Etheostoma cragini (Arkansas darter): 117959845
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Entry
117959845 CDS
T07493
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3 isoform X1
KO
K06247
laminin, gamma 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04510
Focal adhesion
ecra04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117959845 (lamc3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117959845 (lamc3)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
GPS2_interact
Motif
Other DBs
NCBI-GeneID:
117959845
NCBI-ProteinID:
XP_034753092
LinkDB
All DBs
Position
16:complement(19239809..19335349)
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AA seq
1638 aa
AA seq
DB search
MDSSFAVSSLPLALLFSLHLHSHLLVWAAMDSCYDEEGAPSRCMPKFENIAFNRTVVTSN
VCGSPPEDYCMQTGSTRSCHHCDASDPDLSHNASLLTDFNRNEEPTWWQSQSMYYGIQHP
NSVNLSLHLGKAFEITYIRLKFYTSRPESFAIYKRTEVDGPWLPYQYYSASCMKTYGKDA
KGYIRPGDDEKTALCTDEFSDISPLTGGNVAFSTLEGRPGAYNFDQSVVLKEWVTATDLL
ISLDRLNTFGDEFFKDAKVLRSYFYAISDFSVGGRCKCNGHASECVDGEHLGLVCSCQHH
TVGDDCQRCHPFYQDRPWARATGDSANECLKCNCSGRSDECVFDMEQYRSTGSGGRCVSC
RDNTDGPHCERCRENHYRKSAEEPCLPCNCNIDGSVSLQCDVEGRCACRVGVTGEKCDTC
RAGFHSLGPGGCRSCECDPSGTVDNCSPLDGRCHCKPNVEGQSCDRCKPGFFNLQQVNPA
GCQACFCFGHSLACSSSNHYEAINISSDFIEDQDGWLGEFSAGQEYPLLWKEGEVYLLPL
TVEDTGFYKAPEKFLGHQVFSYGQLLSITFTSETTELLPDRVTLLLQGSGVTLSADLSPQ
PVLDLDSGFTSQHSFIVRLHENEMRFEPPLSPFKFQQLLNNLTTLRISNAGGQNYTSQLA
GVTLTSAFLSAGPANPPAPWVESCSCPPGFAGQFCERCTPGFTWEDPSRGSLSRCVPCNC
HQHGTCHPETGVCECSDFTTGMTCEHCLDGYYGNALIGTRGDCQPCPCPDRTSCTEIAET
GQVVCTNCPTRQTGIRCQMCEDGYYGDPLGHSGAAQPCVRCNCNGNVDFNALGICDHITG
RCLKCLRHTEGEHCQRCQQGFYGDALNQTAGQKCKPCSCNPGGTSGHVNECHPQTGNCQC
LAQVTGRDCSYCEVGFFNLQPGAGCERCKCNPIGSSSIACQPITGQCVCRAGVKGRLCDS
CRVGFFGFSSQGCRACNCDPMGSISMQCHSNGTCHCRQGFVGYKCDKCELNYFHNTATHQ
CEECPVCYGLLKKQAEKLRTRLQNLEKLLAPFDCRGRFGEQHHLLKYHMARLYEHEHQRE
DILPNALEDFLAFQEAREAFIKQFSLLEASTGTLLAQLHGITSALNCSISMTGEEGKDRR
KDEGSRGVCQTFTETRFMVRVSQKQLKQATVDLDNMIIPFEVVSGPNKWNMMVNDSQSLM
KSHKETAEHIEAIASRAVSASEQTLAFLMDLLQDNSTEEYIMNLTEQITQMQQQKENLTA
QVNETVAKQLVLKGEAAALKLALGNITSSLHQLALTDASPSTEPDQTQLNLTYPTNHTTK
WGEDLLKQTEELDRQIQTKDHLISKIREEMEPLKLTANKKLEIVDDISELHAHAQGAKVM
ALSSVVTGKEVESDAIALHRELEYMVREWPRQQAQTKAAIKKERPLEEKVLADVRKRVSQ
IAKMLIPALENSSLSSNTTKEAEQTAHAVAKESKAILTQAKHTRTASAHLSSHIDSALQQ
LAEQEMQTDAANSQITSEPAVTLTSVKEDMEAAKLQLKAYSVTLTELISKIDGNMQLERF
DRILNETARRLSMLRGSVESPALGMKIQKLHLAAKEQQSRMSIIEQDLEEIIEERDSLRD
IALNLPQSCPQATGAGKV
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atggattcatcatttgctgtgagctctcttcccctggcccttttattctctcttcatcta
cacagccacctccttgtttgggccgcaatggactcttgctatgatgaagaaggcgcccca
agccgctgcatgcccaagtttgagaacattgccttcaatcgtactgtggtgacatcaaat
gtgtgcggttccccacctgaggactactgcatgcagactggctcaacgcgctcatgccac
cactgtgacgcatcagatcccgacctgagccacaatgccagcctcctgacagacttcaac
aggaatgaggagccaacatggtggcagagccaatccatgtattatggtatccagcacccc
aattctgtcaacctttccctccacctggggaaggcttttgagataacctatatacgattg
aaattctacaccagtcggccggagagcttcgccatctacaagcgcacggaagtggatggg
ccctggttgccttaccagtattacagtgcttcttgtatgaagacctatgggaaggatgct
aagggttacatacgccccggggatgatgagaagactgctttatgtacagatgagttcagt
gatatctctccactcactggaggaaacgtggctttttccaccctggaaggaaggccaggt
gcatacaactttgaccaaagcgtggtgttgaaggaatgggtgacagccactgacctgctc
atctctttggacaggcttaacacttttggagatgagttcttcaaggacgctaaagtgttg
cgctcctacttctatgccatctctgatttctctgtaggtggcagatgtaagtgtaacggt
cacgccagcgagtgtgttgatggggaacatctgggcctggtctgttcctgccaacatcac
actgttggagatgactgccagagatgtcaccccttttaccaggacagaccctgggccagg
gccactggagactctgccaatgagtgtttgaagtgtaactgcagtggaaggtcagacgag
tgcgtgtttgacatggagcagtaccgaagcactggcagtggggggcgctgtgtgagctgc
agagacaacactgacgggccccattgtgagcgctgcagagagaaccactacaggaagtct
gctgaagaaccctgcctaccctgcaactgcaatattgatggttcagtgagtctgcagtgc
gatgtagaaggaaggtgtgcatgccgagttggcgtgacaggggagaagtgtgacacatgt
cgggctggctttcactcgcttggccctggaggctgcaggtcgtgtgaatgtgaccccagt
gggactgtggacaattgctctcctctggatggacgctgtcactgtaagccaaatgtggag
ggacagagctgtgacagatgcaagccaggctttttcaacctacaacaagtgaacccagca
ggctgccaagcatgtttttgctttggccactcgctggcctgctcttcgtccaatcactat
gaggctattaacatctcttctgacttcattgaagatcaggatggctggttgggagagttc
tcagcaggccaggagtaccctctgctgtggaaggaaggtgaagtctacctgctgcctctt
acggtggaagacactggcttctacaaagcccctgagaaattcctgggtcatcaagtcttc
agctacggccagctcctctccatcaccttcacctctgagaccactgagctgcttcctgac
cgagtcaccttgctactccaaggctctggagtcaccctgtctgctgacctttcaccccaa
ccagtgcttgaccttgactccggcttcacatcgcagcactccttcattgtcaggcttcat
gaaaatgagatgagatttgaacctccgctgtctccgtttaagttccaacaactacttaac
aacctgacaactctcagaatcagcaacgctggaggacagaactacacatctcagctcgca
ggggtaaccctgacctcagccttcttgtccgctggtccagccaatcctccggctccatgg
gtggaatcttgttcctgtcccccgggctttgcaggccagttttgtgagcggtgcacccca
ggattcacctgggaagaccccagcagagggtctctctcaagatgtgtaccatgcaactgc
caccagcatggaacctgtcatccagagacaggtgtgtgtgagtgctcagacttcaccact
gggatgacctgtgagcactgcctggatggttactatggcaatgctttgattggcacccgt
ggtgattgtcagccttgcccttgcccggaccgtaccagctgtacagaaattgcggagact
ggacaggtggtctgtaccaactgccctacacgacagacggggattcgctgtcagatgtgt
gaagatggttactatggtgaccccttgggacattctggggcagctcaaccgtgtgtgaga
tgcaactgcaatggcaacgtggacttcaacgctttgggaatatgtgaccacatcaccggg
cgatgtttgaaatgcttgagacacacagagggcgagcactgccaacgctgccagcaaggt
ttctatggcgatgccctgaaccagacagcaggccagaagtgcaagccgtgcagctgcaat
cctgggggaacctctggacacgtgaatgaatgccaccctcaaacaggaaattgtcagtgc
cttgctcaagttaccggacgggattgcagttattgtgaagtaggcttcttcaacctccaa
ccaggtgcaggatgtgagaggtgcaagtgtaatccgattggctcatcgtccatcgcatgt
caaccaatcacagggcagtgtgtgtgtcgtgcaggagtgaaaggaagactgtgtgattct
tgccgcgtgggcttctttggattctcgtcacaaggttgcagagcctgtaactgtgaccca
atgggctccatttccatgcagtgtcacagtaacggtacctgccactgtcgccagggcttt
gtgggttataagtgtgacaaatgtgagttgaactatttccacaacacagccacacatcag
tgcgaggagtgcccagtctgctatggtcttttaaaaaaacaggcagaaaagctgaggact
cgcctgcagaatttggagaagctgctggctccctttgattgccgcggtagatttggggag
cagcaccacctgctgaagtatcacatggccaggctttatgagcatgagcaccagagggag
gatattttaccgaatgctctggaggattttctggccttccaagaagcacgggaggccttc
ataaaacaattttccttgctggaagcttccacaggcacactcttagcccagctgcacggc
attacatctgctttgaactgcagcatcagcatgacgggggaagaggggaaggataggagg
aaggatgaagggagtaggggtgtgtgtcaaacctttacagagactaggttcatggtcaga
gtgtctcagaaacagctaaagcaggcaacagtggacctggacaacatgatcattcctttt
gaggtggtgtcaggacccaacaaatggaacatgatggtcaatgactcacagtccctaatg
aaaagtcacaaagaaacagcagagcacattgaggccatagccagcagggcggtaagcgcc
tcggagcagaccttggctttcctgatggatctactgcaggacaactcaacagaggagtac
atcatgaacctaacagagcaaataacacaaatgcagcagcagaaggagaacctgacagcg
caggtgaatgaaactgtagccaaacagctggtcctgaagggggaagctgctgctttaaag
cttgccctgggtaatatcacatcatccttacatcagctggctctgacagatgccagccca
tcaacagagcctgaccaaacacagctcaacctaacatatccaaccaaccatacaacaaag
tggggcgaggacctgctaaaacagacagaagagttggaccggcaaattcagaccaaagac
catctcatcagtaagatcagagaggaaatggagcctctaaaactgactgccaacaagaaa
ctggagattgtggatgacatcagtgagctgcatgctcacgcccaaggggcaaaggtcatg
gctttgtcgtccgtggtgacagggaaagaagtggaatctgacgccatcgccctgcacagg
gaactagaatacatggtgagggagtggccccgtcagcaggcccagaccaaggctgcaata
aagaaggaaagacccttggaggaaaaggttctcgctgatgtcaggaaaagggtctcacag
attgcaaagatgctaataccagctctggaaaactccagcctctccagcaacaccacgaag
gaggcagaacaaacagcacatgctgtggcaaaggaatccaaagccattctgacccaagcc
aagcataccaggactgcatctgctcaccttagctcccatatagactctgctttacaacag
ctggctgagcaggagatgcaaacggacgcagccaactcccagatcacttccgagcctgcg
gttaccctgaccagtgttaaggaagacatggaagcagccaagcttcagttgaaggcctat
tctgttacactaactgagctaatcagcaagattgatggtaacatgcagctggagcggttt
gaccgaatcttaaacgagacagcgcgtcgccttagcatgctccgcgggagcgttgagagt
ccggcgctgggcatgaagatccagaagctgcatttggccgctaaggaacagcaaagccgg
atgtccatcattgaacaggacttagaggagatcatagaggagagagacagtctcagggac
atagctttaaacctgcctcagtcctgtccccaggccacaggagcaggtaaggtctag
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integrated database retrieval system
