Etheostoma cragini (Arkansas darter): 117959443
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Entry
117959443 CDS
T07493
Symbol
sptlc1
Name
(RefSeq) serine palmitoyltransferase 1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00600
Sphingolipid metabolism
ecra01100
Metabolic pathways
Module
ecra_M00094
Ceramide biosynthesis
ecra_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117959443 (sptlc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecra01007
]
117959443 (sptlc1)
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
117959443 (sptlc1)
Amino acid related enzymes [BR:
ecra01007
]
Aminotransferase (transaminase)
Class II
117959443 (sptlc1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
PAD
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
117959443
NCBI-ProteinID:
XP_034752491
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All DBs
Position
16:581817..598485
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AA seq
472 aa
AA seq
DB search
MASGQQWVLVEMVQAFYEAPAYHLILEGILILWIIRLLFSKTYKLHETYRLTEKEKEDLI
EEWQPEPLVPPVSKDHPSLNYDVVTGPPSHKIIINGKECINFASFNFLGLLDNERVKQKA
LASLKKYGVGTCGPRGFYGTFDVHLELESRLANFMNTEEAIIYSYGFATIASAIPAYSKR
GDIIFVDEAACFSIQKGLQASRSFIKYFKHNDMEDLERLLKDQELEDHKNPRKARVTRKF
IVVEGLYINTADICPLPELLKLKYKYKVRIFLEESMSFGVLGEHGRGVTEHFGVNVDDID
LISANMENAVASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPMLAAAAIEALNIMEEDPD
IFTVLREKCKQVYTALQGTPGLKVVGVQFAPALHLQLERSSGSRDSDMQLLRTVVEHCME
RGVALTLARYLEKEERFLPSPSIRVVVTVEQTDEDIQKAVACIREAAAATLK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggacagcaatgggtgttggtggaaatggtacaagcgttttatgaggctcct
gcctatcacctgatcctggagggcatcctcatcctgtggatcatcagacttctgttctcc
aagacctacaagctgcatgagacctacagactgaccgagaaggaaaaggaggacctgatt
gaggagtggcagccggagcctctcgttcctcccgtatccaaagaccatccctccctcaat
tatgatgttgtcacaggacctcccagccacaaaatcataatcaatgggaaagagtgcatt
aactttgcatcatttaacttcctgggcctcctcgacaacgagcgggttaagcaaaaagct
ttggcatcgctgaagaaatatggcgtgggcacgtgtggtccaaggggcttctatggaacc
tttgatgttcacctggagctggagagtcgtctggccaacttcatgaacacggaggaggcc
atcatctattcctacggcttcgcaaccatcgccagtgccatcccggcctactccaagagg
ggcgacatcatctttgtggacgaagccgcctgcttctccatccagaagggtctccaggcg
tcccgcagcttcatcaaatacttcaaacacaacgacatggaggatctggagaggctgctc
aaggaccaggagctggaggaccacaagaatcctcgcaaagctcgagtgacccggaagttc
attgtagtggagggactgtacatcaacactgcagacatctgtcccctcccagaactgctg
aagctcaagtacaagtacaaggtgcggatcttcctggaggaaagcatgtcttttggtgtg
ttgggagaacacggccgaggagtcacagaacacttcggggtcaatgtagacgacattgac
ctgatcagtgccaacatggagaacgccgtggcgtccatcggaggcttctgctgcggacgc
tccttcgtcatagaccaccagcgtctgtcgggccagggctactgcttctctgcctcgctg
ccccccatgctggctgctgctgccatcgaggccctcaacatcatggaggaggatccagat
atattcacggtcctgagagaaaagtgcaaacaggtttacacagcgttacaggggactcca
ggtctgaaggtagtaggagtgcagtttgcaccggcgcttcacttacagctggagagaagt
tccggctcccgagactctgacatgcagctgctccgcaccgttgtagaacattgcatggag
agaggagtggctctgaccctggctcggtacctggagaaagaggagcgtttccttccctcc
cccagtatcagggtggtggtcaccgtcgagcagacggacgaggacatccagaaggccgtg
gcctgtatccgggaggcagcggcagccaccctcaaatga
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