Etheostoma cragini (Arkansas darter): 117959848
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Entry
117959848 CDS
T07493
Symbol
kcnt1
Name
(RefSeq) potassium channel subfamily T member 2 isoform X1
KO
K04946
potassium channel subfamily T member 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117959848 (kcnt1)
Ion channels [BR:
ecra04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
117959848 (kcnt1)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
BK_channel_a
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
117959848
NCBI-ProteinID:
XP_034753101
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Position
16:complement(18433034..18462083)
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AA seq
1269 aa
AA seq
DB search
MQLTQEEDFVKGDSTPTTAALQSDGSAGSPVKMCSECYVNQTFVHDDGTANNHKQRSSPA
PLQTNINSSGVILDISTLTMEQQESEEVLPLPPRFRFRDLLLGDQSFQNDDRVQVEFYVN
ENTFKERLKLFFIKNQRSSLRIRVFNFSLKLLTCLLYTIRVVTDNPGQGASASPSAGQQN
APSGNNKCVDCQWNGSVQDREINWDLIFWVDRKIPVWAIQVIVAIISFLETMLLMYLSYK
GNIWEQIFQVSFLLEMINTVPFIITIFWPSIRNIFIPVFLNCWLAKCALENMINDVHRAI
QRTNSAMFNQVLILICTLLCLVFTGTCGIQHLERAGKNLSLFNSFYFCIVTFSTVGFGDV
TPRIWPSQLLVVIMICVALVVLPLQFEELMYLWMERQKSGGNYSRHRAQTEKHVVLCVST
LKIDLLMDFLNELYAHPRLQDYYVVILCPSEMDLQVRRVLQIPLWSQRVIYLQGSVLKDQ
DLLRAKMDDAEACFILSSRNEMDRMAADHQTILRAWAVKDFAPNCPLYVQILKPENKFHV
KFADHVVCEEEFKYAMLALNCVCPATSTLVTLLVHTSRGREGQQSPEHWQRMYGCCSGNE
VYHIRVCDSKFFGEYNGKSFTYASFHAHKKYGVCLIGIKREDNKSILLNPGPRHIMAATD
TCYYINITKEENSAFIFNQEEKKGRPAGGRYDGPSQLPVHSIIASMGTVAMDLQNTSPPD
VSGGRLVPPALNGTEGRRPSIAPVQEIADSASILPCDLLSDQSEDDSVFTDEKGHSSTEY
VKGYPPNSPYIGSSPTLCHLLAEKAPFCCLRLDQGCRHNSFEDAKAYGFKNKLIIVSAET
AGNGLYNFIVPLRAYYRPRKELNPIVLLLDNSPENHFLEAICFFPMVYYMAGTIDNLDSL
LQCGIIYADNLVVVDKESTMSAEEDYMADAKTIVNVQTMFRLFPSLSIITELTHPSNMRF
MQFRAKDCYSLALSKLEKKERDKGSNLAFMFRLPFAAGRVFSISMLDTLLYQSFVKDYMI
LIARLLLGLDTTPGSGYLCAMKVKEEDLWISTYGRLFQKLCSSSAEIPIGIYRTESPIFS
TSESQVSVSVDDCEDTKDKGDESRSNDQSDHPLLRKKSMQWARRLSKKSMKRQGVSRDSS
KDHAQRIAQQRLNFYRRSEREELSELVRNRMKHLGLPTSGYEDLTNLTASDVMNRVNLGY
LQDEQNDHQNTLSYVLINPSPDTRLELNDIVYLIRSDPLAHVPEVPPVHRSSLRETHESS
IDAREDTQL
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgcaattaacccaggaagaagactttgtcaagggggactcaacgccgaccacagcagct
ctccagtccgacggcagcgccggatcaccggtcaagatgtgcagtgaatgttacgtgaat
cagacatttgtgcacgatgatgggaccgcgaacaatcacaagcaacgctcttctccagca
ccactccagaccaacatcaacagcagtggggttatcttagacatctccactcttactatg
gagcagcaggagagtgaggaggtgcttccgctgcctccccgcttccgcttcagagaccta
ctgctcggggaccagagcttccagaatgatgacagagtgcaggtggagttttatgtgaat
gaaaacaccttcaaggaacgtctgaagcttttcttcatcaaaaaccaaagatcaagcctt
cggattcgtgtgtttaacttctccctgaagctgctcacctgcctgctttataccatccga
gtggtgaccgataacccgggtcaaggcgccagtgccagtcccagcgcaggacagcagaac
gctcccagtggcaacaacaagtgtgtcgactgccagtggaacggatccgtgcaggacagg
gaaattaactgggatttgatcttctgggtggatagaaagattcctgtctgggccattcaa
gtgattgtggccatcattagtttcctggagactatgttactaatgtatctgagctacaag
gggaacatctgggagcagatattccaagtgtcctttctcctagagatgatcaacaccgtt
cccttcatcattacgatcttctggccctcaatcagaaacatcttcattcccgtgtttctc
aactgctggctggccaagtgtgctttggagaacatgatcaatgatgtccacagagcaatc
cagaggaccaactcagccatgttcaaccaggtcctaattctcatctgcaccctgctctgc
ctggtcttcactggcacatgtggaatccagcacctggagcgagcaggcaaaaatctctcc
ctcttcaattccttctacttctgcattgtcaccttctccaccgtgggctttggagacgtc
accccccgcatatggccctcgcagctactggtggtcatcatgatctgtgtggctctggtg
gtgctgcctctgcagtttgaggagctgatgtacctgtggatggagagacagaagtctgga
gggaattacagccgccacagagcacagacggagaaacacgtagtgctgtgtgtcagcaca
ctaaagatagacctgctcatggattttctcaatgaattatatgcccatcctagactgcag
gattactacgtagtgatcctgtgcccaagtgaaatggacctccaggtacggagagtgctt
cagatccctctgtggtctcaaagggtcatctatctgcaaggatctgttctcaaagaccaa
gacctgctgagagctaaaatggatgacgcagaggcttgtttcattctaagcagtcgtaac
gaaatggatcgcatggctgcggaccatcaaaccatcttgagagcctgggcagtgaaggac
tttgctccaaattgccccctttatgtccaaatacttaaacctgaaaataagttccatgta
aaatttgcagatcatgttgtttgtgaggaggagttcaaatatgccatgttggctctcaac
tgtgtgtgtcctgccacctccaccttggtcacgctccttgtacacacctcccgcggacga
gaaggacaacagtctcccgagcactggcagaggatgtacggatgttgctctggcaacgag
gtctaccacatccgagtgtgtgacagcaagttctttggagagtataacggcaaaagcttt
acatacgcctcctttcatgctcacaagaagtacggcgtgtgtctaattggtataaagagg
gaagacaacaagagcatcctactgaaccctggcccgcgccacatcatggctgccacagac
acgtgctactacatcaacatcactaaggaggagaactcagccttcatcttcaaccaggag
gagaagaagggccgccctgccggaggacgctatgatggaccctcgcagcttcctgtacac
agcatcattgctagcatgggcactgttgccatggatcttcagaatacgagtccacctgac
gtctcgggtggtagactggtcccacctgcattaaatggaacagagggccgcaggccgagc
atcgctccagttcaggagatcgccgactctgcctcaattctgccatgtgacctcctcagt
gaccaatcagaagatgactctgtcttcacagatgaaaagggccactcatctaccgagtac
gtgaaaggttatccccctaactcgccgtacattgggagctcgcctaccttgtgccatctg
ttggctgaaaaagccccgttttgctgcctacgacttgaccagggttgcaggcacaacagc
tttgaggatgctaaggcttatggttttaaaaacaagctcatcattgtgtctgctgaaact
gcagggaacggtctttataacttcatagtgcctcttagagcttattacagaccgaggaag
gaactcaaccccattgtcttgctgcttgataactctccagaaaatcactttctggaggcc
atctgcttttttcctatggtctactacatggctgggaccatagacaatctggacagcctg
ctgcagtgtggcattatctacgcagataatttggttgttgtggataaagagagtacgatg
agtgctgaggaggactacatggctgatgccaaaactattgtcaatgtacagacgatgttc
aggttgtttcccagtctcagcattatcacagagcttactcatccatccaacatgaggttc
atgcagttcagagccaaggactgctattcactggccctctccaagctggagaagaaagag
cgtgataaaggttccaacttggccttcatgtttcgcctacccttcgctgcagggagagta
ttcagtatcagcatgctggacaccctgctgtatcagtcttttgtgaaggactacatgatc
cttattgcaaggttgctgctggggctggacaccactccaggatcaggatacctctgtgct
atgaaagtaaaagaggaagatctgtggattagtacttatggtagattgttccagaaactc
tgctcctctagtgctgaaattcctatcgggatctatcggacagaatcccccattttctca
acttctgagtcgcaggtgtcagtcagtgttgatgactgcgaggacaccaaggacaagggg
gacgagtctcgcagcaatgaccaatcagatcaccctctgctgaggaagaagagcatgcag
tgggcacggcgtctgagtaagaaaagcatgaagcggcagggagtgagccgcgactcgagc
aaggaccacgcccagcgcatcgctcagcagcgcctcaacttctaccgacgctctgagaga
gaagagctatctgagctggtccgcaaccgcatgaaacatctgggcctccccacctctgga
tatgaagacctcactaatctgacagccagcgacgtcatgaacagagttaatctgggatac
ctacaagatgagcagaatgatcaccaaaacaccttgtcctacgtcctgattaacccttct
cctgacaccaggctggagctcaatgacattgtgtacttgattcgttcagaccctctggct
catgtcccagaggtgcctcctgtccacagaagcagcctgagagagacacacgagtccagc
atagacgccagagaggacacccagctctga
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