Etheostoma cragini (Arkansas darter): 117960659
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Entry
117960659 CDS
T07493
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04080
Neuroactive ligand-receptor interaction
ecra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117960659
04082 Neuroactive ligand signaling
117960659
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117960659
Ion channels [BR:
ecra04040
]
Ligand-gated channels
GABA-A
117960659
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117960659
NCBI-ProteinID:
XP_034754589
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Position
17:complement(22636036..22698626)
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AA seq
459 aa
AA seq
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MSFSVSGRTVFTILLISRLLESSMLNAEVKEGEILPPTIQRLMKGYNKYLRPFFDNGPVT
VGMSLDIASIDTISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTFI
VDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESWG
YNVNDVMFYWTRGNESVSGLDTLQLAQYTVEDHYTSVSEAVYETGNYPKLVFHFELKRSI
LYFILETYVPSSLLVVLSWVSFWISLSSVPARICIGVTTVLTMTTLMMGARTSLPNANCF
IKAIDVYLGICFSFIFGALIEYAVAHFCTLTHMDSHMVMYSHHMHDFDDEMNGIITTISN
HNRAKRRKEAAATPAPSPASLELTVSPSSPSGSEPRPEASPPKHTHWCLTALATVRKVLR
SLTCCHIENPHHIDNYSRVTFPLSFVMVNLLYWIYYLYF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctcagtatctggaaggaccgtgttcactatcctcctcatcagcaggttgtta
gagagctcgatgctcaacgcagaagtgaaggaaggagagattctacctcctaccattcag
aggctgatgaaaggatacaacaagtacctaaggcctttctttgacaatggtcctgtaaca
gtgggtatgagcctggatatcgccagcattgacaccatctcagagatcaacatggactac
accgccactattttcctccgccagcgctggacggacgagcgcttggtgtttgagggcaac
aagagcctgagcctcgacgggcggctagtggagctgctctgggtccctgacacctttatc
gttgactccaagaagtccttcctccatgacatcaccgtggagaaccggctgattcgcatc
ttccccaacgggaccgtcctttacgcgctgaggattaccaccaccgtggcttgcaacatg
gatctgaccaagtatcccatggacaagcagacctgcacgctccaactggaaagctggggt
tacaacgtcaacgatgtcatgttctactggaccagagggaatgagtccgtcagtggtttg
gacaccctacagctggctcagtacacagtagaggaccactacacatctgtctcagaggcc
gtttatgaaactggcaattacccaaagctagtcttccactttgagctgaagcggagcatt
ctgtacttcatcctcgagacttacgtcccctccagcctgctggttgtcctctcatgggtt
tccttctggatttcgctgtcctctgttccagcacgtatttgtataggagtgaccaccgtg
ctgaccatgaccactctgatgatgggggcccggacgtcactgcccaacgccaactgcttc
atcaaggccattgatgtgtacttgggaatctgcttcagcttcatctttggagcgctcatt
gagtacgccgtggcccacttctgcaccctcactcacatggactcccacatggtcatgtac
tcccaccacatgcacgactttgacgatgaaatgaacggcatcatcaccaccatctccaat
cacaacagggccaagagacgcaaggaggctgctgcaaccccggccccgagtcctgcctcc
ctagaactcactgtcagcccgtcaagcccctcgggcagcgagcctaggcccgaggcatcg
cccccgaagcacacacactggtgcctcaccgctctggccaccgtccgcaaagtgctccgc
tccttaacttgctgtcacatagagaacccccaccacatagacaactactccagagtcacc
ttccccctttcttttgtgatggttaacctgctctactggatatattatctgtacttttag
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