Etheostoma cragini (Arkansas darter): 117960549
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Entry
117960549 CDS
T07493
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117960549
Membrane trafficking [BR:
ecra04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117960549
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
117960549
NCBI-ProteinID:
XP_034754433
LinkDB
All DBs
Position
1:complement(31160788..31229219)
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AA seq
1978 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDCSKPLDQEIHFDDVCHKTAKPKAPITDVAVVIRSTGEEVP
PGFTCVEETPTGHSADLNNGGLMAPQIFVCYRRGRDKPPLTDLGVLYEWKERLKQGCHLI
QTTPSGRPANISGNSSQRIYITYRRAPESQPHSALAVTDICIIIPSKGETPPHTFCKVEK
NLNSSMWGSSVYLCYKKSVAKTNTIAYKAGLFSRYPEEDYESFPLPESVPLFCLPMGATI
ECWPANTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPFPQECLTDQQLSQLGLLNPDPPK
PSSNCKGTAASSATNSTTTTPRLVFTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHAL
PIEKHISHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSMLLQNLGPE
NAVTLLVFAVTEHKILVHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAP
CPFIVGVDSRYFDLYDPPPDVSCVDLDTNTIFHNEDKRALTWKILPKKACKNLMNVLSNL
YQQLVDGQQRPDGLMELSMTESSELSCGKSLHALELEIQEAFLRFMAAILKGYRSFLRPI
TQAPSEKATDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAF
FDDCVEKLYSSERSADKGGKVDSDRPEEARLIEIDESQRSEHTVFITPPELPPLPEGEEY
PLCYRYDGFPVLSLDLFDPVDGLRTPSSRLAARHSCPTSPAPMFRRTKQEIKTAQKIAKK
YSSIPQMWSKCLLRHCYGLWFICLPAYVKVCHSKVRALRTAYDVLRKMQAKKLQPPDEVC
YRVLMQLCGQYGQPVLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGYFLWM
KLRNVVLGVAQFKQVLRRHAPITQSPLSDGSDLDALSHGSLDSSADTNLAEQGPYAKVDP
TDDRSSTVGREGGGVGARAPVAHSHWGGSELRKATLHPGDQSDLGYNSLSKEEVRRGDPS
AQDTAPDKDDKKESDCSSLSETESAKGSKDCLPQLDMELHSSFQPRGIVRSSCPYNDSSC
KPKSSTSEGHVAGLLFTSSLEEIGEVHANSLLRRHKSALEEVVGSGSSGTTVLGLGMSRG
ETDPDKIAGHLGADVKILSCANFTKSRRPRSLALGGLEGARAARCCDHREEEEEMEGQDS
SDEDRSNTEAIFDLEDIDLDKPATGAGFSSHKSNKYNKKPVERSVSYSGMSSVKRTDIQT
GYDPLSLLAAESQSEQPTEDPDGDEDSTPSARRDLAREIELYMNHMGSPLSSRAPSLDLQ
DPASPLLFLHPSSLSAPRRASLPYSSPFRTAGVPRSRTFHPPSPSQPIARQRLLSSPSCR
SSSTTPSASPRPSPYRERTDRMSLASPSSSSFALDTLLTPTLDVFKTSVFSAGKGVAEKA
SRWYSRLATYTTPTKDGHSDRVSVSSLGVGDPDRSSLRDEEDCGQSEGSVISPQRNVPAG
PRRSPRRSPSAGSSLGKPTSLPPGCVLSPPGFPPPDKSDLGSSRYTSNTSIFNNYAMELL
ISSCSRCKTCDCLVYDEEIMAGWTADDSNLNTTCPFCGNPFLPFLNVEIRDMRGPGRLFL
KGSPSVDEAMTSSYSASTGLDTGTSTLSTPCPTTAVFPPSPGIAVQECSGSEWARSTRAQ
GINIPSERRKGALSPGAPMARSVSAFGPLDEASRPNRCVPTSGSLPSRLNETTEPLSMDW
RLHNPEPVTVPYLSPLVLWKELESLLENEGDPVITEADMVDHHPIIYWNLVWYFRRLDLP
SNLPGLMLTSDHCNRDSQVPRPWMSEDSKHVLIQILWDNLKLHQDSIQPLYILWNTYNVG
YPLSRPAPEEEKPFSDELLQSVVKSIQRNDVGRPMAQLLQLLAQALGVKRQRSLYRDVLF
LSLVALGKDNIDIDAFDREYKLAYDRLVPSLVKLTHNCDRPPSTGVMECRRTFGEPYL
NT seq
5937 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaaaggccctcgtgtagccgactactttgtggtggccggtctgacggac
tgctccaagccgttggaccaggaaatccactttgacgacgtctgccacaagacggccaag
ccgaaggcgcccatcacggatgtggcggtggtgatccgctcgacaggcgaggaggtgccg
ccagggttcacctgcgtagaggaaacaccaacaggccattcagctgatcttaacaacggc
ggtctcatggcaccccagatcttcgtgtgctacaggagaggtcgagacaagccgccactc
actgacttgggcgtgctgtatgagtggaaggagcggctgaagcagggctgtcacctcatc
cagaccacaccctccggtcgtccagccaacatcagcggcaattcctcccagcgcatctac
atcacctaccgacgggcacctgagagccagccgcactctgccctcgccgtcactgacatc
tgcatcatcatcccgagcaagggcgagactccccctcacaccttctgcaaggtggagaag
aatctcaacagcagcatgtggggctcttcggtctacctgtgttacaagaagtctgtggcc
aaaaccaacacaatagcctacaaagcaggtttattcagcagatatccagaggaggactat
gagtcattcccactaccagaatctgtcccactcttctgccttcccatgggggccacaatc
gagtgctggccagctaacaccaaatactccctacctgttttctccacctttgtcctcacc
ggagcctctggagagaaggtctacggtgctgccattcagttctatgagcccttcccgcag
gagtgtctgactgatcagcagttatcccagctaggtctcctgaaccccgatccacccaaa
ccctcttccaactgtaaggggacagccgccagcagtgccactaacagcaccaccacaacc
ccacgcttggtcttcaccaacaagtgtatctgtctgctttctcactggcccttctttgac
gcattccgcaagttcctcacattcctctatcgctactctatctccggccctcacgctctg
cccatcgagaagcacatctctcattttatgcacaaagttcccttcccttcctctcagagg
cctcgcattctggtgcagctttcccctcatgatagcctgatgttgagccagccagtgtct
tctcctttaccgctcagtggtggtcggttttccatgctgctccagaatctcggaccagag
aacgccgtcaccttgctggtgtttgccgtcaccgaacacaagatcctggtccactcgcta
cgacccgccgtactgaccagcgttactgaagctctggtgtctatgatcttcccgttccac
tggccgtgcccgtatattcctctttgccccctggcgttggctgacgtgttgagtgccccc
tgtccattcattgtaggagtggactcccgctactttgatctttatgaccccccaccagac
gtgagctgcgtggacctggacacaaacaccatcttccacaatgaagataagcgagccctc
acatggaagatcctgccaaagaaagcctgtaaaaacctgatgaatgtgctgagcaatctt
taccagcagctggtcgatggtcagcagcggcctgatgggctgatggagctcagcatgact
gaatcgtcagagctgagctgtgggaagagcctccacgccctggagctggagatccaggaa
gccttcctgcgcttcatggcagctattttgaaaggttaccgctcgttcttacgacccatc
acccaggccccctctgagaaagccacagacgccagttcgctctttgacttgcaagggttc
ttgaaaagccgtgatcgctcacatcagaagttctactcgctgatgaccaaaacccagatg
ttcatccgctttatagaggaatgctccttcgtcagcgacaaagatgccagtctggcgttc
ttcgacgattgtgtggaaaaactctacagttcagagcggagtgcagacaaaggaggcaag
gtggacagtgacaggccggaggaggccaggctgatagagattgatgaatctcagcgcagt
gagcacacagtcttcatcacacctccagagctgcctcctctgcctgagggggaggaatat
ccactctgctacaggtacgatggattcccagtgttaagtcttgacctgtttgaccccgtg
gacggcctgcggaccccctcctcccgcctcgctgcccggcacagctgtcccacaagccct
gcccccatgtttagacgcaccaagcaggagatcaaaacagcccagaagatagcgaagaag
tactcgtccatcccccagatgtggtccaagtgcctgctccgtcactgctacggcctgtgg
ttcatctgtctgccagcatacgtgaaggtgtgtcactccaaggtgcgggcgcttcgcaca
gcctacgacgtcctcaggaagatgcaggcaaagaaactgcagccccccgacgaggtctgc
taccgggtgctgatgcagctgtgtggacagtatggccaacccgtcctggccgtcagggtc
ctctttgagatgaagaaggccggagtccaccccaatgccatcacctacggctactacaac
aaggcggtgttggagagcacgtggccctccagcaccagaggaggttacttcctgtggatg
aagctgagaaatgtcgtcctgggcgtggcacagttcaaacaggtgctacggcgacacgct
cccatcacgcagagccctctgtcagatggcagtgacctggacgctctgagtcacggcagc
ctggatagctctgccgacactaacctggccgagcagggcccctacgccaaagtagacccc
actgacgatagatctagcacagtcggccgtgagggcggcggcgtgggcgccagggccccg
gtggcccactcacactgggggggctctgagctcagaaaagccaccctccacccaggggat
caatcagatttgggttataactcgctgtccaaagaggaggttcggcgaggagaccccagt
gctcaggacaccgcccccgacaaagatgacaagaaggagagcgactgcagctccttgtca
gagacagagagtgccaaggggagtaaagactgcctccctcagctggacatggagctccat
tcctccttccaaccccgcggtattgttcgcagcagctgtccttataacgattcatcctgt
aaacccaagagctccaccagcgaagggcacgttgcaggtctcctcttcacttcttccctg
gaggagatcggtgaggtccatgccaacagtttgctcaggagacataagagtgctctggag
gaggtggtgggcagcggcagcagtggcaccactgtccttggcctgggtatgagccggggt
gaaaccgacccagataagattgcgggacacctgggcgcggatgtcaaaattctttcttgt
gccaactttactaaaagtaggaggcctcgttcgctggctctgggcgggttagagggggca
cgtgctgccagatgttgtgaccacagggaggaggaagaggagatggaggggcaggactct
agtgatgaggacagaagtaatacagaggccatttttgatttggaggacatagatttagac
aagcctgccacaggtgctggctttagttcccacaaatccaacaaatataataagaaacct
gttgagcgcagcgtcagctacagtggaatgagctcggtgaagcgcacagacatacagacg
ggctacgaccctctatccctgctggctgcagagtcacagtcagagcagccgactgaggac
ccggacggggacgaggacagcacaccaagcgcccgtagagacctggctagagagatcgag
ctctacatgaaccacatgggcagcccgctgagcagccgtgcacccagtctagacctgcag
gacccggccagccctctcctcttcctccacccttcctctctctcagccccccgcagagcc
agcctgccctacagctcccccttcaggaccgccggagtaccccgctctcgcacgttccac
ccgccctctccctcccagcccatcgcacgccagcgtctattgtcatcaccctcgtgtcgc
agctcaagcaccacccccagcgccagccctagacccagcccttacagggagagaacagac
aggatgagcctggcgtcgccttcctcatcctctttcgctctggacactctgctcacacca
acgcttgatgtgttcaagaccagcgtgttctcggctgggaagggcgtggcagagaaggca
agccgctggtactcccgtctcgccacatacaccacgcctacaaaggacggtcacagtgac
cgtgtgagtgtgtcctccctcggtgttggagatcctgaccgctcctccctgcgtgatgag
gaggactgtgggcagtccgagggctccgtgatctctccacagaggaatgtccctgcaggg
ccccgcaggagccccagacgcagcccctctgcaggctccagccttgggaagcccacatct
ctgccccctggatgcgtcctctcacctcccggcttccctccgccagacaagtcggacctc
ggctcttcacgctacaccagcaacaccagcatcttcaacaactacgccatggagctgctg
atctccagctgttctcgctgtaagacgtgcgactgcctcgtgtacgatgaggagatcatg
gctggctggacagcagacgactccaacctgaacaccacctgccccttctgtggaaacccc
ttcctgcccttcctcaatgtggagatcagggacatgcgaggacccggcaggcttttccta
aaaggcagcccttcggtggacgaggcaatgacctcatcatactctgcctccacaggtttg
gacacggggacgtccaccctgtccaccccctgtcctacaacagctgtcttccctccctcc
cctgggatagctgtccaagagtgctcagggagtgaatgggctcgatcaaccagagctcaa
ggcatcaacatcccctcggagcgcaggaagggggcgctgtcccccggagcgcccatggcc
cgcagcgtcagcgcctttggtcctctggacgaagcatcccgacccaaccgctgtgtgccc
acatcaggcagcctgcccagccgtctcaatgagaccacggagccgctgagcatggattgg
cggctccacaaccctgagccggtgacggttccctacctgagcccgctggtgctgtggaag
gagctggagagtctgctggaaaacgagggcgaccctgtgatcacagaggccgacatggtg
gaccatcatcccatcatctactggaacctggtctggtatttcagacggctggacctgccc
agcaacctccccggtctcatgctcacatctgaccactgcaacagagattcccaggtccct
cgtccctggatgtcggaggacagtaaacacgtgttgatccagatcctgtgggacaacctc
aagctgcatcaggactcgatccagcctctctacatcctgtggaacacatacaatgtgggt
taccctctgtcccggccggccccggaggaggagaagccgttcagcgatgagttgctgcag
agcgtggtgaagagcatccagaggaacgacgtcggtcggccgatggctcagctgctgcag
ctgctggctcaggcgctcggggtcaaaaggcagaggagtttgtacagagacgtcctcttc
ctctctctggtggctctgggaaaagataacattgatattgacgccttcgatcgtgagtac
aagttggcgtacgaccgcctggtgccgagtctggtgaagctgactcataactgtgaccgt
ccgcccagcaccggggtcatggagtgccgcaggacgtttggggagccttacctgtga
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