Etheostoma cragini (Arkansas darter): 117959550
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Entry
117959550 CDS
T07493
Symbol
grin3a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3A
KO
K05213
glutamate receptor ionotropic, NMDA 3A
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04020
Calcium signaling pathway
ecra04080
Neuroactive ligand-receptor interaction
ecra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117959550 (grin3a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117959550 (grin3a)
04082 Neuroactive ligand signaling
117959550 (grin3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117959550 (grin3a)
Ion channels [BR:
ecra04040
]
Ligand-gated channels
Glutamate (ionotropic)
117959550 (grin3a)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
DUF2107
Motif
Other DBs
NCBI-GeneID:
117959550
NCBI-ProteinID:
XP_034752655
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All DBs
Position
16:9722835..9775675
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AA seq
1261 aa
AA seq
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MMETVVMMMMRMMMRMSGPTGRAGTEVSRPLCLLLCALGFLTPCVHSHPQPCQVLKRIGH
TVRIGALHVQPRLLPAPADRGAEDWDTDRGWIGSGERRMELEKQVKRSAGAPGYGSLRSR
GAVNSQRGSSRSKSQARQREENTSREDRVFAPRDSVLLAVEAVNGVGLLPYNLSLELVMA
VGSGLGELPAFSSSSAGSPESEDPLSFVESVCHTVVVQGVSAMISFPRNRDEFINLEFVS
LALRLPVVSVVQKEFTRHSENPLHFQLAMRTVESPPSRLLSTLLMMNGWWDFSILLCQEW
DISDFLLLIKNNTRFHLGTLVNLTTTASTSSPPSSSSSHSGVASGVATSAQASSSSSSSL
PYFSPSATSSTSSVKLDQQQALMRQLDALREPSSTRAVVTFGCEIRDVRRLWTLGTRMAL
PEFHWVLGDSQNVVELRTEGLPLGLLAHGLMGSPSLDHYVHDSVELVARAVGSAAQVDPA
SALIPGTTNCMDVQQSNGSSGEYLSRFLSNTSFEGQTGFISKDTHSQNVISEAHHYIWSL
QLDPLGQPTWTRLGRWHRGNVLMDQRAWPSYQGSGGGGDWRRSTRLHMRVVTLVEHPFVF
TREVDGDGLCPAGQLCLDPLTNESSVLKGFFQNLAGHNHSVPTDLKKCCYGYCIDLLEKL
AEDMGFTFDLYIVGDGKYGGFKNGRWTGLVGDLLSGAAHLAVTSFSINSARSQVIDFTSP
FFSTSLGILVRTRDTAAPIGAFMWPLHWSMWLGIFVSLHVTAIFLTLYEWHSPFGMTPRG
RNRDRVFSFSSALNVCYAILFGRTVAIKPPKCWTGRLLMNLWAIFCLFCLSTYTANLAAV
MVGEKTYEQLSGIHDPKLHHPSQGFRFATVRESSAEDYLKKSFPEMHDYMRRYNVPATPD
GIHELKADPQRLDAFIMDKALLDYEVSIDADCKTLTVGKPFAIEGYGIGLPQNSPLTSNI
SELVSQYKSDGFMDTLHDKWYKVVPCGKRSFAVTETLQMGIKHFSGLFVMLCVGVALSLL
TTIAEHIVYKLVIPRVKEPRFKYWLHTSQRLHRALNSVFIDDKLPTVTKPEKRCNEGNNQ
SACWNPSESSHCNRRRVLPQEMQNDLECPSSQDLPPPPPPSPQPHPHCLPLLAKHLPIVT
NSNGRSDLLGRGLGQGLGPGQGGSGQGITRLGVGDSGPGLGVGRTPLVQELSELEGQILL
IKQQLQSAMRRKRELEQYQSENQQANQTAPSQPTTHRSNQLAQYSQSHQQTNQHTNTLPE
F
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacggtggtgatgatgatgatgaggatgatgatgaggatgagtggcccgaca
ggtcgagcaggcaccgaggtctcgcgaccattatgtctactgttgtgcgctctaggcttc
ctcacgccgtgcgttcattctcacccgcagccgtgccaggtgctgaaacgcatcggccac
acggtacgaatcggggctctgcacgttcagcctcgcttgcttcccgcccctgccgaccga
ggtgctgaggactgggacaccgaccgaggttggatagggagcggagagcggcggatggaa
ttggaaaagcaggttaaaagaagtgccggtgcgcctggatatggaagcctcaggtctaga
ggcgccgttaatagccagcgaggatccagcaggagtaagagccaggcacgacagcgagag
gagaacacatcgagagaggaccgcgtgtttgcaccccgagactcggtccttctcgcggtc
gaggctgtcaacggggtcggattgttgccatacaatttatccctggagcttgtcatggcc
gttgggtcaggactcggcgagctgcccgcgttctcctcctcctctgcggggagccccgag
agcgaagacccgctgtccttcgtggagagcgtgtgtcacaccgtggtcgtgcagggggtt
tccgccatgatctcctttccacggaaccgggacgagttcatcaacttggaatttgtctcg
cttgcgcttcggttgccagtagtcagcgttgtgcagaaggagtttacgcgccacagtgag
aatcctctccatttccaactagcgatgcggaccgtggagtccccaccatcccgtctcctc
tctaccttgctgatgatgaatggctggtgggacttcagtattctgctctgtcaggagtgg
gacattagcgacttcctgctcctcattaagaacaacacccgtttccacctgggcaccctt
gtcaacctgacaactaccgcctcaacctcgtcaccgccttcttcatcatcatcacactca
ggggtggcctcaggtgtcgcaacaagtgcgcaggcctcgtcatcctcatcgtcgtctttg
ccttacttctctccctctgctacttcgtccacttcctccgttaaattagaccagcagcaa
gctctcatgcggcagctggatgccctgagggaaccttcctccacaagggccgtggtgacc
tttgggtgtgagatccgcgatgtgcggcgtctgtggacgctgggcactcggatggcgctc
ccagagtttcactgggttttgggggacagccagaatgtggtggagctgagaacagagggg
ttgcccctggggctacttgcacacggactcatgggttccccttctctggatcactatgtc
catgactcagtggagctcgtcgcacgggcggtgggcagtgcagcccaagtggatcctgcc
tccgcactcatacctgggactactaactgtatggatgtacaacagagcaacggcagctcg
ggagaatacttgtcaagatttttatccaacacatcatttgagggccagaccggttttata
tccaaagacactcacagccagaatgtcatctcagaggcccatcactacatctggtccctc
cagctggaccccctaggccagccaacctggacccgcctgggacgctggcacagagggaac
gttctgatggaccagcgggcctggccaagctatcagggatctggaggtggaggagactgg
cgccgatccacacggctgcacatgcgggtggtgacgctggtggagcacccgtttgtattc
acccgagaggtggacggagatgggttgtgtcccgcgggccagctgtgcctcgacccactc
accaatgaatcttcggttttgaaaggatttttccagaaccttgcgggacacaaccattct
gttcccacagatctgaagaagtgttgttatggttactgcattgacctgctggagaagctg
gcagaggacatgggcttcactttcgacctctatattgtaggcgatgggaagtatgggggg
ttcaagaatggtcgctggacaggattggtgggtgatctgctcagtggcgctgcccacctg
gcagtgacatctttcagcatcaattcagccagaagccaagtcattgacttcacctcgccc
ttcttctccaccagcctgggaatactggttcgtactcgcgacacagctgcacccattggt
gccttcatgtggcctctccactggtccatgtggcttggcatctttgtctccctccacgtc
accgccatcttcctcaccttgtatgagtggcacagcccgtttggtatgacgccacgtgga
cgcaaccgcgaccgggttttctccttctcctcagctctaaacgtgtgctacgccattctc
tttgggagaacagtggccatcaagccgccaaagtgctggacaggccgcctgctaatgaac
ctctgggccatcttctgtctcttctgtctgtccacctacactgctaatttagctgccgtc
atggtcggggagaagacctatgaacaactgtcagggatacatgacccaaagttgcaccat
ccctctcagggattccgatttgccacagtgagagaaagcagcgcagaggactacctcaag
aagagtttccctgagatgcacgattacatgagaagatacaatgtcccggcaacaccagat
ggaattcacgagctcaaggctgaccctcagaggctggatgctttcatcatggacaaggct
ctgctggactatgaggtctccatagatgcagactgtaaaacactaacggtcgggaaaccc
tttgccatagaaggctatgggattggactcccacagaactcgccactcacctccaacatc
tcagagcttgttagtcagtacaagtcagatggcttcatggacacgctgcatgacaaatgg
tacaaggttgtgccctgcgggaagcgcagcttcgctgtgactgagacgctgcagatgggc
ataaagcatttctctggtctttttgtgatgctctgtgtgggcgtggccttatctctactg
accacaatagcagaacacattgtgtacaagctggtgatcccgagagtcaaggagccacgc
ttcaaatactggctgcatacaagccagagattacaccgggccctcaactcagtcttcatt
gatgacaaactgccgacagttaccaagccggagaaaaggtgcaatgaggggaacaaccag
tcagcatgttggaatccttcagagtcctctcactgcaacaggcgtagggtccttccacaa
gagatgcagaatgacctagaatgcccatcctcccaggatcttcctcctccaccacccccg
tctccgcagcctcatccccattgtcttcctctactggcgaaacacctacccatagtgact
aactctaacggtcgctccgacctgttagggcggggcttgggccaaggacttgggccaggg
caggggggctccgggcagggcataacacgtttgggtgtgggcgactctggcccaggcctt
ggtgtgggtcggaccccgctggttcaggagctgtcagaactagagggtcaaatcctctta
atcaagcagcagctgcagtcagccatgaggaggaagcgagagctagaacagtaccaatca
gaaaaccagcaagcaaaccagactgcacccagtcagcccactacgcatcggtccaaccag
ttggctcagtatagccagtcccaccagcagactaaccaacacacaaacacgctcccggag
ttctga
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