Etheostoma cragini (Arkansas darter): 117959540
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Entry
117959540 CDS
T07493
Name
(RefSeq) butyrophilin subfamily 3 member A2-like isoform X1
KO
K06745
programmed cell death 1 ligand 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117959540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ecra04090
]
117959540
CD molecules [BR:
ecra04090
]
Proteins
117959540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
C2-set_3
V-set
Ig_2
NACHT
ig
C2-set_2
APS_kinase
ABC_tran
AAA_22
AAA_30
nSTAND3
AAA_16
TsaE
AAA_18
C2-set
DUF6377
AAA_33
AAA
AAA_25
NB-ARC
DEAD
Rad17
PspB
Motif
Other DBs
NCBI-GeneID:
117959540
NCBI-ProteinID:
XP_034752638
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All DBs
Position
16:12514797..12528154
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AA seq
507 aa
AA seq
DB search
MDWALLVVLQIMLQPSLSVLFTVEAEQTTYVSKFGGDVVMGCRFQPKLSNSHADLKVTWH
SMTPIFVRDVYRMDNWKENLASQDSDYRGRVRLLTEELQKGWAKLQVSGLRINDSGTYQC
LVQTEDGADYKKITLSVVAPYENVTKHIRKAAEGDDVLLTCQSKGYPRSSVMWQDGHQRK
LSSNTTAILTPDQLFKVTSEIRVSSSDKNNYTCIFANDVYSATFHIPDEIPVPHVKNDAL
IIVLSIGVIMVVIIVVMLMYRQQKGSRTKSTRKLLVNSQRSVPAAASGRQINKDNEEVIT
ILNEGSMEEHLGAFLKAYYSDTSLSTEVRRHCDAFCVEELPYKLQNNKDQPVNLQALLPE
AGETLFLEGPSGSGKTTVAHILVSSWTKMHTHALSNLLDLSTLRLFLYVDCSKVKGDLFQ
EILIQLSLTEQISGDELRAILTRSSEALLLLDGYREGKDFFDKSLRKFLLEKRGCRVLLM
ACPGHCPTLKDTVGTEGVLHLQTQSMT
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggactgggccctacttgtagttttgcaaatcatgcttcagccatctctctcagtgctg
ttcactgttgaggcagagcaaaccacatacgtctcaaagtttggaggagatgttgtgatg
ggctgcaggtttcagcctaaactatcaaattctcatgctgacctgaaggtgacctggcac
tcgatgacccccatttttgttcgggatgtgtatcgtatggataactggaaggagaacttg
gcgtcccaggattcagactatcggggcagagtaaggcttctcactgaggagctacagaaa
ggctgggccaagttacaggtctccgggctcaggatcaatgactctgggacctaccagtgt
ttggtgcagacagaagacggagctgattataaaaagataactttgtccgttgtagcaccg
tatgaaaatgtgactaaacacattcggaaggctgcagaaggggatgatgtgctgctaacc
tgccagtcaaagggataccccaggtcttctgttatgtggcaggatggacaccagcggaaa
ctcagttcaaataccacagcgatcttaacaccagaccagctttttaaagtcaccagcgag
atacgtgtcagctcatcagacaaaaacaactacacgtgcatctttgcaaatgatgtctac
tctgcaacatttcatattccagatgaaatacctgttcctcatgtaaaaaacgatgctctc
atcatcgtattgagcataggagtgataatggttgtcattatcgttgttatgctgatgtac
cgacaacaaaaaggttcgaggactaaaagtaccaggaaacttttagtcaacagtcaaagg
tctgttcctgctgctgcctcaggtcgacaaataaataaagacaacgaggaagtgataact
attttaaatgaaggtagcatggaggaacatctgggggcgtttctgaaagcctattattcc
gatacctccctcagcacagaggtgagacgccactgtgacgctttctgtgtggaggagctg
ccttacaagctccaaaacaataaggaccagcctgtgaatcttcaagctttactcccagaa
gctggagagactctttttcttgagggaccttcaggaagcgggaagacaaccgtagcccac
atcctggtctcttcttggactaagatgcacacacatgccctctctaacctcctcgatctc
agcactcttagacttttcttatatgttgactgcagcaaagtgaagggtgacttgtttcag
gaaatactgattcagctttctctcacggaacagatatcaggggatgagctgagagctatt
ttaaccaggtccagtgaggcactgctgttgttggatgggtacagagaagggaaggacttt
tttgataagtccttgaggaagtttctactggaaaaaagagggtgcagggtgctgctcatg
gcctgccccggacactgccccacactcaaagacacagttggaacagaaggggtgctgcac
ctccaaacacaaagtatgacataa
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