Etheostoma cragini (Arkansas darter): 117959392
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Entry
117959392 CDS
T07493
Name
(RefSeq) ubiquitin
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03010
Ribosome
ecra04120
Ubiquitin mediated proteolysis
ecra04137
Mitophagy - animal
ecra04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
117959392
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117959392
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117959392
04137 Mitophagy - animal
117959392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ecra03011
]
117959392
04121 Ubiquitin system [BR:
ecra04121
]
117959392
Ribosome [BR:
ecra03011
]
Ribosomal proteins
Eukaryotes
Large subunit
117959392
Archaea
117959392
Ubiquitin system [BR:
ecra04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
117959392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
Ubiquitin_5
TBK1_ULD
OTU1_UBXL
Plexin_RBD
UBL_UBAC1
Dsc3_N
HATPase_c
Motif
Other DBs
NCBI-GeneID:
117959392
NCBI-ProteinID:
XP_034752394
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Position
16:complement(23835914..23837958)
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AA seq
77 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGN
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaaccctgaccggcaagaccatcaccctggaggtggagcccagt
gacaccattgagaatgtcaaggcaaagatccaggataaggaggggattcctccagaccag
cagcgtctgatctttgctggcaagcaactggaggacggccgcaccctctctgactacaac
atccagaaggagtccaccctccacctggtcctgcgtctccgtggaggaaactga
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