Etheostoma cragini (Arkansas darter): 117960090
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Entry
117960090 CDS
T07493
Name
(RefSeq) girdin-like isoform X1
KO
K25392
girdin
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ecra03037
]
117960090
Cilium and associated proteins [BR:
ecra03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117960090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
HOOK
KASH_CCD
DUF4472
Motif
Other DBs
NCBI-GeneID:
117960090
NCBI-ProteinID:
XP_034753542
LinkDB
All DBs
Position
17:complement(5548023..5612997)
Genome browser
AA seq
2068 aa
AA seq
DB search
MESEVFTPLLEQFMLTPLVCWVKTVGQATLIDGTQLSEYIELVDGIYLNEIMLEINPKAT
VQRTNKKVNNDATLRIQNLSILIRQIKAYYQETLQQLVMMPLPNVLVLGRNPLSEQGLEE
MKKLLLLLLGCAVQCEKKEEYIECIQTLDFDTKAAIASHIQEVTHNQENVVDMQWLESGE
MPSEDLDSLSRNLAFHLKRLVDERDTQLEIIVELTQERDCVQLSPLAPCPTQSPGDSPSI
RRTESRQHLSVELADAKAKIRRLRQELEEKSEQLLDTKQELENMEVELKKLQQESYQLLS
DARSARAYRDELDALREKAIRVDKLESELSRYKERLHDIEFYKARVEELKEDNQVLLETK
SMLEEQLDARCTRSDKLHLLEKESLQLKSKIHDLEMERDMDRKRMEELLEENLVLEMAQK
QSMDESLHLGWELEQLSKTPDLTEAPQKSLGDEVNELTSSRLLKLEKDNQTLLKTVEELR
GAASQDTVTKLAKVSQENLRLNQKLEQLGSERTADRESLLSAESLSTDLMKEKALLEKTL
ETLRENSERQLKGLEQENKHLSQTVSSLRQRCQVGAEARVKDVEKENRVLHESICETAAK
LNKMEFERKQLRKELEVVKEKGERAEDLEIQIQKLERENDSLQKKVASLGITCEKVCSLE
KENTELEAEGRRLKKKLDTLKNMAFQLEALEKENSQLEQENLELRRSAESLRLAGAKAAQ
LEAENRELESERSQMKRSLELLKASSKKTERLEVSYQGLDTENQRLQKALENSSKKIQQL
EVELQEVETENQTLQRNLEELKISSKRLEQLEQENKTLEQESSQLEKDKKLLEKENKRLR
QQAEIRDSKLDDNNQRISTLEKENRTMGKEMIFFRDSCTRVKDLERENKELVKLGTIDKK
TLNALREELVSEKLRTQQMNNDLEKLTHELEKIGLNKERLLHDESSEDRFRLLETRLEST
LKSSLEIKEEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQREEEERMVQSSPPRG
GDDPQAFSKWEKESHEATRELLKVKDRLIEVERNNATLQAEKAALRSQLKQLETQSSNLQ
AQIVAVQRQTASLQENNTTLQTQNAKLQVENSTLSSKSAALMAQNAQLQSQQSSVEGERE
GALKEKEELRSTYEMLLRDHEKLAALHERQAAEYEALIGKHGGLKSSHKSLEQQHRDLED
KYKQLLQRKGELEDLEKNLKEQQEKMALENHTHQATAGQHKLLKEENERLNNTYRQLVKD
NENLQLDHKNTKTQLNSAKLDQTKLEAEFSKLKEQYQQLDITSTKLTNHCELLSQLKGNL
EEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ
YKFYDPSPPRRRGNWITLKMKKLIKPKSRERMRSLTLTPSRSESGDGFLMFPQDSQDSSS
IGSGSNSLDDTLTQKRSSRRRGQQPHAQGQGSTNAMKRLPFMRNRSKDKDKAKAIYRRSM
SMNDLLQTMAVAGGPGAQWANSIENLDGAEAGDAGMTGSSRRSGQRMKELAFSTNAIDCA
TLTLPTARQSRAKHRLQVKDNASCEDVAGSLDDPKSQASRPTSLHKNRITSSNSNNNSQL
TSPLEGKGMHLLPLTPPPFFPLPTQLTILAFLLCYFIFFFLYLFLSCFHDFKSTLNGSLS
RPHSESSGEFSLSLDQEVWSSSGSSPVQQPTSSRSSHQSPLQLRRSLDPSTAAGLPGQTQ
VRRTGSPTNEVLSLQQFLDEGIDPAESGSQENLTVDSPRLSTSSEHVQKERTSTKGRGIL
RSSSGKAAPVSSDRPPRSAGQPGRPTLRKAESTRVRGSVSVRSSLSSQGKATSVSERLDS
ASSTLPRASSVISTAEGTNRRTSIHDLLSKDSRQPVSVDPSPIASTKAGVRSQPTPSEYH
PNSTNLKGPLTTITPLPKSFSLPCHSLEDPDLTTLESFLGPSFTVESVFMDSIFSESAGK
NLPFLSLNPTLVSNISGPPAPLKTHPPPIPNHVSTQNQAPNSLSNGQTGSAPATSECSEG
LDPSCVNNPDQSLGPEDNQSLWYEYGCV
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgaggttttcacccctttgctggagcagtttatgctcacgcctctggtctgc
tgggtgaagacagtcgggcaggcgactttgatcgatggcactcaattatcggaatatatt
gaattagtggacgggatttacctgaacgagataatgcttgagataaatcctaaggccacg
gtgcagaggaccaacaagaaggtgaacaatgacgcaacactgcgcatccagaacctttct
attctcatcaggcagattaaagcctactatcaggagacgctccagcagctggtgatgatg
cctttaccaaacgtgctggtactgggccggaaccctttgtctgagcaaggtctggaggag
atgaaaaaactgttgctgctgctgctaggctgtgctgtccagtgcgagaagaaggaagag
tacattgagtgtattcagactctggactttgacaccaaagctgccatagcatcccacatc
caagaggtgactcataatcaggagaacgtagtggacatgcagtggttggaaagtggagaa
atgccttctgaggacctggacagcctctccagaaatctggcttttcacctcaaacgcctg
gtggatgagagggacacccagctggagattatagtggagttaacccaggaaagagactgt
gtacagctgtctccactggctccctgtccgacccagtcccccggggactcccccagtatc
aggaggaccgaaagccgacagcacctctcagtggagttggctgatgccaaggccaagatc
agacgccttcgacaggaactagaggagaagagtgagcagcttttagacaccaagcaggag
cttgagaacatggaagtggagctcaagaagcttcagcaagagagctaccagttactgtcg
gacgctcggtcggctcgggcctatcgtgatgagctggacgcactcagagagaaagcaatc
cgtgttgacaaactggagagcgagctgagccgatacaaggagagacttcacgacattgag
ttttacaaggccagagtcgaggagctgaaggaagacaaccaggtcctgttggagactaag
agcatgttggaggagcagctggatgctcgctgtacccgctccgacaaactgcacctcctg
gagaaagagagtctgcaactcaaatccaagatccacgacctggagatggagcgggacatg
gaccgtaagcgtatggaggagctgttggaggagaaccttgtgcttgagatggcccagaaa
cagagcatggacgagtccctgcacctgggctgggagctggagcaactatccaagacacca
gatctgactgaagcccctcagaagtctctgggcgacgaggtgaatgagctgacctcgagc
cgcctgttgaagctggagaaagacaaccagaccctgctgaagactgtggaggagctcaga
ggagcagccagtcaggacacagtgacaaagctggcaaaagtcagccaagaaaacctgaga
ctgaaccagaaattggagcagctggggagtgaacggacagcagacagagagtcgctcctt
agtgctgaatctctcagtactgacctgatgaaggagaaggctttactggagaagactctg
gaaacactcagagaaaactctgagagacagctaaagggcctggagcaggagaacaagcac
cttagccagacggtgtcgtccctgcgtcagcgttgccaggttggtgccgaggcccgggtc
aaggatgtggaaaaagagaatcgcgttctccacgagtccatctgcgagacagctgccaaa
ctcaacaagatggagtttgaaaggaaacaactacgtaaggagcttgaagtggtgaaggag
aaaggtgagagagcagaagatttggagattcagattcagaagctagaaagggaaaatgac
agcctgcagaagaaagttgccagccttggaatcacctgtgaaaaggtgtgttctttggag
aaggagaacactgagctagaggcagagggccgccgtctgaagaagaagttggacactctg
aagaacatggccttccagctggaggctctggaaaaggagaactcacagctggagcaggag
aacctggagcttcggcgctcagcagagagtctccggttagcgggagctaaggccgctcag
ctagaagctgagaacagggagctggagagcgagagaagccagatgaagcgaagcctggaa
ctgctcaaggcctcgtccaaaaagacggagcgattagaggtgagttaccagggcctagat
acagagaaccagcgcctgcagaaggctttagagaacagcagcaagaagattcaacaattg
gaagtagagctgcaagaggtggagactgagaaccaaaccctccaacgcaacctggaggag
ctcaagatctccagtaaacgcctggagcagctggagcaggagaacaagactctggagcag
gaaagctcccagctagagaaagacaagaagctactggagaaagagaacaagcggctgaga
cagcaggccgagatccgcgactccaagctagatgacaacaaccagcggatctccaccttg
gagaaagagaatcgcaccatgggcaaggagatgatcttcttcagggactcatgcacgaga
gtcaaagacctggagcgagagaacaaggagctggtcaaactgggaaccattgataagaag
acccttaatgcactcagagaggagcttgtgagtgagaagctgcggactcagcagatgaat
aatgatctggagaaactgacccatgagttggaaaagattggactgaacaaggaaaggctg
ctgcatgacgagagctctgaagacaggtttaggctcctggaaaccagattggagtcgact
ctgaaatcatctttggagattaaagaggagaagatcgccgccctagaggccagactgcag
gagtcctccaacctcaaccagcaacttcggcaggagctcaagacagtgaagaaaaattat
gaagcgctgcgtcaaagggaggaggaagagaggatggtgcaaagctcgccccctagagga
ggggatgaccctcaggctttcagtaaatgggaaaaagagagtcatgaagccaccagagaa
ctgctgaaagtcaaagacagactcattgaggtggagaggaataatgccacactccaggct
gagaaggcggccctgaggagccaacttaaacaactggaaactcaaagctccaatttgcag
gctcagatagtggcagtgcagagacagactgcttctttacaggaaaacaatacaacacta
caaacacagaacgccaagctgcaggtggagaactccaccctgagctcaaagagtgcagcc
ctaatggcccagaacgcccagctgcagagccagcagagcagcgtggagggtgagcgtgag
ggtgctctgaaggagaaagaggagctccggtccacctacgagatgctcctccgcgatcac
gagaagctggcagcgctccacgagaggcaggccgccgagtatgaagccctgatcggaaag
cacgggggcctgaagagctcccataagagcctggagcagcagcacagagacctggaggac
aagtacaagcagctcctgcagaggaagggggagcttgaggatctggaaaagaatctgaag
gagcagcaggaaaaaatggcgctggaaaatcatacgcaccaagccacagctggacagcac
aaactgctcaaagaggaaaatgaaaggctgaataatacctatcgtcagctggtgaaggac
aacgagaatctccaactggaccataaaaacacaaagacccagctgaacagcgccaagctg
gaccagaccaagctagaggccgaattctctaaactgaaggagcaataccagcagctggac
atcacctccaccaagctcaccaaccactgtgagttgttgagccagctgaaaggaaacctg
gaagaggagaaccgccacttgttggaccagatccagactctgatgcttcagaatcgcact
ctgctggagcagaccatggagagcaaggacctgttccacgtagagcaaagacaatacatt
gacaagctgaatgagctgaggagacagaaagagaagctggaggagaagattatggaccag
tacaagttctacgacccttcacctccacgcaggcgtggcaactggattactttgaagatg
aagaagttgatcaagccaaagagccgcgagagaatgcgctctctcacactgactccctct
cgttcagagtctggcgacggtttcctgatgttcccccaggacagccaggacagctcgtcc
ataggctctggctccaactcgctggacgacactctcacacaaaagaggagcagcaggagg
agagggcagcagccccatgcccaagggcagggttccaccaatgctatgaaaagattgcct
ttcatgaggaacagatccaaggacaaagacaaggccaaggccatctaccggcgctccatg
tccatgaatgacctgctgcagaccatggcggtggcgggcggtcccggggctcagtgggcg
aacagtatcgagaacctagacggcgctgaggccggagatgctggcatgacgggtagcagc
aggcgcagtgggcagcgcatgaaggagctcgccttttccaccaacgccatcgactgtgcc
accctcaccctgcctactgcaaggcaaagcagggccaagcaccgtcttcaggtcaaagat
aatgcctcctgtgaggatgttgctggctccttagacgaccccaagagtcaagcctccaga
cccaccagtctccataaaaacaggatcaccagtagtaatagtaacaataactcccaactc
acttctcctcttgagggcaaaggtatgcacctccttcccttaacccctcccccctttttt
ccacttccaactcaactaaccattcttgccttcctcctttgctactttatctttttcttt
ctttatctttttctttcatgctttcatgattttaaaagcacgttgaatggcagcctcagc
aggccacacagtgagagcagtggagagttcagcctgagtttggaccaggaggtgtggtcc
agcagcggtagcagcccagtccagcagcccacctcctcgcgctcctcccaccagagcccc
ctgcagctgcgcaggtcactcgacccgtccaccgccgcaggcctccccggccagacccag
gtcaggaggacgggatccccaaccaatgaggtgctttccctgcagcagttcctggatgag
ggtattgatcctgcagagtccggcagtcaggagaacctcactgtagactctcctcgcctc
tccacttcttctgagcatgtgcagaaagaacgcacttccacaaagggccgaggcatatta
cgctcatccagtgggaaagcagcgccggtcagctctgatcgtccaccgagatcggccgga
caaccgggtcgcccaaccctgcgtaaggcagaaagcacccgtgtgaggggctctgtctca
gtccgctccagcctatcatcgcagggcaaagccacgtctgtgtcggaacgcttggactct
gcttcctccacgctgccccgggccagcagcgtcatctccactgctgagggcaccaatcgg
cgcaccagcatccacgacctactctcaaaggacagccggcagcccgtgtcagtcgaccct
tctcccatcgcctccaccaaggctggggtacgctcccagcctacgcccagtgagtaccac
cccaacagcaccaatcttaagggaccccttaccaccatcacccccctgcctaagtcattc
agcttaccttgccatagcttggaggatccagacctcactaccctcgagtctttccttggc
ccttccttcacagtagagtctgtgttcatggactccatctttagtgagtcggcaggcaaa
aacctccccttcctgtctctaaaccccaccctagtcagcaacatcagtgggccgcctgct
cctcttaaaacacaccctcctcctatcccaaaccatgtttccacccaaaaccaggcccct
aacagcctatcaaatggccagacgggatccgccccagccacatctgaatgtagcgagggc
ttagatcccagttgtgtgaataatccggaccagtcactgggcccagaggacaaccagtct
ctgtggtatgagtacgggtgtgtgtga
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integrated database retrieval system
