Etheostoma cragini (Arkansas darter): 117959389
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Entry
117959389 CDS
T07493
Symbol
nefma
Name
(RefSeq) neurofilament, medium polypeptide a isoform X1
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecra04812
]
117959389 (nefma)
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
117959389 (nefma)
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Tup_N
DUF1664
Motif
Other DBs
NCBI-GeneID:
117959389
NCBI-ProteinID:
XP_034752389
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Position
16:10457713..10463120
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AA seq
874 aa
AA seq
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MSYPVETVGSPFRRTMDTRTTGYGYSRSAGTPSSGFRSQSWSRASPGSTMTTSYKRSVNM
PVSRAYGSTVLSSADSVDYSQTSILNGDYKRSSEKEQLQGLNDRFAVYIDKVHYLEQQNT
QIESEIQSLRQKQVSRSQLGDVYDQELQELRSMLEQIHHDKAQIQLDTDHIDEDIQRLRD
RLDEEARIREETEAIIRVLRKETGDSKLVKSELDKKVQSLQDEIAYIRNNHEEEVSELIA
QIQESQVTIKRQDLQKTDITEALREIRSELEGHSNQNLHQVENWFMCRYAKLTEAAEQNK
DAIKSARDEISDYRRQLQSKTVELESVRGTRDSLERQLNDIEDRHNSDLSSLQETIHQMD
NELKSTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETHFSTFPYRQAVTPTRIS
KSEPPKFKVQHKFVEEIIEETRVEDEKSEMDQALADIAQELSATLGGGGDEEEEDQGEEG
GEGEEAEEEGEEGEEEEVVAATEAKVSSSAPAKEEEEAEEDVKGGDEEEEGEGEGGEEGE
KEEEGKGVDKEKGDDAEEGEGGEEGDEEVEETVLCSKAPESKATPDKEKAVDKEGEEEAG
GEEEGGDQDEDAGSEIASKNGDEKEESEHADKGKKDEREKDEKKVKDEKTDDKSEEAVAK
TEAPKTEAAKPEAAKPEAKNEEAAKTEASKPDSPKPDSLEPESPKPASPKSESPKVGSPK
SESPKPESPKSESPRAESPKTETSKPEAPKAAEEKSEKKSDSTEKKVEKKDVAMNGDLDK
SSPEEKEKKDEEKEGVVITNGVDESPSKDDGSQKVVITKTVETITTGEDGSKHVTKSVTV
TETMKEEVEEVMQVSTKKTEKHSTESIKQVTEAE
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgagttacccggtggaaacggtagggagccccttcaggagaactatggatactaggacg
accggctacggctatagccgctccgctggcaccccctccagcggctttcgctcccagtct
tggtcccgggcaagccccggctccaccatgacaacgtcctacaagaggagcgtgaatatg
ccggtgtcccgagcttacggctcaacggtgctcagctccgccgacagtgttgattatagc
caaacctctatcctgaacggagactacaagcgatctagcgagaaagagcaacttcaaggg
ctcaacgaccgttttgctgtttacattgacaaggtgcactacctggagcagcagaacacg
cagatcgagtcggagatccagtcactgcggcagaagcaggtgtcgcgctcccagctgggc
gacgtctacgaccaggagctgcaggagcttcgctccatgctggagcagatccaccacgac
aaggcgcaaatccagctcgacaccgaccatatcgacgaggacatccagcggctgagggac
cgcttggacgaagaggctcgcattcgggaggagacagaggccatcatccgcgtcctgagg
aaggaaaccggggactcgaagttggtaaagtctgagttggataagaaagttcagtcgctg
caggatgagatcgcttatattcgcaacaaccacgaggaagaagtgagcgagctcatcgcc
cagatccaggagtctcaggtgaccattaagaggcaagacctccagaagacggacatcacc
gaggctctccgggagatccgctccgagctggagggacactcgaaccagaacctgcaccag
gtggagaactggttcatgtgccgctacgccaagctcactgaagctgcggagcagaacaag
gacgccataaagtccgcccgggatgagatatccgactaccgccgccagctgcagtccaag
acggtggagctagagtccgtccgcgggacaagagactcgctggagaggcagctgaatgac
atcgaggaccgccacaacagcgatctgtccagcctgcaggagacaattcaccagatggat
aatgagctcaagagcaccaaatgggagatggctcgtcacctgcgcgagtaccaggacctg
ctcaatgtcaagatggccttggacattgagattgctgcctacaggaaactcctggagggt
gaggagacccacttcagcactttcccctatcgccaggctgtcacccccaccagaatctct
aaatctgagcctcccaagtttaaggtgcagcacaagtttgtggaggaaatcatcgaggag
acgagggtggaagacgaaaaatctgaaatggaccaggccctggcagatatagcacaagag
ctgtctgccacactaggagggggaggagatgaggaagaggaggaccagggggaagaggga
ggagagggagaggaagcagaggaagagggagaagagggtgaggaagaggaagttgtagcc
gcaactgaagccaaagttagctccagtgcacccgctaaagaggaagaggaggctgaggaa
gatgtaaaaggtggcgatgaggaagaagagggggagggagaaggcggtgaagaaggagag
aaggaagaagaaggtaagggagtggataaggaaaagggggatgatgcagaggaaggtgag
ggaggagaagagggagatgaggaagttgaggagacagtattgtgctccaaagcaccagag
tctaaagccacccctgacaaagagaaggccgtcgacaaagaaggagaagaggaagctggt
ggcgaagaggagggcggcgatcaggatgaagatgcaggcagtgagatagcatccaaaaac
ggagatgagaaagaggaaagtgagcatgctgacaaaggcaaaaaggatgagagggaaaaa
gacgagaagaaggtaaaagatgagaaaacggatgacaaatcagaagaagctgtagccaag
acagaagctccgaaaacagaggctgcaaagcccgaggctgcaaagcccgaggcaaagaac
gaggaagccgccaaaactgaggcatcaaaacctgattctccaaagcctgactctctagaa
cctgaatctcccaagcccgcatctccgaagtccgagtcccccaaagtaggctcaccgaag
tcggaatccccaaaacctgagtcccctaagtcagaatccccaagagctgaatccccaaag
acagagacctccaagcccgaggcccctaaagctgctgaagagaaatcagagaaaaagagc
gactcaacagaaaaaaaggttgaaaagaaggatgttgccatgaatggcgatttagacaag
agcagcccagaagagaaagagaagaaggacgaggagaaagaaggcgtcgtgatcactaac
ggcgtggacgagagcccgtccaaggacgatggcagccagaaagtggtgatcaccaaaacc
gtggagacaatcacaaccggagaggacggatccaagcatgtgaccaaatctgtcactgtg
accgagacgatgaaggaggaggtggaggaggtgatgcaggtctccaccaagaaaaccgag
aagcactccaccgagtccatcaagcaggtgaccgaggccgaatga
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