Etheostoma cragini (Arkansas darter): 117959372
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Entry
117959372 CDS
T07493
Symbol
nup214
Name
(RefSeq) nuclear pore complex protein Nup214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117959372 (nup214)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117959372 (nup214)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117959372 (nup214)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_NUP159_NUP214
Nup214_FG
Beta-prop_EML_2
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40
Beta-prop_IFT140_1st
WD40_CDC20-Fz
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
117959372
NCBI-ProteinID:
XP_034752360
LinkDB
All DBs
Position
16:16381825..16420198
Genome browser
AA seq
1980 aa
AA seq
DB search
MSDEADSPPEREMKDFQFRQMKKTRVFNPAEDLPKERTSLLTISNKFGLTFVGLHKTFKV
YLTQDILSDKFDGNTNEIVEGTAALAEVNVDLALHHLALSCDELTLSVCGMTEEAGLSIT
FYDVRTFMNKARPQKLPFASLLPAVHPGSLVQDLKWNPVQASMLAVCLSDGRMMILDVTD
IVNIQAELPASSGITCLCWSPKGKQVAAGKMNSTVSQYTPALQEKKVIPCPHFYTSDEPV
KVLDVLWLRTFVFAVVYAAADGSLETPPELVLISLPKKDEKVDIKYLNFSDSVYGSCTER
QHHYFLSHVEDWDLVFAASAASIEVSVIAAREDKIWELWILEDASRAELPVTDTNEDTLP
LGLAIDYTSQQEIYITDEKTLPPAPTMLMLSTEGLLCPFALLNVNPGVKQLVSAPTALPL
VGERQPKPGSLAAQPPKIAASFPSVPATFTNLGLTSAAASILSAPAAVSSAAPFSMVPTA
PVSSASSSFSFSVPTTCSTSALAFSLEVSTPFGSGSSGFSFTSKPPSDTPSAPSAFSFTP
SIKPSAVAAPVPAATPQSIATASQPTVKLNLNQRFSALETPAPSSFSFNSLLPKTVASNS
SSLTVPPLSATKLPAVLTPVRPVQTSTPPAVLQKPAPAAQARIQTPQAAVSVKALEKQLQ
QKKDSDPIMAGILEEIAHFQKELDDLKARSTRADFKVGTNEEMKELRKESEDLHIFTLEI
KETTESLHGDIGALKTTLLEGFAGAEEAKAQSELSRDRNYRQLLYKKPLDPRSEEQLKEI
RRLYQYVMFAVEDVNDVLDVEWEKHLEKKKKQKHMVVPGREGLFTTLANNLYIINQQKNR
LDQFIKQLTSLRLYNKNTTPTINCSSATTTAAGLESELDSLRDALLKARLDPSPPKTKPK
SPVKISPVKQSQLRNFLSKGQMPPVRSTAPANLSRSAFLSPKYYEDLDDVSSTSSLSLEP
HPADLEEEELQPEPLPLTVIPPALSTPRHPTVVRTPSVLPGFGAIQSTPLTKMNSVQGMG
FGLSPIASPVPTNMINLSGAESTALATKTVKHGAPPTERNIPVTIPAQQAAANAAVRRQM
ANQKTAVVSTSLTESTLKTVPQVVNVQELKDKGPPMPVSNITSSSVPDPAAPVFATVFSN
QAKRNPSQGMQKMSAESTTTTPTSFVFGQSSKPDVSVAPASSAEQNTSKGFSFASGSAGF
SFASVTQGAGISQVKDVNKFSFGGNGKMMFGQTVEEPFSLTPKSTSPALVTGSPTLPPYP
SDDKPASATTASRIEPPPLKTIGGETLGCFSGLRVGHGEEAKDSSTKPAAGSFSSGEIGL
GMGKGAQFSFVASPQKSADDSTGADLSKGAVSGSLFKPPEPNPKPAFSVTQSSSTASASP
TSFGSLLAASLDASEEPKVSPKPSEPTPPPDKEPSTGQVVESTLVVAEPTVDAAVTETTA
ATVTAPTPPLPLATTAPTPVPPSSITKPTEALPPNTASAAATVDATPDSTTTTAPLPAYT
AAVAPVSQLAPPAFQVPISEKPGSIFTQPVPTITDSSSLGLTPVISTVAAAPTSTNPVVV
NSTTTDAITVFGQPAAPPAPPASTAPTAPASTGFGSTAFGTSTGTVFGKSVFGQVSGFGQ
PASNTKTPGGFSFGQSAFGASSNSATTGGGLFGAATATNASSFSFGTSSANTASSTGSGL
FGQTTTPAFGQSSGFGQAPVFGSNTTTSSSTGFSFAQPSAFGCSSATPVFGQQASSGSVF
GQQPSSGGTLFGSNSANTAGSAAGGGFFSGLGGKPSEDAANKNPFGTSVSTGGFGQPAQT
GANTLFGNSGAKTFGFGQSSFGEQKPSGTFSTGAGSVASQGFGSFSSPAKSGGFGSAPVF
GSPPSFGSTQAFGSAAAFGSSPSFPNNMVPSAGKVFGEGTAAANMGGFGFASPPSGPSFG
ALANQSAPSFGGLAQQGSGFGSQPSSFSGFGQQPQAGGFSGNTFGSANQSSPQTFASWRS
NT seq
5943 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgaagcagattcccctcctgagagggaaatgaaggactttcagtttcgtcag
atgaagaaaacaagagtctttaaccctgctgaagatttgcccaaagaaagaactagtctg
cttaccatctcaaacaaatttggtttaacttttgtaggactccataaaacattcaaagtt
tacctaactcaagacattctgtctgataaatttgacggtaacaccaacgaaatagttgag
gggacagcagcattagcggaggttaatgtggatctggctctgcaccacttggctctcagt
tgtgatgaacttactttatcagtatgtggcatgactgaggaggcgggtttgtccatcaca
ttctatgatgtccgcaccttcatgaacaaggcaagaccacagaagctaccttttgcatca
ctgctgccagcagtacaccctggcagtttagtgcaagacctgaagtggaatcctgtacag
gcatccatgttggctgtctgtttgtctgacggccgtatgatgattttggatgttactgac
attgtcaacattcaggccgagctacctgcttcaagtggcatcacatgtctttgctggagt
ccaaaaggaaaacaagttgctgctggaaaaatgaattccacagtcagtcagtatacacca
gcactacaagaaaagaaagttatcccatgtccacacttctacacctctgatgaacctgtc
aaagttctggatgtgctgtggctgagaacctttgtgtttgcagtagtatatgctgctgca
gatggctcccttgagacccctcctgagctagtgttgatctcccttcctaagaaggatgag
aaggtggacataaagtatttgaactttagtgactcggtgtacggaagctgtactgagcga
caacaccactactttcttagccatgtagaggactgggatcttgtgtttgcggcatcagca
gcttccattgaagtcagcgtcatagccgccagagaggacaagatctgggagctttggatc
ctggaagatgcaagtagggctgagcttccagtgactgacacaaatgaagatactctgccc
cttggtttagccatagactacaccagccagcaggagatctacatcactgatgagaagacc
ttgcccccagcgcccacaatgctgatgctctccacagagggattactctgcccatttgct
ctgctcaacgttaatcctggggttaagcaactggtctcagctcccactgcccttcccttg
gttggggaaagacaacccaagccaggttctttggcagcccaaccacccaaaatagctgcc
tccttcccatctgtcccagcaacattcacaaatcttggtcttacttcagcggctgcttct
attctttcagcccctgctgcagtttcctccgctgccccattcagcatggttcccacagcc
cctgtttcgtcggcatcatcaagcttcagtttctcagtgccaactacatgctccacctct
gctctagctttctccctggaggtatctacaccttttggctcagggtcctcaggcttctcc
tttacctccaagcctccctctgacactccctcagcaccttcagcgttttctttcacccct
tccatcaaaccatcagcagtggcagcaccagttcccgctgcaacaccccagagcattgct
actgcctctcaaccaaccgtgaaacttaatctaaatcagaggttttcagcactggagact
ccagcaccatcatctttctcctttaattccttgctgcccaaaacagttgcctccaattcc
agtagtttgaccgtccctccactctcagccactaagctgccagctgtgttgactccagtg
cgtccagttcagaccagcacaccacccgcagttctccagaaacctgctcctgctgcccag
gcccgtatccaaactccacaggcagctgttagtgtgaaggccctggagaaacagctacag
caaaagaaagactctgatcccattatggctggtatattagaagagattgcacacttccag
aaggagttagatgatcttaaagcacgaagcacaagagctgacttcaaggttggcacaaat
gaggagatgaaggagttgaggaaggagtcagaggacctccacattttcaccttggagatc
aaggaaacaacagagtctctccatggggacattggtgcactgaagaccaccttacttgag
ggctttgctggggcagaagaagccaaggctcagagtgagctgagcagagatagaaattac
agacagctgctgtacaaaaaacctctggacccccgcagcgaggaacagctcaaggagatt
cgcaggctttaccagtatgtaatgtttgctgtggaagatgtaaatgacgtactggatgtg
gaatgggagaaacaccttgagaagaagaagaagcagaaacacatggttgtgccagggcgt
gagggactatttactacactggccaacaacctgtacattatcaaccagcagaagaacaga
ttggaccagtttatcaagcaactaacttcactgcgcctctacaacaagaataccactcca
actataaactgcagctctgctacaacaacagctgctggcttggaaagcgagcttgatagt
ttaagggatgcactcctgaaagccagactggacccctcccctcctaagaccaaacccaaa
tctccagtcaagatatcgccagtgaaacagtcccagctgcgtaactttctctcaaagggg
cagatgcctcctgtccgctcaactgcaccagccaacctgtctcgctctgccttcctttca
cctaaatactacgaggacttggatgacgtaagctctacgtcctccctgtccctggagcct
cacccagctgacttggaggaggaggaactgcagccagaaccccttccccttactgtcatt
cctccagcattgtccaccccccgccaccccacagtcgtgagaaccccctctgtcctgcca
ggctttggggctatccagtccacccctttaacaaaaatgaactcagtacagggcatgggg
tttggactcagccccattgccagccctgttccaaccaatatgatcaacctcagcggggct
gaaagcactgctcttgccacaaagacagtaaaacatggagccccaccaactgagaggaac
atccctgtcaccatcccggcccaacaagctgcagccaatgccgctgtacgtaggcagatg
gccaatcagaagaccgctgttgtcagtacttccttgacagagtccactttgaagactgtt
cctcaggtggtcaatgtccaggagctcaaggacaaagggcctccaatgccggtttccaat
atcaccagctcatcggtaccagatccagcagctccggtctttgcaacagttttttccaac
caggccaaacgaaaccctagccaaggtatgcagaagatgtctgctgaaagtacaacaact
acaccgacaagctttgtgtttggtcaatcttccaaaccagatgtttccgtggctccagct
agctcagcagagcaaaacaccagcaaaggtttctcctttgcatcagggtctgctggcttc
agttttgcttctgttacacagggagctggaatctcacaagtgaaggatgtgaataaattt
tcctttggtggaaatggcaagatgatgtttggccagactgtagaggagccattctccctc
accccaaagtccacctcccctgctcttgtcactgggtcacccaccctgcctccataccct
tcagatgacaaacctgcctctgccacaactgcctccaggatagagcctccaccccttaag
acaattggaggagaaactctgggctgtttctctggactacgtgtgggccacggagaagaa
gcaaaagattcatccacaaaaccagctgctggctcatttagctctggagaaattggactt
ggtatgggcaagggagcacagtttagctttgttgcaagtccccaaaagtctgcagatgat
tctacaggagcagacttgtccaagggggcagtgtcaggcagtttgttcaaacctcctgaa
ccaaaccccaagccggccttctctgttacccagtctagttcaactgcctcggcttcacct
acgtcttttggtagtcttcttgcagcttctttagatgcctcagaggagccaaaggtttcc
ccaaagccttcggaacccacaccaccccctgataaagaacctagtactggacaagttgta
gaaagcacccttgtagtggctgagcccacagtggatgcagccgtcacagaaacaacagca
gccacagttacagcaccaacaccccctcttcctttggccacaacggcccctaccccagtc
cctccctcctccatcaccaaaccaactgaagcactccctccaaatacagccagtgcagct
gccacagtagatgccaccccagacagcaccaccaccactgctcctctgcctgcttacact
gctgctgtagctcctgtctcccagttagctccaccagcgttccaggtgcccatttctgaa
aaaccaggttccatttttactcaacccgtccctacaataacagacagcagttcccttgga
cttacacccgttatcagcacagttgctgctgcacccacctctactaaccctgttgttgtt
aacagtactacaactgatgctattactgtgtttgggcaacctgctgcacctcctgcacct
cctgcttccactgctcctacagccccagcatccacaggatttggctcaacagcgtttggt
acatcaactggaactgtttttggcaaatctgtgtttggccaagtgagtggctttggccag
cctgccagcaacactaaaacacctgggggcttttcgtttggccaatcagcatttggagca
agttctaacagtgcgactactggaggaggactttttggtgctgctactgctaccaatgcc
agttccttctcttttggcacaagcagtgccaacacagccagcagcactggctcagggctg
tttggacaaactacaacaccagcatttggccagagctctggatttggccaagcgcctgtg
tttgggagtaacaccaccacatcctcatctacagggttcagctttgcacaaccctcagct
tttggctgctcttctgccacccctgtgtttggccaacaagctagcagcgggagtgtattt
ggacagcagccatcatctggtgggactctgtttggctcaaattcagccaatacagccggc
tcagctgctggtggagggttcttctctggccttggaggcaaaccaagcgaagatgctgcc
aacaagaacccatttggcaccagtgtctccactggagggtttgggcagcctgctcagaca
ggtgccaacactctgtttgggaatagcggagccaagacctttggttttggacagtcgtcc
tttggtgagcagaaacctagtgggactttcagcactggtgcggggagtgttgcatcccag
ggatttggttccttctcttctccagcaaaatcaggtggttttggcagtgctccagtgttt
gggagccccccttcctttggtagtacccaggcatttggttctgcagcagcatttggctca
agcccttccttccccaacaacatggttccctcggctggtaaagtctttggcgagggaaca
gcagctgccaacatgggaggatttggatttgcttcacctcccagcggcccatcctttggt
gctctagccaatcagagtgcgccatcatttgggggcctggcccagcagggctctgggttt
ggaagtcagcccagcagcttctcgggctttggacaacagccacaagcaggaggtttctct
ggaaacacctttggctctgcaaaccaatcaagtccacaaacatttgccagttggagaagc
tag
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