Etheostoma cragini (Arkansas darter): 117960096
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Entry
117960096 CDS
T07493
Symbol
nid1a
Name
(RefSeq) nidogen-1
KO
K06826
nidogen (entactin)
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117960096 (nid1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
117960096 (nid1a)
Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
EGF-like domain-containing proteins
cEGF domain-containing proteins
117960096 (nid1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2F
NIDO
EGF_3
Ldl_recept_b
Thyroglobulin_1
cEGF
EGF_CA
FXa_inhibition
EGF
SGL
hEGF
EGF_MSP1_1
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
117960096
NCBI-ProteinID:
XP_034753556
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All DBs
Position
17:complement(16864547..16879972)
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AA seq
1215 aa
AA seq
DB search
MGWHEQGWLLYASFLGFVVSVQSITRGELFHYGPSVRDRLLEAGNDQTHRLELDKPVLFY
DGSFDSIFINTNGFVATAQPTSESTYLGNLPPKFGIIAALLGDLDTSDGVGKVFYRQDSS
PEVLTQAAHHIHRAFPDDDEVNPTHAVVITWVNVATHDEPQSRGDGIEKKRNTFQLVIAS
LETASYAILLYPRDGIQFSSTPVQGSNEVMHAGFSKGLVRSFLFNRQGPYYRTTTDDEAS
VRALTEETNSGLRGVWVYETGTSPYFTNVAPGEVTDLPTEATPQGPPEDYEEATNARRPV
YPDGQQVQYLPYEPEGEQIEVQPIQYQPHQPDNPEVLVVDDTEINVDVFSYNLGTCASNR
NKCSQFSDCRDYSSGFCCHCRPGFYGNGIQCVADGKPQRMNGKVHGKVYVGNSPSPVEFT
GYDLHSYVVVNDGRSYVAISDIPSNIGPSLQPLSALGGVIGWAFALEQPGFKNGFSIIGG
EFTRQAEVTFLPGNEKLTIRQEFKGIDEHDHLVVSTTLEGRVPEVPPGSTVQIDPYSEIY
QYSNNLITSSSSRDYVVSPPNGPTDTRTFQWRQTITFQSCQHGESLRDMKPTQMLSVDQV
FVMYDANNNLIRFAMSNKIGDINGGQPEENPCFTGRHGCDTNAVCRPGQETQFTCQCAAG
FNGDGRTCYDIDECGDNPRICGSHAICNNQPGTFRCECEDGYQFGNDGQTCVEVHRPVDS
CEEGTHNCDIPERAQCSYSGGSSYICSCLPGFIGDGRTCQDIDECQPGRCHQDADCYNTQ
GSFTCQCRPGYYGDGFYCSQERTKTQCENHRESLQGSSEFGPRGPRPPVGQYIPTCDENG
AYEPMQCHGSTGHCWCVDRNGQEIPGTRSRPGSRPMCIDSGVVPPPVGPTTRPDVHPLPP
GTHLLFAQNGRIDHVPLEGYVMKKGDAKAVLHLPEKVIIGVAYDCVEKMVYWTEITSPSI
SKASIQGGEPIAVIRSDVDSPEGIAIDHLGRTIFWTDSMKDRIEVASLDGSQRRVIIDSD
LVNPRAIITDPPNGNLYWADWNRDAPKIETSHMDGSNRRVLVKDDLGLPNGLTYDSHSSL
LCWADAGTHKMECTHPGHGDRRKIMEGLQYPFGITSFGKNIYYTDWRRDAVITVDRHAGK
ELDEFQPQKRTKIYGIATAYAQCPSGQNYCAVNNGGCTHLCLATPTGRSCKCPKNAAGVG
CVERDSGYQEEAAVL
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgggttggcatgagcagggatggctcctatatgcgagttttcttggatttgtggtgtcg
gtgcagagcataacgcggggagaactttttcattacggaccaagcgtaagggaccggtta
ctggaagcagggaatgaccagacgcaccgacttgaactggacaagccagttttgttttat
gatgggtctttcgacagcatctttatcaacaccaatggttttgttgccacagcacagcca
acaagcgagtcgacatatcttggcaatttgcccccaaaattcggcattattgcagctctg
ctaggagacctggacacaagtgatggtgtggggaaggttttctaccgtcaagactccagt
cctgaggttctaactcaagcagcccatcacatacacagggccttccccgacgacgacgaa
gtcaatccaacccatgctgtggtgatcacctgggttaatgtcgccacccatgatgaacct
caaagcagaggagatggcattgaaaagaagagaaacaccttccagctggttattgcatcc
ttggagacggcatcgtacgccattctcctgtacccaagggacgggattcagttttcctcc
acgcctgtacaaggcagtaatgaggtcatgcacgctggcttcagtaaaggtttggtgcgg
agtttcctgtttaacagacagggaccttactaccgcaccaccactgatgacgaggcatcc
gtcagggctttaacagaagagaccaactctggcctgcggggtgtatgggtgtacgagact
ggaacttctccctattttaccaacgtggctccaggtgaggtcactgacctgcccacagaa
gccacaccacaggggccccctgaggactatgaagaagccactaatgcaaggaggcctgtg
tatcctgatggacagcaagtgcagtaccttccttacgagccagaaggggagcagatcgaa
gtccaaccaattcagtaccagcctcatcagcctgacaacccagaagtcttggtggtggat
gacaccgaaataaatgtagatgtgttctcatacaaccttgggacatgtgcgagcaataga
aataagtgctcccagttttctgactgcagggactactccagtggattctgctgccactgc
agaccaggcttctatggcaatgggattcagtgtgtggctgatggaaagccacagaggatg
aatggtaaagtgcatggaaaagtgtatgttggcaactctccttctccagtggagttcacc
ggttacgatctccactcgtacgttgtggtaaatgatggccgttcctatgtggccatcagt
gacatcccttccaacattggaccctccctgcagcccttgtctgcccttggtggtgtgatt
gggtgggcgtttgctctggagcagcctggcttcaagaatggcttcagtattattgggggg
gagttcacacggcaggctgaagtgacctttctgccaggaaatgagaagctgaccatcagg
caggagttcaaaggcatcgatgagcatgaccacctggtggtaagcaccaccctggaaggc
cgggtccctgaagtgcctcctggctccactgtgcagattgacccttactcggagatctac
cagtacagcaacaacttgatcacttcatcatcatctcgggactacgtagtgagcccgccc
aacggccccactgacaccaggacgttccagtggcgccagaccatcaccttccagagctgc
cagcatggcgagtctctgagagacatgaaaccgactcagatgctcagtgtggaccaggtc
tttgtcatgtacgacgctaataataatctcatccggttcgctatgagcaacaagatcggg
gatatcaatggaggacagccagaggagaacccatgtttcactggaagacacggctgtgac
accaacgctgtgtgcagacctggacaggaaactcagttcacctgccagtgcgctgctggc
ttcaacggtgatggccgcacatgttatgacattgatgagtgcggagataatcctaggatc
tgtggctcccacgctatctgcaacaaccagcctgggaccttccgctgtgaatgtgaagat
gggtatcagttcggcaatgatgggcagacctgcgttgaggttcatcgacctgtggactca
tgtgaagaaggcacccataactgtgacattcctgagcgcgctcagtgcagctactccggg
ggctcgtcctacatctgctcctgcctgccagggttcataggagatggcagaacctgccaa
gacatagatgagtgccagccaggcaggtgccatcaggacgctgactgttataacactcag
ggatcatttacctgccagtgcaggccaggttactacggcgacggcttctactgctctcaa
gagaggacaaaaacacaatgtgagaaccacagagagagtctccagggttcgtcggagttt
ggtccgcggggcccccgacctcccgttggacagtacatccctacatgtgacgagaacggg
gcctatgaacccatgcagtgccacggaagcacgggacactgctggtgcgtggaccgtaac
gggcaggagatccccgggactcgctccaggcctggaagcagaccaatgtgtatcgacagt
ggtgttgtgccaccacctgttggacctaccactcgacccgatgtccaccccctgcctcca
ggaacacacctattgtttgcccagaacggcaggatagaccatgtcccgctggaaggttat
gtgatgaagaagggagatgccaaggctgtcctccatctccctgagaaggtaatcatcgga
gtggcgtatgactgtgtggaaaaaatggtctactggactgaaatcacatctccctcaatc
agcaaggccagcatccaggggggagagcccattgcggtcattagatcagatgtggatagt
ccagagggaattgccatcgaccacttgggaagaactatcttctggacggactccatgaag
gatcgcatcgaggtggcctctttggacgggtctcagcgtcgtgtcattatagactctgat
cttgtcaacccccgtgccattatcaccgaccctcccaatggtaatctctactgggccgac
tggaaccgggacgcccctaagatcgagacctctcacatggatggatccaacagaagggtg
ctggttaaagacgatctcggcctgccgaacggcttgacttacgactctcacagctctctg
ctttgttgggcagatgcaggcacacataaaatggagtgcacacatcctggccacggtgac
cgcagaaagattatggagggccttcagtacccttttggaatcacatcgtttgggaagaac
atctactacactgactggcggagagatgccgtgattactgtggaccgccatgctggcaag
gagttagacgagttccagccccagaaacgaaccaagatatatgggatcgccacagcctat
gcccagtgtccatcaggccaaaactactgtgctgtgaacaacgggggctgtactcacctc
tgtttagcaacccctaccggccgctcctgcaaatgtcctaagaacgcagcgggtgtgggc
tgtgtggagagagacagcgggtaccaagaggaggcggctgtactctga
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integrated database retrieval system
