Etheostoma cragini (Arkansas darter): 117959895
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Entry
117959895 CDS
T07493
Symbol
erbin
Name
(RefSeq) erbin isoform X1
KO
K12796
erbb2-interacting protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117959895 (erbin)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
PDZ
LRR_LRWD1
LRR_5
LRR_NXF1-5
PDZ_2
PDZ_6
LRR_9
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
117959895
NCBI-ProteinID:
XP_034753176
LinkDB
All DBs
Position
16:21153295..21202434
Genome browser
AA seq
1409 aa
AA seq
DB search
MSKRSLFVRLVPCRCLRGEEEAVTSLDYSHCSLETVPKEIFSFEKTLQELYLDANQIEEL
PKQLFNCQLLHRLSMPDNDLTVLPTAIANLINLRELDVSKNSIQEFPENIKNCKVLAIVE
ASVNPISKLPDGFTQLLSLTQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMQ
KLTQLERLDLGSNEFTEVPEVLEQLTGVKELWLDGNRLTFLPGMLGTLKQLVYLDVSKNN
LEMVDEQICGCESLQDLLLSNNALTQLPGSIGSLKKLTALKVDENQLIYLPDSVGGLTSL
DELDCSFNEIEALPSSIGQCVSIRTFAADHNFLTVLPPEMGKWKNATVLFLHSNKLESLP
EEMGDMQKLKVINLSNNKLRSLPYSFTKLNQMTAMWLSENQSKPLIPLQKEEDPETHKIM
LTNYMFPQQTRTEDYIPNSDSESFNPTLWEEQRKHRAQVAFECDEDKDERETPPREGNLK
RYPTPYPDELKNMVKTAQSVAHRLKEDESSDESGKDAKPNERNHIGVQDVGVKVIEPPYP
NGTASDMDSQVSTDTFSHNPSATETKDTSDSYSSQTVPVKSSGGSMMNHEDTLEDSEELS
DEEEMKMAEMRPPLIEISINQPKVVTLSKDKKDDADSLLDETVANSNQNNSNCSSPSRMS
DSVSLTTDSSQDNSLCTPEREAKMPFLPKSRREDENMNPPKDTLPLLHNGNGSETSLPAL
LKTQQTPPEKMGDYDLSMEARLAFIEKGFNNGMGETYTKWDQINMNVSKLPTDNMVQLDE
GNTTKNGSVTQEDLDSKQGFSNDNMEHFLNGNQQVSDCINSLGNKTQATRVETSAVHVAS
TGVTASSDMSLSRSTEELSPDKRCHPPQVVKSQSISNIETGGLKLYSFDGDDDSFDSTGM
RIAGAGPGAQGQSIVRSKSASQLLNDQTLQIYPGSSASSSDLLSSSKPPSTSRYAVSSSM
AMGIPPPQYNIQYTSSAMPKEGLWSQRTPIPPEHQGYLPPPPHSLANTNYSNRNQAPPYP
LQPQQRGPPMAPKSPGDMWTKERLHSTGGQARSSTLQRQSSTTSTASMGDPRRIQVPDGE
YMTYRDIHTLARGPLAMSQAMQRPLSARTYSIDVPGASRSLGARPQPHELPERTMSVSDF
NYQQSSPSKRHNTRVKSEHSLLDGPGQVSGGVGAGRVPVDWRDQVMRHIEAKKMEKNALS
RSYNSNNAPLSWSHYGSCRDMHASQGSLVFSARVGQPYGALGFCDDVFPQGQQSYTMDPH
RKVPLMNGQMGPSVRAQVSQAPMARHPSREQLIDYLMLKVSHPPQGPPRIPQDTQQQEIR
LKVEKNPELGFSISGGVGGRGNPFRPDDNGIFVTRVQPDGPASMILQPGDKIIQANGYSF
VNIDHGYAVSLLKTFLNTVDLTIIREAQA
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggagcttgtttgttcgcctggtgccgtgccgctgcttgcggggtgaggag
gaggcagtaacatcgctggactactcccactgcagcctggagactgttcctaaggagatc
tttagctttgagaagaccctgcaggaactttatctcgatgccaaccagatcgaggagctg
cctaaacaactgtttaactgccagttactccaccgactgagcatgccagataatgaccta
acagtgttgccaacagcgatcgcaaacctcatcaatctcagggagctcgatgtcagcaaa
aacagtatccaggagtttccggaaaacatcaagaattgcaaagtcctagctattgtagaa
gccagtgtgaatcccatatccaagctcccggatggttttacccagctcctaagtctgacg
cagctctacctgaatgatgccttcctggagttcttaccagccagcttcggcaggttaact
aaactacagatcttggagctgagggaaaaccagttaaagatgttgccaaaaagcatgcag
aagctcacacagttggagaggttggacctggggagtaatgagttcactgaagtgcctgag
gtgttggagcagctgactggagtcaaggagctatggctagatgggaacagactgacgttt
ttacctgggatgcttgggacgctaaaacagctggtatacctggatgtgtccaaaaacaat
ctggagatggtagatgagcaaatctgtggctgtgagagtctgcaggaccttctgctctcc
aacaatgccctcacacagctgccaggctccatcggctcactaaagaaacttactgcactg
aaagtggatgagaaccagttgatatatttgccagactcagttggaggactgacatctctg
gatgagctggactgtagttttaatgagattgaagccttgccctcttccattggtcagtgt
gtcagcatccgcacctttgctgcagatcacaacttccttaccgtgctcccccccgagatg
ggcaaatggaagaacgcaactgtgctgttcctacattccaacaaactggagtctttgcct
gaggaaatgggtgacatgcagaaacttaaggttatcaatcttagcaacaacaagttaagg
agtctgccctatagtttcactaaactgaaccagatgactgcaatgtggctgtctgaaaat
cagtcaaagcccctgatacctctccagaaggaggaggatccagagacacacaaaattatg
ctgaccaactacatgtttccccagcaaaccaggactgaggactacattcccaattctgac
tctgagagctttaatcccactctctgggaggagcagcgcaagcatcgagctcaggtggcc
tttgagtgtgacgaggacaaggacgagagagaaacacccccaagggaaggaaacctgaag
cgctaccctacaccatacccagacgagttgaagaacatggtgaagacagcccagtctgtg
gctcacaggttgaaggaggacgagtcaagtgacgagtcggggaaagatgcaaaaccaaat
gagaggaaccacattggagtgcaggacgtgggagttaaggtgattgagcctccctatcct
aatggtacagcatcagacatggactcccaagtatctaccgacacattttcccataaccca
tctgcaacagaaacaaaagacacttcagactcttacagctctcagacagtaccagtcaaa
tcatcagggggctcaatgatgaaccatgaagacaccctggaggattctgaggagctgtct
gacgaagaggagatgaaaatggcagagatgagaccccctcttattgagatctctatcaac
cagcctaaagtggtgactttaagtaaggacaaaaaagatgatgccgactcattgctggat
gaaacagttgccaacagcaaccaaaacaacagtaactgttcgtcgccatcacgcatgtct
gactcagtatctctgactacagacagcagtcaggacaattctctgtgcacccctgagagg
gaagcaaagatgcccttcctaccaaaaagccggcgagaggatgagaatatgaacccgcct
aaggataccctccctctcctccataatggaaatggctctgaaacatcccttccggccctt
ttgaaaacccagcagactccgccagagaaaatgggtgactacgacctgtccatggaagcc
agactggccttcattgagaagggatttaacaatggcatgggcgaaacctacaccaagtgg
gaccagatcaatatgaacgtgtccaagttgccaaccgacaacatggttcagctggatgag
gggaacacaaccaagaatggttcagtaacccaggaggacttggacagcaagcagggtttt
agcaatgacaacatggagcattttctgaatggaaaccagcaggtcagtgactgcatcaat
agtcttgggaacaaaacccaagcaacgagagtagagacatctgctgtgcatgtggcctcg
acaggcgtaacagccagcagtgacatgtctctgtctcgcagcacagaggaactgtctcca
gacaaaaggtgccatcccccacaggtggtgaagtctcaaagtatcagcaacatagaaaca
ggaggcttgaagctgtactcttttgatggggatgatgactcctttgactcaacaggaatg
aggattgcaggagccgggccaggagctcagggccaaagcatagtccggagcaagtcagcc
agtcagttactcaatgaccagactctccagatctaccctggctcctctgcatcttcttca
gacctgctctcctcctctaaaccacctagcaccagcaggtatgcagtctcctccagcatg
gccatgggcatccctcctcctcagtataacatacagtacacgagcagtgccatgcctaaa
gagggcctctggtcccagaggacgcccattccccccgagcaccaaggttaccttcctcct
cctccacactcacttgccaacacaaactactccaaccgtaatcaagcacctccttaccct
ctacaaccccagcagcgggggcctcccatggctcctaaatcccctggggacatgtggact
aaggagagacttcattcgacgggaggccaggctagaagcagcactctgcagaggcaaagc
agtaccacctccacagcctccatgggtgacccgaggcgtatacaggtgcctgacggggaa
tacatgacatacagggacattcacaccctcgccagggggccgctggcaatgagccaggcc
atgcagaggcccctctcagctcgcacttacagcattgatgtacccggcgcatccaggtct
ctcggagctaggccgcagccacatgagcttccagagaggaccatgtctgtcagcgatttc
aactaccagcaaagcagccccagcaaaaggcacaacaccagggtgaagtctgagcactcg
ctgctggatgggcctgggcaggtgtcaggaggagttggagcaggaagggtgccagttgac
tggagagaccaagtgatgcggcacattgaggccaagaaaatggaaaagaatgcgctgtct
cgctcctataattccaataacgctccgctgagctggtctcactacggcagctgtagggat
atgcatgccagccaaggttccctggtctttagtgccagggtcggacagccctacggagct
ctgggcttctgtgatgatgtgtttccccaagggcagcagagctacaccatggacccccac
agaaaagtgcctttgatgaacggtcagatgggcccttctgttcgtgctcaggtgagccag
gcgcccatggcccgacacccttccagagagcagctcattgattacctgatgctcaaagtc
tcccatccaccccaggggcccccacgcatcccgcaagacacacagcagcaagagatccgt
ctgaaagtagagaagaatcccgagctgggtttcagtatatcaggaggagtgggaggccgg
ggaaatccctttcgtccagatgacaatggtatatttgtgacaagggttcaacctgacgga
ccggcatccatgattcttcagcctggcgataaaatcattcaggcaaatggctatagcttt
gtgaatatagatcatgggtatgcagtgtccctcctgaagacgtttctgaacactgtggat
ttgactatcatcagagaagcgcaagcatag
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