Etheostoma cragini (Arkansas darter): 117959840
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Entry
117959840 CDS
T07493
Symbol
sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117959840 (sec16a)
Membrane trafficking [BR:
ecra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117959840 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec16_C
Sec16
Motif
Other DBs
NCBI-GeneID:
117959840
NCBI-ProteinID:
XP_034753081
LinkDB
All DBs
Position
16:complement(18353940..18371372)
Genome browser
AA seq
2407 aa
AA seq
DB search
MQPPPRTGPPGASCPPPSGPNMFRRTRPHKHTTAATATIPPATQPMMDPFSFVRAPPPMA
TSGLPTIPNSNPPPMQAPPNTMYSQAGSGLPPQPQTLEDVPAAPPGLPPSSLPGVTLFNP
HSTASPGVYPVPGPAAYASSHSEQGYFNSTEPTSSVATESPPVASAPAPGQALFNQEFQG
QPPPQPVPFQPVPPTTSYSQWAPDNRSRPPSVQNYFQPTSDPLPQPFNLPPHPQMYSSHT
PSPHHNTPTPPTQPGHPQIQAPLPPQNPENAPSSQWPDQNAPQQHNSHFQTQSYFSQSSA
PQDAWFNIPPQDSGYHQMGAGLAHPQPRPDSAGSHHLSNTGPGPNSAPAPVSVSYSQESG
TLSMFFKDNDVENEETLAGERTKAMNGIPGSLQHHSNPQAHVGNADVPLEYQGPSLQDHS
HLPYMNDSNHAPQESIQKPPNSRYDHVENLECVPNQEVLPSEIHGSPAATAAPGVDQFET
GPNLETPDSIPRPIRSASVSSNYSNMSHGSGSGPRRHQGVVGTFIQQESPRLTDDANLPA
AAGGYFEQIDTSPAGDMGAQKSSLEQMWPPTPSPPKPTGIFQASANSSFEPVRSHGVGVR
PAEVDRAKVVAEGGADSTPGNLEQPPDNMENIFASGHPLPTEAGGGVPHLPHPVVHTHSR
PSSRAFGASRPCESPATTLWAQHDPTSLGANILLAPAAPTVLAPLREPSADVIQPPEDGP
LDLQPSQRIQPISQQHSENLENPPKVSEPEPIDLQGNLGYASLLVSDSLHQPVLIAPPVS
NYSVIPHSAPAQPPSQSSLKETTPPVRLLAQGHGASTSQSPSVTSNQNPVFAPGPISFSP
TASNQGPLNLTRENTEPATSAITAPPQSQAVRPPLSMGQSLGGDSHSALQVNSQASLVTA
PLSNHNQPSNYELLDFSMHQSQAQIHAPGHPSSLHESSQSSNGFYLQVTKDAQQGVRARG
NIPVQTLVSSSTPQVPPAPSQAAANIQPPQAEPPKTSDSQNSLPGQNYASPVPVSGTQPS
RDQYPPPALRPAAGSALPPAAYPQGPQGPVPPGASQPAPAEPPRPPSSAGSQQGYGPPPP
VPGQMYSGYYGNYGEYPDGRAPYPPGQYPPPPGDPRAQQYYQDGPYRGRADPWYGRYEGQ
APAYRDPNYQYREPQPERPSSRTSQYSDRPSSRQGYPDDYHRANQSAYNEYYADYAKHYD
YPGYNYGQYDPRYRGYFDQSYWANYDYYNQQAYPARKEGYDDQWRYYPGYDASFDDDFRR
RGETYADDFDRRSVHSEQSAHSVHSSQSHNSRRSSFSSRSQQSQVYRSQPDLVSAVYDTT
SSTLAVDYSYGQYPNPTDATQNYSQYLYPSEYNADSTWIAPDQPPPRPATPEKFTIPHRC
ARFGPCGHLIQVLPNLPSAGQPALVDIHNMETMLQDTPEQAELRAFPGPLIKEETHKVDV
IKFSQNKALECSRDSNLLDKDSARLLWEFIMLLCRQNGTVVGTDIADLLLKEHRSVWLPG
KSPNEANLIDFNNEPLARAEEEPGAGPLSLLSDTFMTVPENLGKETERFRELLLFGRKKD
ALEAAMKGGLWGHALLLASKMDNRTHARVMTRFANSLPINDPLQTVYQLMSGRMPASATC
CGEEKWGDWRPHLAMVLSNLTHTLDLDTRTITTMGDTLASKGLIDAAHFCYLMSQVGLGV
YTKKSTKMVLIGSNHSLPFYQCATNEAIQRTEAYEYAQSLGSHPCSLPNFQVFKLIYACR
LAEVGLSAQAFHYCEVISKNVLMQPSHYSPIFISQIIQMSEKLKFFDPQLKEKPEQELFN
EPEWLTHLRQLDGQIRTGVITYNEDRATPSQFDCSSPSSDLDQPRSPEPYSMPVELDGPT
PDNPLMSSLLPGPPPQGVQLMPPAPTSILQDGMAPSQPLSSIDVPQFYPVPPSGPPGQMP
IYPPQDPGFAPPSFQHEQTEMYPGAHQQPCPPPSQVGQMSPQMPPPQGPHSPVKLNYPPP
QMPQHMPQHMPPSPGHMPFGEPVFHAPPEMHPAQPISSSPPRNSFTPQLDLYDQMAIMGP
GRRTRTASQSSMNMASGRRSRTTSESSTHSGGRERSNSAVKQASPPPPSIPEQPCIEENK
KVKKDSPKKGGGGGGGGGVGGWITRIWKGKNEAHLPDDKNKSIVWDEKKQRWVDLNEPEE
ESKPVPPPPPGFPKMPQMPGPGGPAPPPGSGPPVNMFSRRAGTKGRYVDVLNPSRMAKPS
GSAPAPADIFAPLAPMPMTGNLFVPSSAPADQQPLEASEGGDQKQNSPNTSAAPQMFNPT
LPPAPEGAPVADGSHSGELSRSSSMSSLSREVSQHLNQVPLAGPQMVHSHPCLQPTARAQ
HITSSMLHQLHLKLRRPSNPDTCLLTFPLSPALLTLLCICNEQPNPANAQQIKMNQSCSD
YKEVSYF
NT seq
7224 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccctcctcggactggacctcctggtgcctcatgcccacctccttctgggccc
aatatgttccgcaggaccaggcctcacaagcatacaacagcagctactgccacaatccca
ccagctactcaacccatgatggaccctttttcgtttgttagagctcctccccctatggct
acaagtggtctcccaacaataccaaacagcaacccaccaccaatgcaagccccacctaac
accatgtactctcaagctggctcagggctgcctccacaaccacagacactggaagatgtc
ccagctgctccccctggtctcccaccatcctctctaccaggggtgacattgttcaaccct
cacagtacagcatcccccggtgtttacccagtacctggtccggcagcatatgcatcctca
catagtgaacagggctattttaattccacagaaccgacctcatccgtggccacagaatca
ccacctgtggcctcagccccagcaccgggtcaggcactgtttaaccaggaatttcaagga
cagcctcctcctcagcctgtgcccttccagcctgtgcctcccaccacctcctattctcag
tgggcccctgataacagaagtcgccctccatcagttcagaactatttccagcctactagt
gaccctctgccacagccttttaatttacctccgcacccccagatgtactcctcccatacc
ccatcaccccatcacaacacccccacccctccaacacaacctggacatccccagattcaa
gctcctcttcctccccagaaccctgaaaatgccccgagttctcaatggcctgaccaaaac
gcaccccagcagcataattcccacttccaaactcagagctacttcagtcagagctctgcc
ccccaggacgcatggttcaacatacctccacaagactcaggctaccaccaaatgggggct
ggcctggcccatcctcagccccggcctgactctgctggatctcaccacttgtccaacaca
gggcctgggccaaattctgcccctgccccagtctcggtatcatactctcaggagtctggt
acgctctcaatgttcttcaaagacaatgatgtggaaaatgaagaaacactggctggagag
agaactaaagcaatgaatggtattcctggatccttgcagcatcacagcaacccacaagcc
cacgttggcaatgcagatgttcctttggaataccaaggaccttctctgcaagatcattca
cacctaccatacatgaatgatagcaaccatgcaccacaggaaagtatccagaaaccccct
aattcccggtatgaccatgtagagaatttggagtgtgtcccgaaccaggaagtattaccc
agtgaaatccatggcagccctgctgctactgcagcccctggagtagaccagtttgaaact
ggacctaacctggagactccagattctattccaagaccaattagatcggccagtgtgtcc
tccaactatagtaatatgagccatggaagtggaagtggccctcgtcggcatcagggagta
gtaggcacttttattcagcaggaaagtccacgtctcactgatgatgctaacctgcctgct
gccgctggaggctactttgagcaaattgacacttctccagctggagatatgggtgcgcag
aagagctccctggagcaaatgtggcctcccacacctagtcctcccaaaccaactggtatc
tttcaggccagcgctaacagctcttttgagcctgtgcgctcacatggggttggggtgcgt
cctgctgaagttgatagggctaaagtggtagcagaagggggtgcagattctacaccaggc
aacctagagcagccaccagataacatggaaaatatttttgcctcaggacaccccctgcct
accgaggctggaggtggtgttcctcatctgccacacccagtggttcatactcactctcga
ccttcatcccgtgcttttggggccagtcggccctgtgagagtccggccactactctgtgg
gctcagcatgatcctacgagcttgggcgccaacatcctcctagcccctgctgccccgaca
gttcttgctcctttacgagagcccagtgctgatgtcatccagcctccagaggatggccca
ctggacctgcagccctcccagagaatccagccaatttcacagcaacactcagagaaccta
gagaacccaccaaaggtgagtgagccagagccaattgacctgcaaggcaacctgggctat
gcatctctccttgtgtccgactcactccaccagcctgttttaattgccccaccagtatcc
aattacagtgtgattccccacagtgcccctgctcaaccacccagtcaaagtagtcttaag
gaaactaccccccctgtaagactactcgcacaaggacatggtgccagtacgtcccaatca
ccttcagtaacctcaaatcagaatccagtgtttgctcctggacctataagcttcagtcct
acagcctctaaccagggcccgctcaatctgacccgagaaaacacagaaccggcaacatca
gcaatcacagctccaccacagtctcaggcagtccgccctcctctttcaatgggccaatca
ctgggtggagacagccactctgctctccaagttaattcacaagcttctctcgtgactgct
cctctctctaatcataaccaaccatccaattatgaactgcttgatttttctatgcaccaa
tcacaagctcaaatccatgcacctggccatccttcctctctacatgagtcttcacagtct
agtaatggattttacctacaggtcaccaaagatgctcagcagggggtaagagcgagaggg
aatatccctgtccagaccctggtctcttcatctaccccacaggtaccaccagcaccctcc
caagcagctgcaaacattcagccgccacaagctgaacctcccaagacatcagattctcag
aattcactgccgggacaaaattatgcttctcctgttccggtgagtggaacacaaccttcc
cgtgaccagtatccacctccagcactgaggcctgctgcagggagtgctcttcctcctgct
gcataccctcaagggcctcaaggaccagttcctccgggagcttcccagccagctcctgca
gagccacctcgaccaccctcttctgcaggcagccagcaaggatatgggccccctcctccg
gtgccagggcagatgtatagtggctattatggtaattatggagaatacccagatggcaga
gcaccttatcctcctggccagtacccacctccacctggggaccctagagcacagcaatat
tatcaagatggtccatacaggggcagagcagatccttggtatggcagatatgaaggacag
gccccagcgtatcgtgatccaaactaccagtacagagagcctcagccagaacgacccagc
tccaggactagtcagtactctgacaggccctcatccaggcaaggctatcctgatgattac
cacagagcaaaccaaagtgcctataatgaatattatgcagattacgccaagcactatgat
tatccaggatataactatggacagtatgacccgcggtacagaggatactttgatcaatcc
tactgggctaattatgactactataatcaacaggcgtatcctgccaggaaagagggctat
gatgatcagtggcggtactatcctggttatgatgccagttttgatgatgatttccgtcga
cgtggagagacgtacgctgatgattttgaccgacgcagtgtccacagtgagcagtcagca
catagtgtgcacagctctcaaagccacaacagcaggcgaagcagcttcagctcacggtca
caacagagccaggtataccgaagccagcctgacttagtatcagcagtctatgacaccaca
tcatccactttggctgtggactactcctatggacagtacccaaatccgactgatgctacc
cagaactacagccagtacctctatccctcggagtacaacgcagacagcacctggatcgcc
cctgatcaaccgcctcctcgtcctgcaacaccagagaagttcaccataccccatcgttgt
gcacgctttggaccttgtggtcatctgattcaagttcttcccaatctcccctcagctgga
cagcctgctcttgttgatatccacaacatggagaccatgctgcaggataccccagaacaa
gcagaactacgagctttccctggacctcttatcaaagaggagacccataaggtggacgtg
ataaagttctcccagaacaaagcgcttgagtgttctcgtgacagcaacctcttggacaag
gactctgcccgtctgctctgggaattcattatgctgctctgtagacagaacgggactgtg
gttggcacggacatcgctgacctcttgctgaaggagcatcgctctgtctggctaccggga
aaaagtcctaatgaagccaacttaattgattttaataatgaaccgctggcacgagctgaa
gaagagccaggagctggaccactgtccctcctatctgacaccttcatgactgtcccagag
aaccttggcaaggaaacggaacgctttagggagctgctactgtttggccgcaagaaggat
gcgctagaagcagctatgaagggaggtctctggggccacgccctgctgttggccagtaag
atggacaacaggacacatgcacgtgtcatgacaaggtttgccaacagtttgcctatcaat
gaccctctccagactgtgtaccagctgatgtctgggaggatgcctgcatcagccacttgc
tgcggcgaggagaagtggggtgactggcgtcctcacttggccatggtgctgtctaacctc
acacacactctggacctggatactcgcacaatcaccaccatgggtgacactctcgcttcc
aaggggctgattgatgctgcacatttctgctacctgatgtcccaagttggtctgggagtg
tacacaaagaagagtaccaagatggttctgattggctccaaccatagtttgccattttac
caatgtgcaacaaatgaagctatccagaggactgaggcctatgaatatgcccaatctctc
ggctcccacccatgctcactacccaatttccaggtgttcaagttgatctatgcatgccgt
ttggctgaagtaggcctcagtgctcaggccttccactactgtgaagttatttctaagaat
gtcctcatgcagccatcccattactctcctattttcataagccaaatcatacagatgtcg
gaaaagctgaaattcttcgatccacaactgaaggagaagccagagcaggagttgtttaat
gagcctgaatggctgacccacctcagacagctggatggacagataaggactggtgtgatt
acatacaatgaagacagagcaactccttcacagtttgactgcagcagccccagctctgac
ttggaccagcccagatcacctgaaccttacagcatgcctgtggagttggatggtcccacc
cctgacaacccactgatgagctcattactgcctgggcctccgccgcagggagtacagctg
atgcctccagctcccacctctatcctccaagatgggatggccccttctcagcctttaagc
tccattgatgtgccccagttctacccagtaccccccagtggaccaccaggccagatgccc
atctaccctcctcaggatcctggctttgcccctccttccttccaacatgagcagactgag
atgtacccaggagcccatcagcagccgtgtcccccaccttcccaagtgggtcaaatgtca
ccacaaatgccccctcctcaggggccacattcacctgtgaagttgaactacccaccaccc
cagatgccccagcacatgccccagcacatgcccccttctcccggccacatgccatttgga
gagcccgtgttccacgctccaccagagatgcaccctgctcaaccaatatcatcctcccca
cccaggaactccttcacaccacagctggacttgtatgaccaaatggctattatgggtcct
gggaggagaacaaggactgcttcgcaatcgtcaatgaatatggcttcaggacgtcgctct
cgcaccacctctgaatcctccactcactctggcggaagagagaggagcaattcggctgtc
aagcaggcctctccacctccaccttcaattcctgaacagccctgcatagaagagaacaaa
aaagtcaagaaagactccccgaaaaagggtggtggtggtggtggtggtggaggagttggt
ggctggataacgcggatctggaaggggaagaatgaggctcacttgccggatgacaaaaac
aaatctattgtgtgggatgaaaagaagcagagatgggttgacttgaacgagcctgaagaa
gagagtaagcccgttccaccacctcctcctggtttccccaagatgccccagatgcctggc
cctggagggcctgctccacccccgggtagtggtcctcctgtcaacatgttctccaggagg
gcaggcacaaagggcagatatgtggatgttctgaaccccagtagaatggctaaaccgagc
gggtcagcccctgctcctgcagacatcttcgctcctttggcaccaatgcccatgaccggt
aacctatttgtgcctagttcagctcctgctgatcaacaacctttagaggccagcgaagga
ggagatcagaagcagaattcaccaaataccagcgctgctccacagatgttcaacccaacg
ttaccacctgccccagaaggtgctcccgtggccgacggctcacactccggggagctctcg
cgttctagctcaatgagttctttatcacgcgaagtgagtcagcatttaaaccaggtacct
cttgctgggcctcaaatggtccactctcacccctgcctgcaacccaccgcccgagctcag
cacattactagtagcatgcttcaccaattgcacctaaagcttcgccgcccatctaaccca
gacacctgcctgctcaccttcccgctgtctccagcacttctaactctactctgtatatgt
aatgaacaaccaaacccagcaaatgctcaacaaattaaaatgaatcagagttgcagtgac
tataaggaagtttcttatttttag
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integrated database retrieval system
