Etheostoma cragini (Arkansas darter): 117960286
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Entry
117960286 CDS
T07493
Symbol
srfb
Name
(RefSeq) serum response factor b isoform X1
KO
K04378
serum response factor
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117960286 (srfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117960286 (srfb)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
117960286 (srfb)
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
117960286
NCBI-ProteinID:
XP_034753983
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Position
17:17580691..17604967
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AA seq
600 aa
AA seq
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MLPSRAGSAPSGNGSPSGRGNTGHGSGLVGSGSRPVLVRAGLALPGVSESAGATGRQGQR
DAVGMLGANGPGGPRGARPGNGTGVTPLQTAVQGNMVGLNEGVVLPHGARFNPDRESAPI
CSGSDNDSDSGDDDDPVGSLGDSRRGVKRERGEMEASVTGQDVGISPGGYGMVPGGVAGA
KPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHV
YTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSESE
SMGDIKDTLKPTFTVASLPGSTSSAQCTVPTTSTTMQVSSGPSFPITNYLAPVSASGNIS
ANGTVLKTAGASGVMQLPGGFTFMPAGTPLPPGTPTIPLSQLQQHSLALQGQHGQTLAAA
SQSQQGQQAVFRFPAAVSLTGAGVPQQLQAITVHHSTQSTSNSDSSLDICHTSTNSTATV
SLPATIVTSSVPTSVAGHMMYPSPHTVMYASTPGMTDGGLAVLNAFSQGTSTMQVSHAQG
QDSGAVPQVFLTAPQGTVQIPVSAVQLHPMVIGQQSSGSSSNLTELQVVNLDAAQNSKSD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagtcgggctggatcggcaccatctggaaacgggtcaccttcaggcagaggt
aacacaggacacgggtcggggcttgtcgggagcgggagccgtcccgtgttggtcagagca
gggctagctttaccaggggtcagcgagagtgccggtgctaccgggcgacaggggcaaaga
gacgccgtcgggatgctgggggctaatggtccagggggtccgagaggtgccagacctggg
aacggaactggggttactcctctacagaccgccgtccagggcaacatggtggggctaaac
gagggagttgtgttgcctcacggagcgaggttcaacccggacagagaaagtgctcctata
tgcagcggctcggacaatgactctgactccggagatgatgatgacccagtgggttcactc
ggggacagcaggagaggggtgaagcgggagagaggggagatggaagcttcggtgacgggg
caggacgtgggaatatctcccggaggttacggcatggtacccggaggggtcgccggggct
aagccagggaagaaaacacgtgggcgagtaaagataaagatggaatttattgacaacaag
ttgagacggtacactactttcagcaagaggaagactggtattatgaagaaggcctatgaa
ctctccacgctgacgggaacccaggttctgctgctcgtggccagtgaaacgggtcacgtc
tacacttttgccacccgcaaactccaacccatgattacaagtgaaacgggcaaagctctg
atccaaacatgcctcaactcgccggactcgccgccgcgctctgacccctccacggaccag
cgcatgagtgccacgggctttgaggagacagacctcacctatcaggtgtctgagtctgag
agcatgggcgacataaaggatacactgaaacccacgttcacggtagctagcctaccaggc
agcaccagcagcgcccagtgcaccgtacccaccacctccaccaccatgcaggtgagcagc
ggaccttcgtttcccatcaccaactacctggcgcccgtctcggccagcggcaacatcagc
gccaacggcaccgtcctcaagaccgccggcgcctcaggagtcatgcagctgcccgggggc
ttcactttcatgcctgcaggcactcctctcccccccggcacccccaccattcctctgagc
cagctgcagcagcactccctggccctgcaggggcagcatggtcagaccctggctgccgcc
tcgcagtcacagcagggacagcaggctgtcttccgcttccctgctgctgtctccctcaca
ggagcaggggttccccagcagctccaggctatcacggtacaccacagcacccagtccacc
tccaacagcgacagcagccttgacatctgccacacgtccacaaactccaccgcgacggtg
agtctcccagcaaccatcgtcacctcgtcagtgccaacgtctgttgcgggtcacatgatg
taccccagcccgcacacagtgatgtacgcctccacgccggggatgactgacggggggctg
gctgtgctcaacgccttctcccagggcacgtcgaccatgcaggtgtcccacgcacagggc
caggactccggtgccgtccctcaggtgttcctcacagcgcctcaaggcacggtgcagatc
cccgtctctgcggtgcagctacacccaatggtgattggccagcagtcgagcggcagcagc
agtaacctgacggagctccaggtggtcaacctagacgcagcacagaactcaaagagtgac
tga
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