Etheostoma cragini (Arkansas darter): 117960198
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Entry
117960198 CDS
T07493
Symbol
pdzd8
Name
(RefSeq) PDZ domain-containing protein 8
KO
K24060
PDZ domain-containing protein 8
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
117960198 (pdzd8)
Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
117960198 (pdzd8)
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GFIT
Motif
Pfam:
PDZ_6
C1_1
PDZ
PDZ_2
MMM1
GRASP55_65
C1_2
Motif
Other DBs
NCBI-GeneID:
117960198
NCBI-ProteinID:
XP_034753806
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Position
17:complement(25339533..25382632)
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AA seq
1216 aa
AA seq
DB search
MIYLILISAFSGAVVTLILQFLLLYRRSPEPIGRTVQYVKVVPDNALKDYFNTQHVEPGQ
QQDSTASPASKQQEAVSTRQQEAAVPGGSPKQPPPPLPPPPPPPHSEPAEAAKPETCNFL
NAIFLFLFRELRDTPLVRHWLTKKIKVEFEELLQTKTAGRLLEGLSLRDISLGNSLPVFK
SARLMKPLKLNDDGMPEELNFEVDIEYNGGFHLAIDVELVFGKSAYLFVKMKRVVGRLRL
QFTRMPFSHWSFSFLEDPIVDFEVKSQFEGRPLPQLTSIIVNQLKRVIKRKHTLPNYKIR
YKPFFPFQVQPQLVPACDLDLSIQDNRLVEGRLKVTLTECSRLFILGSYERETYVHCTLE
LSTHQWKEKTRSSIKRTEVIKGPCGSVGMTFRHVPASEGDAVHVSIETVTPNSPAALADL
QRGDRLIAIGGVKVTSSVQVPKLLKQAGDRVVVLYERPVRHQTPSFGSLGTLQEGFGQLE
ETGFISQPGGYEEDPAPITTLSDTPDSKDMDSEFEELIVDSKQSQTSVPNSSTANTSDTK
EDSLLTVNQSPKRTVANLASKPLGTISPILNRKLNLVGLQSPLKPHPKESPKPSPHKTCS
DSVDVLQRPTVPPPPPPSRPPVPPRPQIRLTSASSETSLLEGIDSVTTTNTTVVVPSTTT
TISASEKSPEKSPLPGANEEKAGPEKIGVKQAEAKQSTRPAESSDDLPVPSTVTSSSKAD
QAKEKASESSCNTRDGLEDHSLWESPETMFRNHTARWPKASVVFEVESNHKYLNVALWCK
DPFKLGSLLCLGHVSLQLEHVALECMATSSAEYQSTFRLGPPEPRANVSRTALRSLGTHK
GFNEKLCYGDVTLNFCYLAEGEFEYQGGLAEKEREGSLHDEDLREREQIPTAQRDDLAYS
TMQLVEVRHNFQDTQFQNPTWCEYCKKKVWTKAASQCMICAYVCHKKCQDKCLTENPLCV
AATERRGADPEAKSTINRATTGLTRHIINTSSRLLNLRQVPKTRLVEQVADVVPGVVEPS
PKHTPNTSDNESSDTETYTSGASPSKQPIGSGGSSKLVRKEGGLDDSVFIAVKEIGRDLY
RGLPTDERSQKLELMLDKLQQEIDQELEHNNALLLEEREATDVRRKALISTALAKSGERL
QALTLLMIHYRAGIEDLESVESTSPSEQQGFKGKGEGLEEEALMGAEVYDSDICSPVEVQ
LLDDITEEQICVEALH
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgatttacttaatattgatctccgcgttctccggagcagtcgttacgttgatattacag
tttttgctgctgtaccggaggagccccgagcccataggcaggacagtgcagtatgtgaaa
gtagtgcctgataacgcgctgaaggattactttaatacccaacatgtcgagccgggccag
cagcaggacagcacagcgtccccggcatctaaacagcaagaggccgtgtcaacgcggcag
caggaagcggctgtccccggcggcagccccaagcagccgccgccgccgctgccgcctccg
ccgccgcctccccacagcgagcccgccgaagcggccaagcctgaaacgtgcaatttccta
aacgcgatatttctgtttctgttcagggagctccgagacacccctctcgtgagacactgg
ctcaccaaaaagatcaaggtggagtttgaggagctgctgcagaccaagacggcaggtcgg
ctcctggaggggctcagtctcagggacatctccctgggtaattccctgcccgtctttaaa
agcgccaggctcatgaagccgctgaagctgaacgacgacggcatgcccgaggagctcaac
ttcgaggtggatatcgagtacaatggcggcttccacctggccatcgacgtcgagctggtg
ttcgggaagtctgcctacttgttcgttaagatgaagcgcgtggtgggcaggctgaggctg
cagttcacgcgcatgcccttctcccattggtccttctccttcctcgaagacccgatagtg
gattttgaggtgaagtcccagtttgaaggaaggccgctgcctcagctcacctccatcata
gtgaaccagctgaaacgggtcatcaagaggaaacacaccttacccaactacaaaatcagg
tacaagcccttcttcccgttccaagtgcagcctcagctggtcccagcgtgtgatttggac
ctgtcgatccaggacaacaggctggtggagggccgactcaaagtcaccctcactgaatgt
agcagactgttcatcctgggctcctatgagcgagaaacctatgtccactgcaccctggag
ctgagcactcaccagtggaaggagaagactcgcagctccatcaaacggacggaggttatc
aaggggccttgtgggagtgtggggatgacgttccggcacgtccctgccagcgagggggat
gcagtgcacgtcagcattgagacagtcacccccaactcccctgctgccttggcagacctg
cagaggggggatcggctcatcgccatcggaggtgtcaaagtgacatcctcagtccaagtg
cccaaactgttgaagcaggctggagacagagtggtggtactctatgagagaccggttcgt
caccagactccctcttttggaagtcttggaactcttcaggaagggtttgggcagctagag
gaaactggttttatttctcagccagggggttatgaagaagacccagcccccatcaccacc
ctttctgacacacctgacagcaaagacatggactctgagtttgaagagttgattgtggac
tccaaacagagccagactagtgtccctaacagcagcaccgcaaataccagtgatactaag
gaggattccttacttacagtaaaccaaagccccaaaaggactgtggccaacttggcctct
aagccccttggtaccatatcccccatccttaaccgaaagttaaaccttgtgggtctccag
tcaccactaaagccccatcccaaagaatcaccaaagccctcaccacataagacttgtagt
gattcagtggatgttctgcaacgccccactgtacctcccccacctccaccttctcgcccc
ccagtgccaccaagacctcagataaggttgacatcagcctcatcagaaaccagtcttttg
gaaggcattgattctgttacaactaccaataccactgtggttgttccttccactactacc
accatcagtgcgtctgaaaaatctccagaaaagtctcctctccccggagccaatgaggaa
aaagccggccctgagaagataggtgtcaaacaagctgaggcgaagcagtctaccaggcca
gcagagtccagtgatgacctgccagtcccttcgactgtgaccagcagcagcaaagccgat
caagctaaggaaaaggcttcagagagctcctgcaacacacgggacggtctagaggaccac
tctctctgggaatccccagaaaccatgtttcgtaaccatacagcacgttggcccaaggcc
tctgttgtctttgaggtggagagcaaccataagtaccttaatgtggccctgtggtgcaaa
gatccctttaagctgggaagtttgttgtgcctgggccatgtcagcctccagctggaacat
gtagccctggaatgcatggccacatcttcagcagagtaccagagcacctttaggttaggg
cctccagagcccagagctaatgtcagccgcactgctctacgcagcctcggcacccacaag
ggctttaatgagaagctgtgttatggagatgttactctcaacttctgttacttagctgag
ggtgagtttgagtatcaaggagggctggcagaaaaagagcgggagggcagtcttcatgat
gaggatctaagggagagggagcaaatccccactgcacagcgtgatgacttggcctacagt
accatgcagttggtggaggttcgtcacaactttcaggacacccagttccaaaaccccacg
tggtgtgaatactgcaaaaagaaggtttggaccaaggcagcctctcaatgtatgatctgc
gcctacgtttgccacaaaaagtgccaggacaagtgcctcactgaaaatcccctctgtgtg
gcagcgactgaacgtcgcggagctgaccctgaggccaaatcaaccattaaccgggccacc
actggcctaactcggcatatcatcaacaccagctcccgcctgcttaacctccgccaggtg
cccaaaactcggctggttgagcaggtggctgacgtggtgcctggagtggtggagccctca
cccaagcatacccccaacacttcagacaatgagagcagcgacactgagacctacaccagt
ggcgccagcccctcaaagcagcccatcggcagtggtggcagcagtaaacttgtacgtaag
gaaggtggtttggatgacagtgtgttcattgctgtgaaggagataggccgagacctgtac
cgggggctgcccacagatgagcgctcccagaagcttgagttgatgctggacaagctgcag
caggaaattgatcaggagttggagcacaataacgctcttctgctggaggagagggaggcc
acagatgtccggcgtaaggccctaattagtactgccctggccaagtctggggagagactc
caggccctcaccctgctgatgatccactaccgggcaggcattgaagacctggagtcagtg
gagagcacctctccttcagagcagcaaggctttaaaggcaaaggagaaggcctggaggaa
gaggccctgatgggggcagaggtctatgacagtgacatatgtagccctgtggaggtgcaa
ctgctggatgacatcacggaggagcagatctgtgtggaggcgctccactga
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