Etheostoma cragini (Arkansas darter): 117959399
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Entry
117959399 CDS
T07493
Symbol
rnf165a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF165 isoform X1
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117959399 (rnf165a)
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117959399 (rnf165a)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117959399 (rnf165a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
U-box_ZFPL1
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
117959399
NCBI-ProteinID:
XP_034752411
LinkDB
All DBs
Position
16:18252334..18262979
Genome browser
AA seq
398 aa
AA seq
DB search
MVLHRGLMSSICCVCVCVCERGRACFCNYMRQYVLVTGLSGSLCGVCLNESDPSRPFWLS
SDYLHLHCIPIGAHFTRHQHSHATSCRHFHLGAPQVPISAEFPLGHASQPPQTGLATHLS
PAHHPPLTALPAPPQFQEVPGPPFLPQALHQQYLIQQQLLEAQHRRILPQSRRTQERVPL
NPHRLRSGYEYSPALHVPQPMTQQQQQRYLAEGTDWDLSVDAGLPHHQYQLQQLPQHYQH
YLASPRMHHFPRNTSSAQVVVHEIRNYPYPQLHLLALQSLNPSRHATAVRESYEELLQLE
DRLGSVSRGAIQTTIERFTFPHKYKKRKPLQLKIGEEEETDVDEKCTICLSMLEDGEDVR
RLPCMHLFHQGCVDQWLATSRKCPICRVDIETQLNPDS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggtgctccacaggggtcttatgtcctccatctgctgtgtgtgtgtgtgtgtgtgtgag
agaggaagggcttgtttttgcaattacatgcgtcaatatgtacttgtcactggtttgtct
gggtctctctgtggtgtctgtctgaatgaaagtgatcccagcaggcctttctggctcagt
tctgactacttgcatttacattgcattcccataggagcacacttcaccaggcatcaacac
agccatgctacctcctgccgacactttcacctgggtgctccccaggtgcccatctcagcg
gagttccctctaggacacgccagccagccacctcagacaggcctggccacccacttgtcc
ccagcacaccacccacccctcactgccctgcctgcaccccctcagttccaggaggtgcca
gggcctccattcctacctcaggccttacaccagcaatacctcatccagcagcagcttctt
gaagcgcagcaccgcaggattctcccacagtcaagaagaacccaggagcgtgtccccctg
aaccctcaccgactgcgatcaggctatgagtactcccctgccctccatgttccccagcca
atgacacagcagcagcagcagcggtacctggccgaaggcacagactgggatctcagtgtt
gatgccggcctccctcaccaccagtaccagctccaacagcttccgcagcactatcagcat
tacctggcctcccctcgaatgcaccacttccccaggaacacgtcctctgcccaagtggtt
gtacatgaaatcagaaactacccctacccccagctacacctgttggcactgcaaagtctg
aatccttcgaggcacgccaccgctgtgcgagaaagttatgaggagctgttgcagttggag
gaccggctggggagtgtcagcagaggagctattcagacaaccatagagagattcaccttt
ccacacaaatacaagaagagaaagcccctgcagctgaagattggggaggaggaggaaaca
gatgtggatgaaaagtgtaccatctgtttgtccatgcttgaggacggagaggacgtcagg
agattgccctgcatgcacctcttccaccagggctgtgtagaccaatggctggccaccagc
aggaagtgtccgatctgtcgagttgacatcgaaacacagctgaaccctgacagctga
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