Etheostoma cragini (Arkansas darter): 117960460
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Entry
117960460 CDS
T07493
Symbol
npas4l
Name
(RefSeq) neuronal PAS domain-containing protein 4-like isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117960460 (npas4l)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117960460 (npas4l)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
PAS_2
PAS_9
HLH
Per3-like_PAS-A
Motif
Other DBs
NCBI-GeneID:
117960460
NCBI-ProteinID:
XP_034754271
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Position
17:17203780..17214182
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AA seq
781 aa
AA seq
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MNIWCKSYKCPVSAPCASRHLADGQRTSSRRRFRSTKGASKARRDHINHEIRNLRTLLPI
TQEDQERLSYLHSMAAICTYIRKSVLFQGLPAGGRSHCSLPYEAFLQALHGFILVTTAQG
RLVYVSENAAEYLGLSMIDVLQGDTFYDMVERSDIDIVKSNLDIKKNSSSERSFVCCMQT
TKAFKLQHGSCCSMMVRGRFQSFLQPCPSLSSACPTNQPLFVALCTPTVNRLQSPDSDFH
HSFNSVHRLDMSFTQLSDSVLYFLGCSAEEMTGRSWYGLVHPEDLSLSADSHRSLMQADD
SFQVEMVLRLQCKDLSWTWVYIRANKNSECQSVSCVNFIISETEARFLQEKISSDAFRPS
SLSLLNSCHFAGQQAPHAQSHNNTKCFKRQRSSDSQSEEPGSKARRESEQDLFFVACVSS
PGDSSPVPLGDSPAFFTPPYSPASSSTPLQQRELSHDLLMDVHGYTDQLLSSPECSPYYY
SYPEAELTCHQSPSDSLPAAAEQTFDQAASPLSSSSSSSSSSSSSSPTYDFQACSADARL
VPDCRFVSDMCESPVDCALHQDDFSLLEQPQGGSRVQMHHVPHHVLPIHSSLLTPNQSPT
STESNQYNEREQAEISILAQQISSLASSFAMYNTLSPLQNVAQPATTNTPASPCDWPHHP
PLTSGSLLKREMVLNDGVFDSILKDLDAVTRKSSMSSPGDVACSYQQGLLSCRSGPHQLE
QEPLWLSPPNREDPPPAEQFTAMDPFSLQSGHYDQNTELHQLNHYMQSALQQDGLAEENL
Y
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttggtgcaaatcgtacaaatgtcccgttagtgctccgtgcgcctctcgtcat
ctggccgacggtcagcgcacttcctcccgcaggaggttcagatccaccaaaggagcatcc
aaagctcgacgggatcacatcaatcatgagatcaggaatttgcgcactctgttgcccatc
acccaggaggaccaggagcgtctctcctacctgcactccatggccgccatctgcacctac
atcaggaagtctgttctcttccagggactcccagctggggggagatcacactgctctctg
ccatacgaggcctttcttcaagccctgcacggcttcatcctggtcaccaccgcacagggg
aggctggtctatgtgtccgaaaatgcagctgaatatctcggtctttccatgatagatgtg
cttcaaggagacactttctatgacatggtggaacgctctgacattgatattgttaaatca
aacctggacattaaaaagaactcatcatcagagaggagctttgtatgttgcatgcaaacc
accaaggccttcaagctgcagcacggcagctgctgttccatgatggtcagagggagattc
cagtctttccttcagccttgtccgtccttgtcttcagcctgtcccaccaaccagcctctg
tttgtggccctctgcacccccacggtcaaccgcctgcagagcccggactctgacttccat
cacagcttcaacagtgtccacagacttgatatgtccttcactcaactgtccgacagtgtt
ttatattttttgggctgttcggcagaagagatgactggtcggtcgtggtacggtctagtc
caccctgaagatctttctttgagtgcagattctcacagaagtttaatgcaggcagatgac
agcttccaggtggagatggtgctccgactccagtgtaaggatctttcgtggacttgggtc
tacattcgagctaacaaaaactctgagtgccagagcgtgagctgcgttaacttcatcatc
agtgaaacagaggccagatttctgcaggagaaaatcagcagcgatgccttcaggccatca
tctctatctctgttaaattcctgtcattttgcgggtcaacaggcgccacatgctcagagc
cacaacaacactaaatgctttaaaagacagaggagttctgacagccaaagcgaggagcca
ggatccaaagctaggcgggagtccgagcaagacttattctttgtggcgtgtgtctcctcc
ccaggcgatagctcacctgttcccttgggtgacagccctgctttcttcacccctccctac
agcccggcttcttccagcacccctctgcagcagcgggagctcagccatgacctcctgatg
gatgtgcacggatacacagatcagctgctgtcctcccctgagtgctctccctactattat
tcctacccagaggcagagctcacctgtcaccagtcaccctccgattccctccctgcagcc
gctgaacaaacctttgaccaagcagcctctccactctcttcctcttcctcctcctcctcc
tcctcctcctcctcatctccgacctatgatttccaagcttgttccgcagatgctcgatta
gtccctgactgccggtttgtgtcagacatgtgtgagagccccgtggactgcgctctgcat
caagacgacttcagccttctagagcagccacaagggggcagccgtgtccaaatgcatcat
gttccccaccatgtgttgcccatacattccagccttctcacccccaaccaatctcccaca
tccacagagtctaaccagtacaacgagagggagcaggcggagatcagtattctggctcag
cagatctcctccctggccagcagctttgcaatgtataacaccctaagtccacttcaaaat
gtggcccaacctgccaccactaacaccccggcctccccctgcgactggccccatcaccct
cctcttacctcaggctctctgcttaagcgcgagatggtcctcaatgacggcgtgttcgat
agcattctgaaagatctggacgcggttacaaggaaaagcagcatgtccagccctggtgat
gtagcatgtagctaccagcagggcttgttgagctgcaggagtgggccccatcagttggag
caggagcccctctggctctccccacccaacagagaggacccaccgcctgcagagcagttc
actgccatggatcccttcagtttgcagtcgggacactatgaccaaaacactgagttgcat
caactcaaccactatatgcagagtgcccttcagcaagatggacttgctgaagaaaacctg
tactga
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