Etheostoma cragini (Arkansas darter): 117959743
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Entry
117959743 CDS
T07493
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
117959743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117959743
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
117959743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_C
XLF
Motif
Other DBs
NCBI-GeneID:
117959743
NCBI-ProteinID:
XP_034752914
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All DBs
Position
16:complement(24207708..24226558)
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AA seq
366 aa
AA seq
DB search
MHVSVREVHVSSEPDSSFFLRVDWKGRGLGSGFQVLLTDGQDAWRGDVSEAGVCREAEEL
EMQPERYVQDLERALTETESSVTYSFTLTPSPAARRSALTLAYEKVQKDISAQYSQDAQT
GRTKATSTGSPSNTESTEILLLTYNLAPPFLSDPPTRLLKTIRTKSEGQKKDNSAISNRA
AGQEEDDYTGSTDEEPEEVMSSAASVSSARGRSTASPLDDSLKDIPDVAPCRKRRFRHVE
APAAEPQSSQRKSLRFYSQTRRNWVQVPPKASDCKPCHMQMAVGGAIPRSRGRCPLPLSS
GQLQQAAAASSVWGLLSAPTHELNLASRGRNRSRHVRPSAPCVRVSGGPPRQGRADPPLN
RSLVSS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtgtctgtgcgggaagtccacgtctcgtccgagccggactcgtccttcttcctg
cgggtggactggaaggggcggggcttaggttcaggcttccaggtgctgctgactgacgga
caggacgcctggagaggagacgtgagcgaggcgggcgtgtgccgggaggcggaggagctg
gagatgcagccggagcggtacgtgcaggacctggagcgggcgctcaccgagacagagagc
tccgtcacctacagcttcacgctgacgccgtctccagccgcccgccgctccgcgctcacg
ctggcgtacgagaaggttcagaaggacatctctgcccagtactcccaggacgctcagacc
gggagaactaaagcaacctccaccggctccccctcaaacacagaatctactgaaatactt
ctcctcacatacaacctcgcccctccattcctctccgacccccccacccgcctcctcaag
accatcagaaccaagtcggagggacagaaaaaggacaactcagcaatatcgaaccgggcg
gccggacaggaagaggacgactacacaggaagtaccgacgaggagccggaggaagtgatg
tcgtctgcagcctccgtgtcatcggcccggggacgctctactgcgagcccattggacgac
agccttaaggacatcccggacgtcgccccctgtcgcaagcggcgcttccgccacgtggag
gcgccggccgccgagccccagagctcccagagaaagagtctccgtttctactctcaaacg
cggagaaactgggtccaagttcctccgaaagccagcgactgtaaaccgtgccacatgcag
atggccgtgggcggtgccatccctcggagccggggccggtgcccattacctctcagctcg
ggccagctccaacaagcagcagcagccagctctgtgtgggggctcctgagtgccccgacg
catgagcttaacctcgcctctcggggtcgaaaccgctctcgtcacgttcgcccctctgcg
ccatgtgttcgagtctccggtggtcctccgcggcagggcagagcagatcctccactgaac
aggtctcttgtttcctcttaa
DBGET
integrated database retrieval system