Etheostoma cragini (Arkansas darter): 117960629
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Entry
117960629 CDS
T07493
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X1
KO
K24223
cilia- and flagella-associated protein 43
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ecra03037
]
117960629 (cfap43)
Cilium and associated proteins [BR:
ecra03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
117960629 (cfap43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC_Cfap43
Beta-prop_THOC3
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
Beta-prop_ACSF4
Beta-prop_WDR3_2nd
Beta-prop_VPS8
Beta-prop_HPS5
CFAP43_N
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
117960629
NCBI-ProteinID:
XP_034754526
LinkDB
All DBs
Position
17:complement(9325000..9343415)
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AA seq
1657 aa
AA seq
DB search
MDEIGSLEVRWVQGFTNKSIEFVDNKTVCYTCGSHICFLNLETTKRSVLQSPGRGIGVLT
ANGNNKTFAFSEEKLSPSIFVYNFPELQLNNELKGTAQLDYTSLTLSDGGPYLGCCSSLP
DHTITVWNWENAEPICTQPQAGQNVISLVFNPLNWLQLCALGTTSLTVWAIEKSASFHVL
KPSVIELPATDGSFVETLVPTSHTVRDKLPYFGLEMPPSAISGLKGDKAESILTKLCTKA
RLTPTAICWTATSELYVGCAEGFLLLVDPESLSVSVLFNPTTVDAIPVLRQSNFQGLTLY
KNGLIVVGKESAVHCLQIKASQIDVTQTWQLERPVTTVMYSPDYETLLLSSNTGQIYMLN
PTQSDKIVKVLDVLSGNFVAAALSLIDKDICVSVRDSGELQLWSPDGICVGSLSLQAELT
SLACCPIAKYAAVGTASGNVLFIDLNKQQQPRLVHQVHLYQTPVDHLLFDQEGHYLLTGA
ADSHIYFLDAKPSKMFSVIGYTVVPGPILSLSTQCIRDCEQVKVLAVCTGHKGKRHDGSL
LTVLSLPARDLPDCVDLHGCLSTHILKVSTYKVDHPLKSCVLGVSEVFAFCHKKKTLLRF
QLPQDTDGLSSHQVVQLKPEQEVRGHPLGPASPLLSPHQLWLASVGGDGLLCIRETASME
RYIELQCHSCRLGGVRSVSFSADSQTLFTAGLRDGSLVCTDLRIKGVKSGKVNEANKYSQ
SVDHFFKNIFNAENPVLIALPEWRQGSPAGTEKTEENEVSGEEETVDVTEQDDNYNSLLC
VPLSHPTWLERRREAVIKEENEQYLETKKYLRKTVKELRDTIQEMMRENETLPDIERLEQ
QKFNLDVEEQRRLEDMVQQEVSRVQNEVEWEILAKCYLRDVLKREFWDSMKVKGKAVKAF
HSEHEVKNYPLKERTEKEMEDLRRVQNMRTFEIAACTQSSLKKSSNTTSAKKEEEREEGH
KADTAALTGSFSAQLGYSNPWIYDQFSLQTTEQRIAQTILLQDVIYRIKTAFNTDFEAVH
RQKVQELNRVRDRNRHIRKILLELDMSEDLWEPSLTVSEQPEKLLTVDDSEIKAEKYLTP
EQKKEEERKKLEEQKRAAAKGDNVRDRALDDMMDGVLEVKKEDILRMEIPPPEFVLTKPD
IHWSEEEKKVYKEYEKKTNDLSEEKEKYKKSMETEIKKLQASTREATERFDETLTKLFEK
KVKCEMAIYQEELKITYLVYTVLIEDEMRCRELELKLKLEKTLAYKDEIGEEVKRHEEEV
ELFHETYDSIVAEDKVLDKEFRKEFFDVPSHMVDQLYKLFKRRPRVQKMRTQTDNNSNPF
KDQRLCGSLAPDALGKILKAMEELDAPENIPEGLNPSIWERFCLVRRTKVESEKKVKVKA
LTLAEMHAFLQTTRDEDNAAQQEIKNLSDGLERLHKDKNRFLTDIMVQVLLKQGQVEMST
TDLTADYTDAVLHHRSVVEDLNRTIRTLGEQKIASMVECKDFRKGIIQLQWEHRMMGMQI
KDLNNKARDIQMLRLSEEQQDYLNKTDRDSRVSKQVSILEKTIAFQEKTHLQNVQHRIKK
IEQLNRQAAIKAEKNAIVEEQLPNMQVTVAERRHIYKAIASEENQAAKTEEHYREIVQRK
NLEDFAKQLAEDLAFLWAEVDRLRMKNFPSLDQLKHN
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaattggaagtttagaagtcaggtgggtacaaggttttacaaacaagagtatc
gagtttgtcgacaataaaacagtatgctacacatgtgggtctcatatctgtttcctcaac
ctggagacaacaaagcgaagtgtgcttcagagtcctggcagaggcattggtgtattgaca
gccaatggcaacaacaagacttttgctttctccgaggaaaagctatccccatctatattt
gtgtacaatttccctgagcttcaattgaataatgaactaaaaggaacagcacaactggac
tacacatcgctgacattaagtgatggtggtccttatttaggctgttgctcctctcttcca
gaccacaccataacagtgtggaactgggaaaatgctgagccaatttgtactcaaccacaa
gctgggcagaatgtcatttctttggtcttcaaccctctgaattggctccagctctgtgct
ttgggcactacatccctcactgtctgggctattgagaagagtgccagctttcatgtcctg
aaaccaagtgtgatagagcttccagcaactgatggttcctttgttgagacattggtgccc
acctctcatactgtcagggacaaactgccttattttggtcttgagatgcctccatcagcc
atctcaggactcaagggagacaaggcagaaagcattttgactaaactctgcaccaaagcc
agactaactcctactgccatctgctggacagccacatcagagctatatgtgggctgtgct
gaaggcttcctgctacttgttgacccagagagcctctctgtctctgtcctcttcaaccca
acaactgttgatgccatccctgtactcagacagagcaactttcaaggcttaaccctttac
aagaatggattgattgttgtaggaaaggagagtgcggtgcactgtctgcaaatcaaagcg
tctcagattgacgtcacacaaacatggcaattagaaagacctgtcacaactgtgatgtac
tcccctgactatgaaacgttacttttatcttctaatacagggcagatctatatgttgaac
ccgacccagtcagacaaaattgtgaaggtcctggatgttctcagcggcaactttgtggca
gcagctttgtcactcattgacaaggacatttgtgtgtcagtgagagattctggagaactg
cagctgtggtccccagatggcatttgcgttggttccctgtctcttcaagctgagttgaca
agtctggcctgctgtcctattgcaaaatatgcagctgttggaacagcttcaggaaatgtc
ctctttattgacctgaacaagcagcagcagcctcgcctggtgcaccaggttcatctctac
caaacacctgtggatcacctactatttgatcaagaggggcactaccttctcaccggtgcc
gcagattcccatatatattttctagatgcaaagccatcaaagatgttttcagtcatagga
tacacagttgttcctggacccattttgtccctttccactcagtgcatcagggactgtgag
caggtgaaagttcttgcggtgtgcactggacacaagggcaaacgtcacgatggtagcctg
ctcacagttctctctctgcctgcgagggaccttccagattgtgtagacctacatggttgt
ctgtctacacacatcctcaaagtgtctacatacaaagtggatcatccacttaaatcctgt
gttctgggagtcagcgaggtctttgctttctgccacaagaagaaaactcttctgcgattt
caacttccccaggacaccgacggtctttccagtcatcaggtggtccagctcaaaccagag
caggaagtgaggggtcaccctctgggccctgcctctccacttttgtctcctcatcagtta
tggctggcttctgtgggcggagatggcctcctttgcatccgagaaactgcttccatggag
cgttacattgaactgcaatgtcattcatgccgtctgggaggagtacggagcgtgtccttc
tctgcagacagccagacactcttcactgctggcttaagagatggctcccttgtgtgtact
gatctcagaattaaaggtgtgaagtctggtaaggtaaatgaagccaacaagtacagtcag
tctgtggatcatttctttaagaacatattcaatgccgagaatcccgtcctcattgccttg
cctgagtggcgccaaggatctcctgctggcacagaaaaaacagaggaaaatgaggtcagt
ggtgaagaggagactgtggatgtgacagagcaggatgacaattataacagcctgctgtgt
gttccactttcacaccccacctggctggaaagaaggagagaggcagttataaaagaagag
aatgagcaatatttggagacaaagaaatacctgaggaaaaccgtcaaagagttacgtgac
actatccaggaaatgatgcgtgaaaatgagaccctcccagatatcgagcgtcttgaacaa
cagaagttcaacctagatgttgaggaacagaggagattggaggacatggtgcagcaggaa
gtttctcgggtgcaaaatgaagtggaatgggagattttagcaaaatgttaccttcgtgat
gtcctaaaaagagaattctgggattctatgaaggtcaaaggcaaggccgtcaaggccttt
cactcagaacatgaggtgaagaactaccctctgaaagagcggacggagaaagagatggag
gaccttcgcagggttcagaatatgaggacgtttgaaatagctgcttgcacccagagcagc
ctaaagaaaagttccaacacaaccagtgcaaagaaggaagaggagagggaggaaggccac
aaggcagacactgctgctttaacgggaagtttctctgctcagttaggatattcaaatcct
tggatctacgatcagttcagcctgcaaaccacagaacagaggatcgctcagacaattctg
ctacaggatgtgatttatcgcatcaagacagctttcaacactgactttgaggccgtgcac
agacagaaggtgcaggagctgaaccgtgtgagggacaggaacagacacatcaggaagatc
ttgctggagctggacatgagcgaggacctgtgggagcccagcctgaccgtcagcgagcag
ccagagaagctgctcactgtggacgactctgagataaaagcagaaaagtacctcacccca
gaacagaaaaaggaggaagagaggaagaagttggaggagcaaaaacgtgcagctgccaaa
ggtgataatgtccgagacagggctcttgatgacatgatggatggagtgcttgaagtgaaa
aaagaggacattttgagaatggaaatacctccgcctgagtttgttttgaccaaacctgac
attcactggagtgaagaggagaaaaaagtttataaagagtatgaaaagaaaaccaatgac
ctgagtgaggagaaggagaaatacaaaaagtcaatggaaactgaaattaaaaaactacag
gcgtccaccagggaagcaaccgaaaggtttgatgaaactttgacaaagctgtttgagaag
aaagtgaaatgtgaaatggcaatttatcaggaagaactcaagattacttatcttgtatat
acagtcctcatagaagacgagatgagatgtcgagagctggagctcaagctcaaacttgaa
aaaaccttggcatacaaggatgaaattggggaggaggtgaagagacacgaagaagaagta
gaattgtttcacgagacctatgacagcattgtagctgaggacaaagttcttgacaaagaa
ttcaggaaagagttctttgatgtaccaagccacatggttgatcaactatataagttattc
aagcgtagacccagggttcaaaagatgaggacccagaccgacaacaactccaacccgttt
aaagaccagcgtttgtgcggatctctggctcctgatgcactcggcaaaatactgaaggcc
atggaggagctggatgcaccggagaatataccagaaggcttgaacccatcaatctgggag
aggttttgtcttgtccgcagaacaaaagtagagagtgagaaaaaggtaaaagtaaaagct
ttgacccttgctgagatgcatgcgttccttcagacgacgagagatgaggataacgcagca
caacaggaaattaaaaatctctcagacggacttgaaaggctgcataaggacaagaaccgt
ttcctgacggatatcatggtccaggtcctgctcaaacagggccaggtggagatgtctacc
acagacctgacggctgactacaccgacgctgttcttcaccacaggagtgtggtggaggac
ctcaacagaaccatcaggacacttggagagcagaagatagcttccatggtggagtgcaaa
gacttccggaagggcatcatccagctgcagtgggagcacaggatgatggggatgcagatc
aaggacctcaacaacaaggcgagggacatccagatgttacgactctctgaggagcaacaa
gattacctcaacaagacagatagagacagtcgtgtgtccaagcaagtttccattctggag
aaaactatagctttccaggaaaagactcatctacagaatgtgcagcatcgcattaaaaag
atcgaacagctcaacaggcaggcagcaatcaaagctgagaagaacgcaatcgtagaagag
cagctacctaatatgcaggtgactgtggcagagaggagacacatctataaagcaatagct
tcagaggaaaaccaagcagctaaaactgaagagcactaccgggaaatcgttcagaggaag
aacttggaggactttgccaaacagctggcggaggatctggctttcctctgggccgaagtt
gaccgtctgaggatgaaaaactttccttcacttgatcagctgaaacacaactga
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integrated database retrieval system
