Etheostoma cragini (Arkansas darter): 117960121
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Entry
117960121 CDS
T07493
Symbol
papolg
Name
(RefSeq) poly(A) polymerase gamma isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117960121 (papolg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117960121 (papolg)
Enzymes [BR:
ecra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
117960121 (papolg)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
117960121 (papolg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Nrap_D2
GH97_C
Motif
Other DBs
NCBI-GeneID:
117960121
NCBI-ProteinID:
XP_034753613
LinkDB
All DBs
Position
17:23918087..23938613
Genome browser
AA seq
836 aa
AA seq
DB search
MKEMSSTMPGGQQPQKHYGITSAISLAPPREIDHQYTNKLCDAMKPFGVFEDEEELNHRL
AVLGKLNNFVKEWIAEISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPR
HVERSDFFQSFFEKFKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNL
DLRGDSILRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLG
FLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDP
RVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKAEWSKLF
EPPNFFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFP
GSKENRNENDFVSMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMK
IEATHVKKKQLHQYLPPELVQKKKRSIAELNRSSNGGSSKRISLDSSHLDSSRDTDSGTP
FTSPASKPSKPVSDTEDSVSPPKQIFVDGSPAPSAAAPAPDQGMSIPVIGSKPAVKAKSP
SPPASSSVPTVLSGDVQPNASSSPKEEPNGLEDSVNGAPGAPVKRPHSPTQEDLAKRHKD
SEVVSNDDSAFKEPYPPSCDSHTQGEGPQITALPESKAKPIPTLDTSRTQRLPSMELPDA
SSPLPASNSCRVVKNSIKLALNRHNLTPPKPPVFEASLTPDAPPATEEKGMSIPVIGSKH
VASKHAAPPVGSSIPTLVSRGADPLNGATAKRAHSPTLEEQAKRLKETEKARIHIA
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatgtcaagcaccatgcctggtgggcagcagcctcagaaacactatggcatc
acgtctgccattagccttgcacccccacgagaaatagaccaccagtacaccaacaagctc
tgtgatgctatgaaaccttttggggtgtttgaagatgaagaggaattgaaccatagactt
gcagtccttggaaagttgaataactttgttaaggaatggatcgcagagatcagtgaacta
aagaacctcccaccatctgctataagctgtgttgggggcaagatatttacatttggttcg
tacagacttggagtgcacacaaaaggagctgatattgatgccttatgtgtggctccccgc
catgtagagagaagtgactttttccagtctttctttgagaaattcaaacagcacgaagag
atcaaagatttaagggctgtcgaagacgcctttgtgccagtgataaaattcaaatttgac
ggaatagagattgacctgctgtttgccagactggccttgcagtccattccagacaacttg
gacctgaggggggactccatcctgagaaacttggacattcgatgtatccgcagtctcaac
ggctgtcgagtgaccgatgaaattctttacctggtgccaaacaaagaaaacttcagactg
acattgagagccatcaaactgtgggccaaacgtcgtgggatatactccaacatgctgggg
tttctgggtggagtgtcatgggccatgttggtggccaggacctgccagctctacccaaac
gctgtagctgcgacgctggtccacaagttcttcttggtgttttccaaatgggagtggcca
aatcctgtgctattgaaacagcccgaggacagtaatctgaatttacctgtgtgggatcct
cgagtgaacccatcggaccgataccacctgatgcccatcatcacgcctgcctatccccag
cagaactccacgtacaacgtctccacatcaacacgcaccatcatgagcgaggagttcaaa
tacggcctcagcgtcacagacgagattcttcagggaaaagcagaatggtcaaaactgttt
gaaccacccaactttttccaaaaatacaaacattacatcgttctgactgccagtgcctcc
acagaagaaaaccacttggaatggatcggtctggtggagtcaaagatccgtgttctggtg
ggaaacctagaaaggaatgagtacatcaccctggctcatgtcaacccccagtccttcccc
gggtccaaagagaaccgcaacgagaacgattttgtgtccatgtggttcattgggatcatc
ttcaagaaagtggagaatgcagagagcgtgaacatcgacctgacatacgacatccaatct
ttcacagacactgtgtacagacaagccaacaacatcaacatgctgaaggatgggatgaag
attgaagccacacatgtgaagaagaaacagctccatcagtaccttcctcctgaactggtg
cagaagaagaagaggagcatagcagagttgaaccgcagctctaacggggggagctctaag
cggatctctctggacagcagtcacctggacagctccagagacacagactcagggacgccc
tttacctccccagccagcaaaccctctaagcctgtttccgacacagaggacagcgtcagc
cctcccaagcagatttttgtggatggctccccagcacccagtgcggcagcacctgctcca
gaccagggcatgtccatcccagtcattggctcaaagccagcggttaaagcaaagtctcct
tccccaccagccagcagctccgtccccacggtgctgagtggggatgtgcagcccaacgcc
agcagcagccccaaagaggagcccaacggcctggaggactctgtcaatggagctcctgga
gctcctgtcaagagaccccactcgccaacacaagaggacctggccaagaggcacaaagac
tcagaggtggtgtccaatgacgactctgcattcaaagagccctatccaccatcctgcgac
tcccacacacagggagaaggaccccagatcaccgcccttcctgagtcaaaggctaagccc
attccaacccttgatacctcaagaacacagagacttcccagcatggagctgccagacgcc
tcctcgcctctcccagcaagcaacagttgtcgcgtcgtgaaaaattccatcaaactggcc
ctcaaccgccacaacctcacacctcccaagcccccagtgtttgaggcttccctcacccct
gacgctcctcctgccactgaagaaaagggcatgtccattcctgtcattggctctaaacac
gtggcatcaaaacacgcggcgccccccgtgggcagctccatccccacattagtgagccga
ggagccgacccactgaacggagccaccgccaagagagcccactcccccactctggaggag
caggccaagaggctgaaagaaacagaaaaggccagaatccacatagcttga
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