Etheostoma cragini (Arkansas darter): 117960453
Help
Entry
117960453 CDS
T07493
Symbol
itga9
Name
(RefSeq) integrin alpha-9
KO
K06585
integrin alpha 9
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04510
Focal adhesion
ecra04512
ECM-receptor interaction
ecra04514
Cell adhesion molecule (CAM) interaction
ecra04518
Integrin signaling
ecra04810
Regulation of actin cytoskeleton
ecra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117960453 (itga9)
04514 Cell adhesion molecule (CAM) interaction
117960453 (itga9)
04518 Integrin signaling
117960453 (itga9)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117960453 (itga9)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117960453 (itga9)
04810 Regulation of actin cytoskeleton
117960453 (itga9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117960453 (itga9)
Cell adhesion molecules [BR:
ecra04515
]
Integrins
Integrin alpha subunits
117960453 (itga9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP
FG-GAP_3
Integrin_alpha
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
117960453
NCBI-ProteinID:
XP_034754253
LinkDB
All DBs
Position
17:14954866..15002963
Genome browser
AA seq
1034 aa
AA seq
DB search
MVRIGMAPLRRHKTGVQNVLYVYLSISVAYSYNIDLEHPLLFRGPSSSFFGYSVLEHYHD
NTRWVIVGAPRANSTYSTSVQSPGAVYKCRVHSNPDRRCTEIDLERGNKPRESCGKTCQG
DRDDEWMGVSLARQDSANGQILACAHRWKNVYYDSEHILPHGYCSIIPPTLQGRRKPLIP
CYEDYKQKYGEEHGSCQAGIAGVFTEELVVMGAPGSYYWTGTIKVYNLTSDSFYSLNKED
VDSHRYSYLGYAVTAGHFSSPNVIDIAAGAPQHSGSGKVYIFKIDGVSLVKSFQASGKMM
GSYFGSSLCAVDLNQDGLSDLLVGAPMHSQLRDEGQVTVYLSKGNGVMEEEGVLTGDNAF
NAHFGECIAAIGDIDDDGYQDVAIGAPKEDDYGGAVYIYHGDPTGIISKYSMKLSGRSIN
PGLQMFGQSISGNVDMDGNGYADITIGAFMSDGVVLLRTRPVITVDVSIFLPVSINISVP
QCHEGHHNLNCFNVTVCMLFRGRQLPGHIELLYNLTADVDKRQKSQPSRVYFTQSGSQIS
QMSRQLFLEINREQCQRYTAYVKKDVKDVFTAITFEVSYSLGTHVLTGHQERDLPALTPV
LRWRKGNKIAERNETWFEKNCLSDDCAADLRLHGKLLLSGLHSEHHLALGGVKNISLNLT
ISNAGDDAYDTNIYFNFSREVFYINFWQKEEKGISCGLVDLDFLKCSVGFPFMRAQTKYH
FAVIFDTSQLSGENDTLQFLVQAKSANPEHKLSDNILDLSIPLVHETDTTITGVVTPSSF
VYGNSIDASRFVQLEDMECNFQPLNLTFQAINKGPSRLPGSTVDIRIPNRLAGSGADMFH
IIETQVAEGRGNCTPHRNPTPCTIPQDRESIFHSIFAFFTKSGRKVLDCDRPGRACMTIS
CSLGPQLKEEALSIDIKLLLNTEILKRDSSSVIQFVTRGNVQVNERAVEVPKGLPEDISL
VFEALHSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRRYREIIEAEKNRKDS
DESWDWMEKNHSDL
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgcatagggatggctcctcttcgcagacacaaaacgggagtacaaaatgttttg
tatgtctatctctctatttcagtggcttattcttacaatatagacttagaacatcctttg
ttgttccgcggaccaagttctagtttttttggctattcagtgctggagcattatcatgac
aacacacgctgggtaatagtaggtgctccaagggcaaactctacctacagcacctctgtg
caatctcctggagctgtatataagtgtcgagttcacagcaacccagatcgccgctgcacg
gagatcgatctggaaagaggaaacaagcccagagagtcgtgtgggaagacttgccaagga
gacagggatgatgagtggatgggggtcagtctggcccgccaggacagtgccaacggccaa
atactggcctgtgctcaccgctggaaaaatgtgtactacgactccgagcatatccttcca
catggatactgctccatcattcctcccactcttcagggcaggagaaagccgctcatccct
tgttatgaagactataagcaaaagtatggggaagagcacggctcgtgccaagccgggata
gcgggagtttttacggaggagctggtggtgatgggagcaccggggtcatactactggact
gggacgatcaaggtgtacaacctgacttctgactctttctacagcctgaacaaagaagac
gtcgactcacacagatacagctaccttggctatgctgtgactgctggacacttctcgtct
cctaatgtgatagacatagctgcaggggcccctcagcacagcggcagtggaaaagtttac
attttcaaaattgatggtgtttctttggtgaagagttttcaggcctcagggaaaatgatg
ggctcttactttggctcctcattgtgtgcagttgatctgaaccaggacggcctgtcggac
ctgctggtgggggcacccatgcacagccagctccgggatgagggccaggtgactgtgtac
ctcagcaagggcaatggggtgatggaggaggaaggtgttttgactggtgacaatgctttc
aatgcacactttggagaatgcatcgccgcaatcggagacatagatgacgatggatatcaa
gatgtagccataggagcaccaaaagaggatgactatggaggagctgtatatatctaccat
ggggatcccacaggaatcatcagcaaatactccatgaaactgtctgggcgcagtataaac
cctggtctgcagatgtttggccagtcaatctcaggcaatgtggacatggatggcaatgga
tacgcagatatcactattggagctttcatgtcagatggtgtggtgctgctgaggacccgg
cctgtcattaccgtggatgtctccatcttcctgcccgtctccatcaacatctctgtgcca
cagtgccacgagggtcaccataacctaaattgcttcaacgtcactgtgtgcatgctcttc
agggggagacagctgcctggacacattgagttgctgtataacttgacagctgatgtggat
aagcgacagaagagccagccttcccgggtctacttcactcaaagtggatctcagatcagc
cagatgagccggcagctcttcttggaaatcaacagggagcagtgccagcgctacactgcc
tacgttaagaaagatgtgaaggacgtgttcacagccatcacgttcgaggtgtcttacagc
ctggggacgcacgtgctgacgggacaccaagagcgagacctgccagcacttactccagtg
ctacgatggaggaaaggaaacaagattgcagaaaggaatgagacttggttcgagaagaac
tgcttgtcggacgactgtgctgcagacctgaggcttcatgggaaactgttgctctctggg
ttgcacagcgaacaccatttggcacttggaggagttaagaacatttctttgaacctgact
atctctaacgctggggatgacgcctacgacaccaacatctacttcaacttctccagagag
gttttctacatcaacttctggcagaaggaagagaagggtatttcctgtggacttgtcgat
ttggacttcctcaaatgcagcgtgggatttcccttcatgagagctcagactaagtatcat
tttgcagtgatttttgacacgagtcagctctctggggaaaatgatacattgcagttctta
gttcaagctaaaagtgccaatcctgagcacaaactctctgataacattttggatctgtcc
atccctctggttcatgagaccgacacaactattactggcgtggtgacgccgagctccttt
gtgtacggaaactccatcgatgcctcgcgcttcgtccagttggaagacatggagtgcaac
tttcagcctctcaatctcacttttcaggccataaacaaggggcccagtaggctgcccggc
tccactgtggacatcaggatacccaatcggctggctggcagcggagctgacatgttccac
atcattgaaacacaggtggctgagggtcgagggaactgcactcctcacaggaacccgacg
ccgtgcaccattccccaggacagagagagcatcttccactccatatttgccttcttcacc
aaatcaggacgcaaagtcttggattgtgaccgccctggaagagcctgcatgactatttcc
tgcagtctgggcccgcaattaaaagaagaagctttgagcatagatataaaacttctactt
aacacagaaattctcaaaagggatagttcctctgtgatccagtttgtgacgaggggcaac
gtgcaagtcaatgaaagggcagtggaggtgcctaagggcctgccagaggacatttctctg
gtgttcgaggctctccacagtcaagagccaaggggttacgtagtcggctggatcattgcc
atcagtctgctggtgggaatcctcatctttttgctattagctgtgctactctggaagatg
ggatttttccgtcggcgctacagagagatcattgaggctgaaaagaacaggaaggacagt
gatgaaagttgggactggatggaaaagaaccactcagatttgtag
DBGET
integrated database retrieval system
