Etheostoma cragini (Arkansas darter): 117960365
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Entry
117960365 CDS
T07493
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117960365 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117960365 (dis3)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
117960365 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Dis3l2_C_term
Voldacs
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
117960365
NCBI-ProteinID:
XP_034754095
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All DBs
Position
17:complement(8101308..8109543)
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AA seq
954 aa
AA seq
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MLKSKTFVKKTRSGGVMKIVREHYLRDDIWCGSEVCTECKQESTVLQRDACIESNLCSYP
HYVIPDTNVVLHQIDVLEDPVIRNVIILQTVLQEVRHRSAPVYKRLKDIIHETEKHFYAF
TNEHHRETFIEREPGESANDRNDRAIRVAATWYTQHLKTSESNADGLKVVLLTNDQGNKQ
KAEESGLLVYKCEEYIKSLIGNPELVDRLALSNDDKHDITSSKVLFPEHLPLSKIQAGIK
SGAFVQGTFRASRDNYLEATVFVQGDGEESTEILIQGLQNLNRAVYQDVVAVQLLPQNQW
VAPSSVVLQDEGAAKDDNNDEEDDEDEEKALRISAAEAARKPTGKVVGIIKRNWRPFCGM
LNISQIKESTRHLFTPADRRIPRIRIETRQASTLAGQRIMVAIDGWPRHSRYPNGHFVRS
LGKAGEKDTEQEVLLLEHDVPHQDFSQAVLSFLPKMPWTITPEEMARREDLRNLTVCSVD
PPGCTDIDDALHCRELDNGNLEVGVHIADVSHFIRPGNAMDREAANRGTTVYLCGKRIDM
VPELLSSNLCSLRSNVERLAFSCIWEMNHKAEILKTRFTKSVIKSKASLTYAEAQMRIDD
TTKNDDITKSLRGLNKLAKILKRQRIEKGALTLSSLEVRFHIDSETHDPIDLQAKELVET
NSMVEEFMLLANISVAQKIYDEFPDCAMLRKHPAPPPSNYDILLKAAKSKDVEIHTDSAK
ALADSLDVARVDGFPYFNTLLRILATRCMMQAVYFCSGMDSDFHHYGLASPIYTHFTSPI
RRYADIIVHRLLAVAIAADTTYSDLMDKQKQSALASNLNYRHKMSQYAQRASVAFHTQLF
FKSRGILNEEGFVLFVRKNAIIVLIPKFGLEGTVFFDAKDKAGPKLVFDEEGPTLNVEQH
TFRIFDKVKVTISLDASNIQHQKIRMSLIDPVIPGVSVPAPDVEPQAKKPKLDR
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaatctaaaacctttgtgaagaagacccgctcgggtggggtgatgaagatagtg
cgcgagcattatctgagagatgatatttggtgcggaagcgaagtttgcactgaatgcaaa
caggagtccacggtgttgcagagagacgcatgtattgagagcaacttgtgctcttatcca
cattatgtgatccctgacactaatgtggtgctgcaccagattgacgtgttggaagaccct
gtgatccgtaatgtgataatccttcagactgtgctgcaggaggttcgccaccgcagtgca
ccggtctataaacgcctgaaggacatcatacatgagacagagaaacacttctatgctttt
accaacgaacaccatagagagacatttattgaacgtgaaccgggggaaagcgccaacgac
cgtaacgaccgtgcaatccgtgtggcggcaacatggtacacccagcacctgaagacatct
gagtccaacgcggacggactcaaggtggtcctccttaccaatgatcaagggaacaagcaa
aaggcagaggagagcggcctgctggtgtacaaatgtgaggagtacatcaagagcctgata
gggaaccctgagcttgtggatcgtctggctttgtccaatgatgacaagcatgacatcacc
agcagtaaggtgttattcccagagcacctccctctgtccaagatccaagcgggaatcaag
agtggcgcattcgtccagggcacctttagggccagcagggacaactatctggaggccaca
gtctttgtccagggagatggggaagaaagcacagagattctcatccagggtcttcagaat
ctcaacagagcagtgtaccaggatgtggttgccgtgcaactgttgccgcagaatcagtgg
gtggcgccctcgtcagtcgtgttgcaggatgaaggggcagcaaaggacgataataatgat
gaggaggatgacgaggacgaggagaaagcgttgaggatatcagcagctgaagcagccagg
aagcccacaggcaaagttgtgggaatcatcaaaaggaactggaggccattttgtggcatg
ctcaatatctcccaaattaaagagtcaacccgccatcttttcaccccggcagatcgccgt
atcccacgcattcgcattgaaacgcgtcaggcatccacactggcaggccagaggatcatg
gtggccatcgatggctggcccagacactccagatatccaaatggtcactttgtgcgcagt
ctgggaaaagcaggggagaaggacacggagcaggaggtgctgctgctggagcatgacgtc
ccccaccaggacttttctcaggccgtgctcagtttccttcccaagatgccgtggaccatc
acaccagaggaaatggcgaggagagaggacctgaggaatctgacagtgtgcagcgtggat
cctccgggatgtacagacattgatgatgccctacactgtagagagctcgacaatggaaac
cttgaggtgggcgtccacattgctgacgtcagtcacttcatcagacctggcaatgctatg
gacagagaggctgcgaaccgtggcaccactgtctacttgtgtggcaaaaggatagatatg
gttcctgagctgctcagctccaatctttgttctctacgctccaatgtagaaaggctggcc
ttctcatgtatctgggagatgaaccacaaggctgaaattcttaagacccggttcacaaaa
agtgtaattaagtccaaggcatctttgacctacgctgaggcccaaatgaggattgatgac
accaccaagaatgatgacatcaccaagagcctgcgaggtctcaacaaactcgccaaaatc
ctcaagaggcagaggatagagaaaggggcgctgacgctgtcgtccttagaggtccgtttc
cacattgacagtgaaacccacgaccccattgacctccaggcaaaagaactcgtggagaca
aactccatggtagaagagttcatgttgctggccaacatttcagttgcccagaagatttac
gacgaatttcccgactgtgcaatgctaaggaaacatccggcaccacctccatcgaactac
gacatcctgctcaaggctgcaaagtccaaggatgtagagatccacacagattcggccaag
gcactggctgactcccttgacgtggccagagtggatggcttcccgtactttaacactctc
ctgcgcatcttggccactcgctgcatgatgcaggctgtctatttttgttctggcatggac
agcgatttccaccactatggccttgcttcacccatttacacacacttcacgtcacctata
aggagatacgcagatatcatagtacaccgcctgctggcagtggccatagcagcagacacc
acctactcagatttgatggacaaacaaaagcagtcagctctcgccagcaacctcaactac
agacataaaatgtctcagtatgcacagagagcatctgtggccttccacacacagttgttc
ttcaaaagccgaggcattctgaacgaagagggatttgttctgtttgtgaggaagaatgca
atcatcgtactcatcccaaagtttggcctggagggaacggtgttctttgatgccaaagac
aaggcgggcccgaaactcgtttttgatgaagagggtcccactctgaacgtagagcagcac
accttccgcatatttgacaaggtgaaggtcaccatcagcctggacgcctccaatatccag
catcagaagatccgcatgtctctcatcgaccctgtgatccctggtgttagtgttccagcc
ccagatgttgaaccacaggccaagaaaccaaaactggaccgctga
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