIVLSVG
IFACVASTLAWDVQGAMDGFGGYGYGGYGGTGYGGGGSYGSFGGGAYGAGNSYGYGGIGG
NYYDPRKSKGFIIFMAAATFIASLTIFIIIVSHQSLTDSRRFYLAVIIICAILALLMLIA
SIVYLVAVNPMAQSYGSTFGMQIAGLCAQYQGPQASGLLVNQYLYHYCVLEPQEAIAAVF
GFLVGISLIIMLVFAVKTRQKIQYFGKSNILWKKVKVINEMEPPQDVEAWVNNVSHGPEV
LPMDYSEKMRGSRSHLDDESTNYDKPPYDYTPQPPVEDDLPLQSGGPYSSYSDVPSSAGK
PKKRRTPRSRQDNEADYNSSGDELDDNDFDTEFPPIANEAERTDYKRQFDRDHKEYKDLQ
AELDALNKNLADVDKELDELQEGSPQFLDALDEYNRIKDIKKTPDYQVKKRRCKYLKSKL
SHIKKMVSDYDRKA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccaggcccaatgggagtccacctccctacgactcagagaccagagattacgtc
cccccccagccggcctactcctactacccagatgacgagttccagcatttctaccgctgg
tcgtctccgccaggcatccttaaaatcatgtccatcatctgcatcgtactgagcgttggc
atattcgcgtgcgttgcgtccacgctggcctgggacgtccagggagcgatggacggcttc
gggggctacggctacggaggctacgggggaaccgggtacggcggcggcggctcgtacggc
agttttggcggcggtgcgtacggagctggaaacagctacggctacggtggcatcggcggg
aattactacgaccccagaaagagcaaagggttcatcatcttcatggcggccgccaccttc
atcgccagcctgaccatcttcatcatcatcgtgtctcaccagagcctgacggacagcagg
aggttctacctggcggtgatcatcatctgcgccatcctagcgctgctaatgctaatagcc
tccatagtgtacttggtggcggtgaaccccatggcgcagtcctacggatccacgttcggc
atgcagatcgccgggctgtgtgctcagtaccaagggccccaggcttcagggctcctggtc
aaccagtacctctaccactactgcgtcctggagccacaggaggccatcgcggcggtgttc
ggcttcctggtcggcatctcgctcatcatcatgctcgtcttcgccgtgaagactcgccag
aagatccagtacttcggcaagagcaacattttgtggaagaaggtgaaggtgatcaacgag
atggagccacctcaggacgtggaggcgtgggtgaacaatgtgtcccacggtcctgaagtg
ctgccgatggactactctgagaagatgagaggctccaggagtcacctggacgatgaaagc
accaactacgacaaacccccctacgactacaccccacagcctccagttgaagatgacctg
cccttgcaaagcgggggtccctacagctcttactccgacgtgcccagctcggcgggaaag
cccaaaaagagacgcacgccccggtcgcgtcaggacaacgaggccgactacaactcctcc
ggagacgagctggacgacaacgacttcgacactgagttcccacccatagcgaacgaggcg
gagcgcaccgactacaagcgccagtttgaccgggaccacaaggagtacaaagacctgcag
gcggagctggacgcgctcaacaagaacctggcggacgtggacaaggagctggacgagctg
caggagggcagcccccagttcctggatgctctggatgagtacaacaggattaaagacatt
aaaaagactccagactaccaggtgaagaagcgcaggtgtaaatacctcaaatccaaactg
agccacatcaagaagatggtcagcgactacgaccgcaaggcctga
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