Etheostoma cragini (Arkansas darter): 117960530
Help
Entry
117960530 CDS
T07493
Symbol
lrpprc
Name
(RefSeq) leucine-rich PPR motif-containing protein, mitochondrial
KO
K17964
leucine-rich PPR motif-containing protein, mitochondrial
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ecra03029
]
117960530 (lrpprc)
Mitochondrial biogenesis [BR:
ecra03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
117960530 (lrpprc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_24
PPR_2
PPR
PPR_long
PPR_3
PPR_1
ELYS
Motif
Other DBs
NCBI-GeneID:
117960530
NCBI-ProteinID:
XP_034754364
LinkDB
All DBs
Position
17:6123735..6174752
Genome browser
AA seq
1291 aa
AA seq
DB search
MPFHGATENMAALLRSARLLKFSPSGLLQITGTKRNGPTLSRLYSGALGGKGTGVCSRKI
SPASGNASSRVWPYAVGCVRNYAVATEQKDEASVAVRSKQAQQFDWALAKLDSSVRRTGR
ITKTLLLRIFHDICRTGYPSGNQALLLLRSCGSLLPEVPLEERSELAHRVWEKLQELGAQ
YDVSHYNALLKVYLQNEFKFSPTDFLAKMELANVQPNRVTYQRLIAAYCQNGDIEGASTI
LGFMKSKDLPITEAVFNSLVTGHACAGDIESAKNILSVMRAAGIEPGPDTYFALLNAYAA
KGDLDSLKKTMEAADSADCSVMDRDVMQVIFTLAKAGHQQHIPEMVERLRHERGYVPDAM
NLCLSLITQSQEDTAFHILKTFPTLQSESFNTESANLGNFFLRHCVNMDTSLEKIGRYCK
ELQESNLHTAALSFTLSCALEAKKLGMSLELMKMLKKQDFPIRPHYFWPLLTQHVKDSNT
AGVVEVVKGMQELEVCPDVETLSNYILPVFPSTEAARQALKDAGISLESEGFLSSEVRSV
AVSNLAELYTILSDPSCPSLDLSIFRGSLILGFRKSSDVESMVKVRCQCAHIVERLLHIV
VATAQVDEGGIAGNRHLLLVLLLQLKECGFVFLLTEAAFGLEYGWMDGIPITTIVEEAVD
ILKEMKEKEVVMNDTHVTMLFHTLNSVVAKGGAPTIRRLQDTIFTLGLAKPTANLCSPLI
TAYLDSKDLSGALEAALECQKRYNHLPRIHDIVVALVENGDTELLQKAMDFVSQERGEMT
MLYDLFFAFLQTGRYREARKIIETPGLRARPGRLHWYAEKCISSKQMEALEQMVDMTAKL
FECDRDEMYSYILRLCKETNDWQKAEAVWTKMQEDNVIPRERTLHMLADVLKNNGQEVPF
EVPETWYQQPATTQQVKSATTLPTVESGAEYQARLLALCKRGKAKEAYGMLKEVDKKGVA
LGPAPYDQLIRALLAEGSIEDAMAVKDIAASHVPGFQLSDIATNLLIITHSKKGQAKDAL
EKLKSMLQVDQVPSQLAVTRLVQALGSDGDVAGIQEVESLMKGLGTTLNLSSMVFVNNTA
LAHIKNGDMESAVEVLEAVFTSPNSTNPSMSFVFRKILEDDNDKALDKLSAMAERLANHF
GCYRPASDLFLQLLDMDKVEDAKFMLARCNALAEQKEVLVSYLSQKAQRPGQVGKIKALL
SLIPDFTEKEVVYPYLMKCHVLDKDLLSAKALQEQMQKGGTVIDELSLKRLAALYRNAGE
TVPFVEPPESFKFYADKLKERAAKAKTTIEA
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgcccttccacggtgcgacagaaaacatggctgcgctcttgagatcagctcggctactc
aagttttcgccttcgggcttgcttcagataacagggaccaaacgaaacgggccgacactt
agtcgtctgtacagcggagctctcggcggcaaagggaccggagtttgttcccgaaaaatc
agccctgcttcgggaaacgcgtccagtcgtgtgtggccatatgcagtggggtgtgtgcgt
aactatgctgtggccacggagcagaaggatgaggccagcgttgcggtgcggtccaagcag
gcgcagcagtttgactgggctctggccaagctggacagctccgtgaggagaaccggtcgc
atcaccaagaccctgttgctccgcatcttccatgatatctgcaggacaggttatcccagt
ggtaaccaggccttgttactgctgcgtagctgtgggtcgctgctgcctgaggtgcccctg
gaggagcgctctgagctggcacaccgtgtgtgggagaagctgcaggagttgggtgcacag
tatgatgttagtcactacaacgccttgctgaaggtttacctgcaaaatgagttcaagttc
tcccccactgacttcctggccaagatggaattagctaacgtccagcccaacagagttacc
taccagagactcatagcggcctactgtcaaaatggagatatcgagggagccagcaccatt
ttgggtttcatgaagagcaaagatttacccatcaccgaggctgttttcaactccctggtg
acaggccacgcatgtgcaggggacatcgagagtgctaagaacatcctgtctgtgatgcgg
gcagcaggaattgaaccgggtcccgacacttattttgcgctgcttaatgcctacgctgca
aagggagacctggacagtttaaaaaagactatggaggcagcagatagtgcagactgcagt
gtgatggacagggacgtcatgcaggtcatcttcactctggccaaggccggacaccagcaa
cacatcccagaaatggttgagcgcttgaggcacgagaggggctacgttccagatgccatg
aacttgtgtctgagcctcatcacccagagccaggaggacacagcttttcacatcctgaag
actttccccacactgcagtctgaaagcttcaacacagagtctgccaacctgggcaacttc
ttcctcagacactgtgtcaacatggacacgtcactggagaagatcggcaggtattgcaaa
gagctccaggagtctaatctgcacactgcggcgctcagcttcactctgtcctgtgctcta
gaggccaagaagcttgggatgtctttagagctgatgaagatgttgaagaagcaggacttt
cccataaggcctcactacttttggcccctgctcactcagcatgtgaaggacagcaataca
gctggtgtggttgaggtggtaaagggcatgcaggagctggaggtctgccctgatgttgag
actttatccaactacatcctccctgtcttccccagcacggaagcagctcgacaagccctc
aaggatgcaggcatctctttggagtcggagggcttcctgtcttcagaggttcggtccgtg
gctgtcagcaacctggctgaactgtacaccatactgtctgatccctcctgcccatcgttg
gacctcagtattttccgcggcagcctcatcctgggcttcagaaagtcttctgatgtggag
agcatggtgaaggtaagatgtcaatgtgcccacattgttgagcgcctcctccacattgtc
gtggcgacagcacaggttgatgagggtggcatagccggcaaccgtcatctcctcctcgtg
ctgctgcttcagctcaaggagtgtgggtttgtgtttctgctgacagaggctgcttttggg
ctggagtatggatggatggatggaataccaataacaacaatagtggaggaggcggtggac
atcctgaaggagatgaaagagaaagaggtggtgatgaatgacacacacgtcaccatgctc
tttcacacgctcaactccgtggtggccaagggcggcgcccccaccatcagacgtctgcag
gacaccatcttcacccttggactggccaagcccaccgccaatctctgctcacccctcatt
actgcctacctggacagtaaagacctgtctggagctctagaagcagcactggagtgtcag
aagcgctacaaccacctgcctcgcatccatgacattgttgttgctctggtggagaatgga
gacaccgaactgctgcagaaagccatggactttgtgagtcaggagcgaggagagatgacc
atgctctatgatctgttctttgcattcttgcagacaggccgctaccgtgaggctcgtaag
atcattgagaccccagggctgagggcacggcctggacgcctgcactggtatgcagagaaa
tgcatttcatccaaacagatggaggccttggagcagatggtggacatgacagccaagctc
tttgagtgcgacagggatgagatgtacagttacatcctccgtctctgcaaggagacaaac
gactggcaaaaggcagaggcagtatggacgaagatgcaggaggataacgtcattcccagg
gagaggaccctgcatatgctggcagatgtcctaaagaataatggccaggaggtgcccttt
gaggtgcccgagacctggtaccaacaacctgccaccacacagcaggtcaagtcagcaaca
accctccccacagttgaaagtggtgctgaataccaggcccgtctgttggccttatgtaaa
aggggcaaagctaaagaagcttatgggatgctgaaggaagtcgataaaaagggtgtggca
ttaggtcccgccccttacgatcaattgatccgggccctgttggccgagggatccattgag
gatgccatggcagtcaaggacattgctgcgtctcatgtgccgggctttcagctgagtgat
atcgccaccaatctgctcatcatcacacacagcaagaaaggccaggctaaagatgctctc
gagaaactgaagtctatgctgcaggtggaccaagtgccttcgcagctcgccgttaccaga
ctggttcaggccctgggtagcgatggcgacgtggcgggcatccaagaagtggagtcactg
atgaagggcctcggcacaaccctcaacctgtccagcatggtgtttgtcaacaacacggcc
ctcgcacacatcaaaaatggtgacatggagtccgcagtggaggtgttggaggcagtattc
actagtccaaacagcacaaaccccagtatgtccttcgtcttcagaaagatcttggaagat
gacaatgacaaagccttagacaagttgagtgctatggcagagcggctagccaaccacttt
ggctgctacagaccagcttcagacctcttcctccagctgctggatatggacaaagttgaa
gatgccaagttcatgctagctcgttgtaacgccttggcagaacagaaggaggtgctggtg
tcctacttgtctcagaaggctcagcgtccaggacaggtgggcaagatcaaggccctgctg
agcttgattccagacttcactgagaaggaggtggtgtacccgtacttgatgaaatgtcat
gtcctggataaggacttattgtcagccaaggctctgcaagagcagatgcagaaggggggg
acagtcatagacgagctgtcactcaaacggctggctgcgctttaccgcaatgcaggagag
actgtgcccttcgtggagcccccggagtcctttaagttttatgcagacaagctgaaagag
agagcggcaaaagccaagacaacaattgaggcataa
DBGET
integrated database retrieval system
