Etheostoma cragini (Arkansas darter): 117959470
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Entry
117959470 CDS
T07493
Symbol
igsf9a
Name
(RefSeq) protein turtle homolog A
KO
K22655
immunoglobulin superfamily member 9
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117959470 (igsf9a)
Cell adhesion molecules [BR:
ecra04515
]
Immunoglobulin superfamily
Other
117959470 (igsf9a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
fn3
Ig_4
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
C2-set_2
V-set_CD47
Ig_5
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
117959470
NCBI-ProteinID:
XP_034752526
LinkDB
All DBs
Position
16:6815226..6875208
Genome browser
AA seq
1614 aa
AA seq
DB search
MGPAGSYLQTFTVVTLFCLFLTIEGARPEVLGKVGGVVELECSFPPSEPAVVSSASLHVV
EWVRQGLDIPVLIKFGSYSPRLHPQYEGRVSLVRITDLRLDDLQLDDQGMYECRILLLDE
PTDELQNGTWTQLSVTAPPTFTQAPPPVMEALVGSHLSLSCVANGNPTPTITWLKDGSVI
QRINYPEGALFLRAVSMQSAGQYTCHASNSEGNVTRVTKVKIKGPPVIVVPPESTSLNKS
QSALLRCQAVADPPNMTYVWQKGGENVHHIESLKSRVKIMVDGTLLISSLIPEDSGNYTC
MPSNGLLTPPTASANLTVMHPAQALPMPQKTYLPTGMEGVVSCPAAAQPPLLRVDWTKDG
EPLDLSLYPGWTVTPEGSLLMTTVNDDAAGIYTCTPYNGYGTMGSSEPTDVILQDPPSLG
IAPETQYKQEAGRTLLIPCQGNKDPTVKVTWSKVDLARRTSYSIEANGSLLLQPLTKDHQ
GAWECSATNRVASVKASTQVFVLGTSPHAATSLSVSPGVKQANISWEPGFDGGSAQTFSV
WVKKISASDNEGKHDWFSVPVPPSSGSGLQVTGLSPATDYHFSILSQNKMGTGPFSEIAT
SRTLDPPPRRSKLKPPVLLSANQGSAGVVLQWSLPEAQQPAITGFVLQSRTEQGEWFQLD
EDISANSSQIVVPGLHKDCVYELRLLSRSGELLSEPSPSVNVSTMGMEIYPATSRLLERV
PEPLLAGVLGGVGFMCLALVLLLGSACVISHKRDQRRRKKDEPPSAIYKCYPSMKTSGSG
SPDSVLKRSLLPASLLYPTSSSFTTTTTSSSSQTDCSSFSADSHHRQKQLQSNYSRGRLT
RTTSTPISPPIELISRGPDGRFALLPYSDDALSVHSKRSGRYPQARVRRSVSLHSEREDR
KPAFVLSVDLPPCRPAQGNPTNRICGVAQSLPHPRPYIFDKKASYDGSPPPPHVSSLGSN
SSLATISQQDSEIPPKFPVLPHIRSGLGQPSVTASALVLQMEHERERGNLSRCLKLAQER
EEMEMELRKYTLERGSARETETEHFDFERREAGANEPGWEYKSSTLPHRYTKGGNECFGR
SQSPFSSSDVHRDFRSLVHPLTLTPGRTCFRASSPASAPCFKPGNHYTAPSPTKHTHLLS
EEAGRLTLPHLSSKQQRHETVEAVPEGYDNSPQSTVLEMQTNDSCSEAWRQNNLSHSSLS
TLSFHSSKHPERSNLHLDAMPDSLEAEVAFPESADEVVCVEMSVDEPELEVCVTQPVKPM
LQHRIASHVQHGHSLGRRGRHEDATRSTSLNRRSPAYPQTPGPESWRAGTHSFKLCDSKQ
RSQSLDSRRRKERGFLAPDAWIDSLSQENCSVASSCRPHTMFWEPQSSPVRSISISSANS
PSAAKAASRSSPAVDALSLKSSPYRPIPKADVPHHYEPKREASIVPRVAKWPVDYREAVK
EAEVYLEAMKEASTCLPHGKDDYREALELEAGGSEGVPEFGSSYSSYASSGRGSMEPANG
RLSLCHLSPTLTTSPGTVEGSQGSTEDTHQMEQSQRRKVSVDENYEWDAADFSSQLGNHD
DLLPSLNLLKPTQCRSLARMQRSTKAQTHCAQPSLLLGHQSSCSAEPEAESVLF
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atggggccagcaggatcatatttgcagactttcactgtggtcacgcttttttgcctattt
ttgactattgaaggtgctaggccagaggtgcttggaaaggtcggaggtgtggtggaattg
gagtgtagttttcctccgtcggagccagctgtcgtgtcttcagcctccctgcatgtggtg
gaatgggttcgacaggggctcgacatccctgtcctgatcaaatttggatcgtactctcct
cgcctccatccacaatatgaggggcgggtgtctctggtacgaatcactgacctgaggctg
gacgacctgcagctggatgaccagggcatgtacgagtgtcgaatcctcttactggatgaa
cccacggatgagctgcaaaatggcacttggactcagctttctgtaactgccccacccact
ttcacacaagccccgcctcctgtgatggaggctctggttggaagtcacctctcgctttcc
tgtgttgctaatggcaaccctactccaaccatcacctggctaaaagatggcagtgtaatt
caaagaataaattatccggaaggagccttgtttctgcgagcagtgagcatgcagtcagca
ggacagtacacctgccacgcttccaattctgagggaaacgtgactcgcgtaaccaaagtg
aagatcaaaggtccgcctgttattgtcgtccctcccgaaagcacgtctctcaacaagtcc
cagagtgcactgctccggtgccaggcggtggctgacccccccaacatgacctacgtttgg
cagaaaggtggagagaacgtccatcacatagagtctctgaagtcgcgagtgaagatcatg
gtagatggaactctactcatctccagtctaatccctgaggattctgggaactacacctgc
atgccgagcaacggcctgctgaccccgcccaccgcctctgccaacctcacagtgatgcac
ccagcccaggctcttccaatgccccagaaaacgtaccttcccacaggtatggagggtgtg
gtctcctgcccggccgcagctcagcctccactgctccgtgtggattggacaaaagatgga
gaaccacttgacctgtccttgtatccaggatggacggtgacgccagagggctctttgttg
atgaccacagtcaatgacgacgcggcagggatttatacgtgtacgccatacaacggctac
ggcaccatgggttcatcggagccgacggacgtaattctacaggaccccccatcactcggc
atcgctccggagacgcagtacaaacaggaagctgggaggaccttgctcatcccctgtcaa
ggaaacaaggaccccacagttaaagtgacctggagcaaggttgacttggctcgtcgtacg
tcttactccatagaagccaacggttctctgctcctgcagcctctcactaaggaccaccag
ggggcgtgggagtgcagtgctactaaccgcgtggcctcggtgaaagccagcacacaagtc
ttcgtcctgggaaccagtccccatgcggcaacctctctgtccgtctctccaggggtgaag
caggccaacatttcctgggagccaggctttgatggaggatcagcacagacattttcagtt
tgggtgaagaagatttcagcgagtgataatgaagggaagcacgactggttctctgtgccc
gtgcccccgtcctcgggcagcgggctgcaggtgaccggcctgtctcctgccaccgactac
cacttcagcatcctgtctcaaaataaaatgggcacaggacccttcagtgagatcgccacc
tcgaggaccttggatcctccgccgaggagaagtaagctgaagccccctgtgttgctgtca
gctaatcagggctcagcaggtgtcgttctgcaatggtcccttcctgaagctcagcagcct
gccatcacaggctttgttctccaatcccgcaccgagcaaggagagtggtttcaactggac
gaggacatcagtgccaacagtagccagatagttgttcccggtctgcacaaggactgtgtg
tacgagctgcggctgctatctcgtagtggggagttgctgagcgagcccagtccatcagtc
aatgtctccaccatggggatggagatctaccccgccacatcccgactgctggagcgggtc
ccggagccgttactggccggcgtgctgggcggggtcggcttcatgtgcttggcactggtc
ttgctgctggggtccgcctgtgtcatcagccacaagagggatcagcgtcgcagaaagaag
gatgagcccccctctgccatctataaatgctacccatcaatgaagacttcaggcagtggc
agtccagacagtgtgttgaagagaagcctccttccagccagcctcctctatcccacctct
tcctccttcaccaccaccaccacctcctcctcctcgcagacagactgctcctcctttagc
gctgacagtcatcatcggcagaagcaactccagtccaactacagcagaggccgccttact
aggacaacttctactccgatttcccctccaatcgagctgatctctagaggcccggatggg
cgttttgcactcctaccctacagcgacgacgcgctgagtgttcacagcaagagaagtgga
cggtatccccaagctagggtgcgaaggtctgtgtctctgcattcagagagggaagacagg
aagccagcattcgtgctttctgttgatctcccaccttgccggccggcacagggtaatcct
acaaaccgaatttgtggcgtggcccagagcctgccacatccccgcccttatatctttgat
aagaaggcaagctacgatggctctcctcctcctcctcacgtcagcagcctgggctcgaac
agtagtttggccaccatttctcaacaagacagcgaaatacctcccaaatttccagtgctc
ccgcatatccgatccggcctaggccagccgtctgtgaccgccagcgctctggttctccaa
atggagcacgagcgcgagaggggaaacctgagccgctgtctgaagctggctcaggagagg
gaggagatggagatggagctccggaagtacacactggaaagaggctcggcgagagaaacg
gagacggagcatttcgactttgagaggagagaggccggcgctaatgagcctgggtgggaa
tataagagcagtacattgccccacagatacaccaagggagggaatgagtgctttggtcgg
tcccagagccctttctcttcatctgatgtgcatagggatttccgttctcttgtccatcct
ctcactctaaccccaggccgcacctgtttcagagcgtcttcaccagcgagtgcgccttgt
tttaagcctggaaaccattacactgctccatcccccaccaaacacacccacctcctatct
gaggaggcaggcagattaactctcccacatctctcctcaaagcagcagaggcatgaaacg
gtagaagcagtaccagagggctatgataattcaccacaatccacagttttagaaatgcaa
acgaatgattcatgctctgaggcatggagacagaacaatcttagtcatagcagcctttca
acgttgtctttccatagcagtaaacatcctgaaagatctaatctgcacctggatgcgatg
ccagactctttagaagcagaagtagcatttcccgaatccgctgatgaagttgtgtgtgtt
gagatgagtgtggacgagccagagttggaggtgtgtgtgacgcagcctgtgaagcccatg
cttcaacacagaattgcctcccatgttcaacatgggcactcgctgggtcgcagaggccgg
cacgaagacgcaactaggagcacaagccttaaccgccgcagtccagcatatccccaaact
cccggaccagaatcctggagagctgggacccacagctttaaactctgtgactctaagcag
cgaagccagagccttgactcccggagacggaaagagaggggtttcctggctcctgatgcg
tggatagactctctcagccaagagaactgctctgttgcgtcttcttgtcgcccacacaca
atgttctgggaaccccagagctctccggtcaggagcatctccatatcttctgcaaattca
ccttctgctgccaaagctgcctcgcggtcatctcctgctgtggatgctttatctctaaaa
agcagcccatacaggcccattccaaaagctgacgtgcctcaccactatgagccaaaaaga
gaggcgtccattgttcccagggttgccaaatggccagttgactaccgggaggcggtgaaa
gaggcagaggtttatctggaggccatgaaggaagcttccacatgcttgccgcatggcaaa
gacgattaccgagaggcactagaattagaggcggggggctccgagggagtgccagagttc
gggagcagctacagcagttatgcaagcagcggccgaggcagcatggagcccgctaacgga
cgcctgtccctgtgtcacctctccccaaccctcaccacctcacccgggacagtagagggg
agccaggggagcacagaggacactcaccaaatggaacaaagccaaaggagaaaggtttca
gttgatgagaattatgagtgggatgctgctgatttctcctcacagctgggaaaccatgac
gacctgcttccttcattgaatctactgaagcctactcaatgccgtagccttgccagaatg
cagcgctccaccaaggcacagacacattgtgctcagccctctttgctcctggggcatcaa
agcagctgctctgctgagccagaagcagaatccgtgctgttctga
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