Etheostoma cragini (Arkansas darter): 117959359
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Entry
117959359 CDS
T07493
Name
(RefSeq) rab GTPase-activating protein 1 isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117959359
Membrane trafficking [BR:
ecra04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
117959359
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
Motif
Other DBs
NCBI-GeneID:
117959359
NCBI-ProteinID:
XP_034752336
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All DBs
Position
16:complement(12359136..12431535)
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AA seq
1092 aa
AA seq
DB search
MDDKGSVGKISVSSDSVSTLNSEDFVLVSRLGDETPSSTNNGSDDEKTGLKVISEEGVSF
KIVGNGSEQQLQRELEDVLMESSVVATGLKSETGMDNLGGGDHGPRPTTVSPVPAGSDPL
SSPPLKLEMVLPVQTAQESELNERSYRAADESSSDGSPGSPIQDEDSVVFSQLTYLGCAS
VNAPRSEVEALRMMSILRGQCQLPLDVTLSVPGVSEGTVRLLDPNTSTEIANYPIYKILF
CVRGHDGTPENDCFAFTESHYNAEIFRIHVFRCQIQEAVSRILYSFATAFRRSAKKAVLS
SQQPAPLTPDSDLFTFTVSLEIKEDDGKGTFSAVAKDKDKQSFKLRAGLDKKIVIYVQQT
SNKELAIERCFGLLLSPGKNVKNSDMHLLDLESMGKSSDGKSYIITGSWNPNTPQFQPVN
EETPKDKFMYMTTAVDLVITEVEEPVRFLLETRVRVCSPNDRLFWPFSKRNYTETFYLKL
RQMERKERKSPASDTLYEVVSLESETEREKRKTTASPGILPTGTGTTVPSPPEDDEEEDN
DEPLLSGSGDVSKECAEKILETWGDLLSKWHLNLSVRPRQLPALVRSGIPEALRGEVWQL
LAGCHNNDHQVEEYRTLITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAY
SVYDEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRDLFKQNFEDLHCKFFQL
ERLMQEYIPDLYNHFLNVGLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFN
VALALLKTSKDDLIQTDFEGALKFFRVPVPKRYRSEENAKKLMELACSIKISQKKLKKFE
KEYHTLREQQEQQEAPIERYERENRRLQEANMRLEQENDDLAHELVSSKIALRKDLDNAE
EKADALNKELLLTKQKLVDSEDEKRRLEEESAQLKEMCRRELDKSESEIKKNGSIIGEYK
QICSQLSERLEKQQTANRGELEKIRSKVEGCEKCSSLFNKEGRVRAAVTTAPAGGTEETD
EEKEGLKNQLREMELELAQTKLQLVEAECKIQDLEHHLGLALNEVQAAKKTWFNRTLSSI
KTVTGSQGKETT
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaaggctcagtggggaagattagcgtgtcttcggactcagtgtccactctc
aacagtgaggactttgtccttgtgtcccggctgggggacgagacaccctcctccactaat
aatggtagtgatgacgaaaagacaggactgaaggtgatttctgaggaaggggtcagcttt
aagattgtggggaatggaagtgagcagcagcttcagagggagttagaggatgtcctcatg
gaatcgtcagtagttgccactggcctcaaatcagaaaccggaatggacaaccttggtggt
ggcgaccatggccctcgtcctactacagtgtcacctgtaccagcaggctctgaccctctg
agctcaccaccgctcaagttggagatggtgcttcctgttcagacggctcaggagagtgag
ctgaatgagaggtcgtatcgagcagcagatgaatcatcatcagatggcagtcctggcagt
cccatccaagatgaagacagcgttgtgttcagccagctgacatatcttgggtgtgcctca
gtcaacgccccccgcagtgaggtggaggccctccgtatgatgagtatcctcagagggcag
tgccaactccccctggatgtcacactgtctgtgccaggcgtgtccgaaggcactgtcagg
ttgctggaccccaacaccagtacagagatcgccaactaccctatctacaagattctgttc
tgtgtgcgaggccatgatggcacaccagagaatgactgctttgccttcactgagagccac
tacaatgctgagatcttcaggatccatgtgttccgctgccaaatccaagaagcggtgagt
agaatactgtacagctttgccacagcgtttcggcggtcagctaagaaggcagttctgtca
tctcagcagcctgctccactcacccctgacagtgacttgtttacctttaccgtcagtctg
gaaatcaaagaggatgatggcaagggtaccttcagtgctgtagcaaaagacaaggacaag
cagagcttcaagctacgtgcaggattggataagaaaattgtaatttatgtccagcagaca
tccaataaggaactggcaattgagaggtgttttggtctcctgctcagcccagggaaaaat
gtgaagaacagcgacatgcacctgctagatctggagtcaatgggaaagagttccgacggg
aagtcttacatcatcacaggaagttggaaccccaacacgcctcagttccaacctgtgaat
gaggaaacgcccaaagataaattcatgtacatgacaacagcagtggacctggtgatcaca
gaggtggaggagccagtccgttttctgctggagacaagggtcagagtctgctccccgaat
gacaggctgttctggccattcagcaagcgtaactacactgagaccttctaccttaaacta
cgacagatggagcgtaaggagcgtaagagtcctgcctctgacacactttatgaggtggtg
agtttggaaagtgagactgagagagagaaacggaagaccacagctagtcctggcatcctg
cccaccgggactggtaccactgtcccttcaccacctgaggatgatgaagaggaagataat
gatgagcctttactcagcgggtcaggtgatgtttccaaggagtgtgcagagaagatcctg
gagacctggggggacttgttatccaaatggcatttgaacttatcagtgcgtcccaggcag
ctgccagctttggtacggagtggcatccctgaggctctccgtggggaggtgtggcagctc
ctggcaggctgccataacaatgaccaccaggtagaagagtaccgcactcttattacaaag
gaatcccctcaggacagtgccattaccagggacattaacaggacattcccagctcatgac
tacttcaaagacaccggaggagatggacaagactccctttacaagatctgcaaggcttac
tctgtttacgatgaggagatcggttactgccagggacaatccttcttggctgctgtgcta
ttgctgcatatgccagaggagcaggctttcagtgtgctggtcaaaatcatgtttgattac
gggctcagggaccttttcaagcagaactttgaagatctacattgcaagttcttccaactt
gagagactcatgcaggaatatataccagacctgtacaaccatttcctgaatgtgggtctg
gaggctcatatgtatgcctctcagtggttcctcaccctttttacagccaagttccctctt
tacatggtcttccacattattgacctgctactgtgtgagggaatcagtgtgatcttcaat
gtggccttggcacttctgaagacatcaaaagacgatttgatccaaacagacttcgaaggt
gcactcaaattctttcgcgtccccgttccgaagaggtaccgctctgaagaaaacgcgaag
aaactgatggagctggcctgtagcataaagatcagccagaaaaagctgaagaaatttgag
aaggagtaccacaccttgagggagcagcaggagcaacaggaggccccaatcgagagatat
gagcgggagaaccgtcgtttgcaagaggctaacatgcgtttggaacaggagaatgacgat
ctggcacatgaactagtcagcagcaagatagccctgcgcaaagacctggacaatgctgag
gagaaggcagatgccctgaataaagagttgctgctgaccaaacagaaactggtggactct
gaggatgagaagagacgactggaggaagaatctgcgcagctaaaggagatgtgcagacga
gagcttgataagtctgaatcagagataaagaagaacggctccattattggagaatataag
cagatctgctcccagctgagtgaacgactggagaaacaacagacagccaaccgaggagaa
ctggagaaaatccggtccaaagtggaaggctgtgagaagtgcagtagtcttttcaacaaa
gaaggtcgtgtgcgggccgctgtgaccacagcacctgctggggggactgaggagacagat
gaggagaaagagggtttaaagaaccagctgagagagatggagctggaactagcccagacc
aaactgcagctggtggaggctgagtgcaaaatccaggacttggagcaccaccttggtctg
gccctcaacgaagtgcaggctgccaagaagacctggttcaaccgaacgctcagctctatc
aagaccgtcactgggtcccagggcaaggagaccacctaa
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