Etheostoma cragini (Arkansas darter): 117959233
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Entry
117959233 CDS
T07493
Symbol
skp2
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04068
FoxO signaling pathway
ecra04110
Cell cycle
ecra04120
Ubiquitin mediated proteolysis
ecra04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117959233 (skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
117959233 (skp2)
04150 mTOR signaling pathway
117959233 (skp2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117959233 (skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117959233 (skp2)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117959233 (skp2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_NXF1-5
LRR_9
LRR_4
Exo70_N
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
117959233
NCBI-ProteinID:
XP_034752126
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Position
16:3925140..3934864
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AA seq
429 aa
AA seq
DB search
MPKHSMPLQDLPCLSLQGSMLSQSKKNNKRKSKGCLSEGLDVECTPTELIQQWSPSHKHQ
RLISKGKENDSSQFVLARRSRRKKESTTSGISWDHLPDELLLRILCYIPLQDLLRMTIVC
KRWHRLAFDESLWHSVDLEGLTHTGSALQQVLKTGVRMLRCPRSFVEELDFTDIGRLQLV
RVDLSSSIIPTSSLERIICQCRLLEYLSLEGLQLSDTIISALSKNPNLLQLNLSGCSSFS
GPALADMLKSLVSIEQLNISWCEFNNNHVKSVVNNLSPTATHLNLSGYRENLLLDDVKVL
VTRCPNIQTLDLSDSTLLMADCFPVLKHLTGLVHLSLSRCYHIHLAALTDLGKTFPMLRL
LDVFGIVNGSYLSSLKKELPLVGINTLPFSSIARPTPATRLADCSMWNTKCRLRVRLLAP
HLHVQPVVR
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacacagcatgccactgcaggatctgccctgcctgagtctccagggctccatg
ttgtctcagtccaagaagaacaacaaacgcaagtccaaaggctgcctcagtgagggcctg
gacgtcgaatgcactccaacagagctcatccagcagtggtcaccaagccacaagcaccag
cggctcatcagcaaggggaaagagaatgacagcagccagtttgttctggccagaagatca
aggaggaaaaaagaatccacgacatcaggcatttcatgggaccaccttcccgatgagctg
cttctcaggatactgtgctatattcctctgcaggacctcctcaggatgacgatagtttgc
aagcgctggcatcgcttagcgtttgatgagtctctgtggcacagcgtggatctggagggg
ttgacccatacgggctcagctctgcagcaggtactgaagaccggagtccgcatgctgcgc
tgccctcgctccttcgtggaagagctggacttcacagacataggccgtctgcagttagtt
cgggtggatctgtccagctccatcatccccacctcgtctctggagaggatcatctgtcag
tgcaggctgctggagtatctgagcctggagggcctgcagctctcagacacaatcatcagc
gctctgtccaagaacccaaaccttctgcagctcaacctaagcggctgctccagcttctct
ggtcccgccctggccgacatgctcaaatccctcgtcagtatcgagcagttgaacatatca
tggtgtgaattcaacaataatcatgtgaagagtgttgttaataatctgagccccactgct
acccacctcaacctcagcggataccgagagaacctcttgctagacgatgtgaaggtgctg
gtgacgaggtgccccaatattcaaacgctagatttaagtgacagcactctactgatggcc
gactgcttccccgtcctcaaacacctgacgggcctggtgcatctctccctgagtcgctgc
taccacattcacctcgccgctctcactgacttgggtaagacgttccctatgctgcgcctg
ctggacgtgttcggcatcgtgaacggcagctacctgtcctctctgaagaaggagctgcct
ctcgtcggcatcaacacgctgccgttctccagcatcgcccggcccacgcccgccaccagg
ctcgccgactgctccatgtggaacaccaagtgtcgcctgagggtcagactgttggcgcca
cacctccacgtccagcccgttgtgcggtga
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