KEGG   Etheostoma cragini (Arkansas darter): 117959743
Entry
117959743         CDS       T07493                                 
Name
(RefSeq) DNA repair protein XRCC4-like
  KO
K10886  DNA-repair protein XRCC4
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    117959743
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecra03400]
    117959743
DNA repair and recombination proteins [BR:ecra03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     117959743
SSDB
Motif
Pfam: XRCC4 XRCC4_C XLF
Other DBs
NCBI-GeneID: 117959743
NCBI-ProteinID: XP_034752914
LinkDB
Position
16:complement(24207708..24226558)
AA seq 366 aa
MHVSVREVHVSSEPDSSFFLRVDWKGRGLGSGFQVLLTDGQDAWRGDVSEAGVCREAEEL
EMQPERYVQDLERALTETESSVTYSFTLTPSPAARRSALTLAYEKVQKDISAQYSQDAQT
GRTKATSTGSPSNTESTEILLLTYNLAPPFLSDPPTRLLKTIRTKSEGQKKDNSAISNRA
AGQEEDDYTGSTDEEPEEVMSSAASVSSARGRSTASPLDDSLKDIPDVAPCRKRRFRHVE
APAAEPQSSQRKSLRFYSQTRRNWVQVPPKASDCKPCHMQMAVGGAIPRSRGRCPLPLSS
GQLQQAAAASSVWGLLSAPTHELNLASRGRNRSRHVRPSAPCVRVSGGPPRQGRADPPLN
RSLVSS
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgcacgtgtctgtgcgggaagtccacgtctcgtccgagccggactcgtccttcttcctg
cgggtggactggaaggggcggggcttaggttcaggcttccaggtgctgctgactgacgga
caggacgcctggagaggagacgtgagcgaggcgggcgtgtgccgggaggcggaggagctg
gagatgcagccggagcggtacgtgcaggacctggagcgggcgctcaccgagacagagagc
tccgtcacctacagcttcacgctgacgccgtctccagccgcccgccgctccgcgctcacg
ctggcgtacgagaaggttcagaaggacatctctgcccagtactcccaggacgctcagacc
gggagaactaaagcaacctccaccggctccccctcaaacacagaatctactgaaatactt
ctcctcacatacaacctcgcccctccattcctctccgacccccccacccgcctcctcaag
accatcagaaccaagtcggagggacagaaaaaggacaactcagcaatatcgaaccgggcg
gccggacaggaagaggacgactacacaggaagtaccgacgaggagccggaggaagtgatg
tcgtctgcagcctccgtgtcatcggcccggggacgctctactgcgagcccattggacgac
agccttaaggacatcccggacgtcgccccctgtcgcaagcggcgcttccgccacgtggag
gcgccggccgccgagccccagagctcccagagaaagagtctccgtttctactctcaaacg
cggagaaactgggtccaagttcctccgaaagccagcgactgtaaaccgtgccacatgcag
atggccgtgggcggtgccatccctcggagccggggccggtgcccattacctctcagctcg
ggccagctccaacaagcagcagcagccagctctgtgtgggggctcctgagtgccccgacg
catgagcttaacctcgcctctcggggtcgaaaccgctctcgtcacgttcgcccctctgcg
ccatgtgttcgagtctccggtggtcctccgcggcagggcagagcagatcctccactgaac
aggtctcttgtttcctcttaa

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