Etheostoma cragini (Arkansas darter): 117960169
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Entry
117960169 CDS
T07493
Symbol
chrna1
Name
(RefSeq) acetylcholine receptor subunit alpha isoform X1
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ecra04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
117960169 (chrna1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117960169 (chrna1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117960169 (chrna1)
Ion channels [BR:
ecra04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117960169 (chrna1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
TMEM138
Motif
Other DBs
NCBI-GeneID:
117960169
NCBI-ProteinID:
XP_034753747
LinkDB
All DBs
Position
17:3145672..3161171
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AA seq
459 aa
AA seq
DB search
MNLSNVQIFLAWILGVLAGLVFCSEDETRLVKNLFTGYNKVVRPVNHFSEAVVVTVGLQL
IQLISVDEVNQIVTSNVRLRQQWLDVNLKWSPDEYGGIRKIRVPSTDIWKPDLVLYNNAD
GDFAIIHETKVLLEHTGMITWNPPAIFKSYCEIIVLHFPFDLQNCSMKLGTWTYDGLLVV
INPDSDRPDLSNFMESGEWVLKDYRSWKHWVYYTCCPDTPYLDITYHFLMLRLPLYFIVN
VIIPCMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKY
MLFTMVFVIASIIITVIVINTHHRSPSTHTMPAWIRKVFIETIPNMMFFSTMKRPSQEIR
QKRLFPTDMDISDISGNPTPTSVTYQSPIAKNPDVRSAIEGVKYIAETMKSDEESNNAAE
EWKFVAMVLDHILLCVFMAVCIIGTLAVFAGRLIELNML
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctctaatgtccagatctttctggcatggattctcggtgtacttgccggtcta
gtattctgctcggaggatgagactcgtctggtgaaaaacctatttactggttacaacaag
gtggtccggcccgttaaccacttcagcgaagccgtagtggtcaccgtgggactgcagcta
atacagctcatcagtgtggatgaagttaaccagattgtgaccagtaatgtccgtctcaga
cagcaatggctagatgtgaacctgaagtggagtccagatgaatatggaggcatccggaag
atcagagtcccttcaaccgacatatggaaacctgacctggtgctatacaacaacgctgat
ggggactttgccatcattcatgaaactaaagtcctgttggagcacactgggatgataacg
tggaaccctccagccatctttaagagttactgtgagattatcgtcctccacttcccattt
gacctgcagaactgtagcatgaaactgggaacctggacatacgatggactgctggtcgtc
atcaatccagacagcgatcggcctgacctaagtaactttatggagtcgggtgaatgggtg
ttaaaggactacaggagctggaaacactgggtttactacacctgttgtcctgacacacct
taccttgacataacctaccacttcctgatgctgcggctgcctctctatttcatcgtcaac
gtcatcattccctgcatgctgttctcttttctcaccggactggtcttctacctgcctact
gactccggtgaaaagatgactctatccatctccgtcctgctgtctctgactgtcttcctg
ctggttatcgttgagctgatcccttccacttccagcgcagtgcctctcatagggaaatac
atgctcttcacaatggtgttcgtcatcgcctccatcatcatcacagtcatcgtcatcaac
acacatcaccgctcgcccagcacgcacaccatgcccgcctggatccgcaaggtctttatc
gaaaccattcccaacatgatgttcttttcaacaatgaagcgccccagtcaggagatccgg
cagaagaggttgttccctactgacatggacatctctgacatctcaggtaaccccaccccc
accagtgtcacctaccagtctcccatcgctaaaaaccccgatgtccgcagcgccatcgaa
ggcgtgaaatacattgctgagaccatgaaatcagacgaggaatctaacaatgcagcggag
gagtggaagtttgttgccatggttttggaccacatcctgctctgtgttttcatggctgta
tgcatcatcggaacgcttgccgtctttgctgggagactcatcgagctcaacatgctgtag
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