Etheostoma cragini (Arkansas darter): 117960688
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Entry
117960688 CDS
T07493
Symbol
spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117960688 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecra04812
]
117960688 (spast)
Enzymes [BR:
ecra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
117960688 (spast)
Membrane trafficking [BR:
ecra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117960688 (spast)
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
117960688 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_22
MIT
AAA_5
TIP49
AAA_16
Mg_chelatase
IstB_IS21
AAA_14
NPHP3_N
nSTAND3
AAA_24
DUF815
AAA_2
DUF3549
AAA_33
AAA_19
Motif
Other DBs
NCBI-GeneID:
117960688
NCBI-ProteinID:
XP_034754679
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All DBs
Position
17:16447932..16452305
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AA seq
473 aa
AA seq
DB search
MAGKSRDSGEVIKNYHKQAFEYVSKALRIDEDDTGEKEEAVQWYKKGISVLERGIEVEIT
GQAGEQYDRAKRLQDKMVTNLTMAKDRLALLEAAMANKRRNDPQKTPNHALTQPRPVPKS
QPAVRGVSTNIRPSTVRTPPRPTDQKVTPRMAKTQNGKLAAMKQLPKRDMKNFKNVDSKL
ANLIMNEIVDSGASVFFKDIAGQDLAKQALQEIVILPALRPELFTGLRSPARGLLLFGPP
GNGKTMLAKAVAAESKATFFNISAATLTSKYVGEGEKLVRALFAVARELQPSVIFIDEVD
SLLCERREGEHEASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDEAVLRRFAKRI
YVALPDGETRVTLLKNLLGKHGNPLSKNELSLLAKKSEGYSGSDLTSLAKDAALGPIREL
GPDQVRSMAASEVRNIKMKDFEDSLKRIKPSVSPATLQMYTKWNKDFGDTTAI
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcagggaaaagcagagacagcggcgaagttattaaaaactaccataaacaggccttc
gagtatgtatcgaaggcattacggatcgacgaagatgatacaggagagaaagaggaggct
gtgcagtggtacaagaaggggatttctgtgcttgaaaggggtattgaagtagagatcacg
gggcaagcaggagagcaatatgacagagcaaagagacttcaagataaaatggtcaccaat
ctcaccatggcaaaagatcgtctcgctctgttagaggcagcaatggcaaataaaaggagg
aatgatccccagaagacaccaaatcatgccctcacacaaccaaggcctgtgcctaaaagc
cagcctgcagtgcgaggtgtgtccactaacatccgaccctccaccgttagaaccccaccc
agacccactgatcaaaaggtgacgccacggatggcaaaaactcaaaatggaaaacttgca
gctatgaaacaactcccaaagagagatatgaaaaacttcaagaatgtggacagcaaattg
gccaacttgattatgaatgaaattgttgacagtggagcgtctgtattctttaaagacatt
gcgggacaggacctggccaagcaagcactccaagagattgtcatcctccctgccttaaga
ccagagctctttactggcctgagatctcctgcgcgtggtttacttttatttgggccgcct
ggaaatgggaaaaccatgctggccaaagcagtcgcagcagaatcaaaagctacattcttc
aacatcagcgctgccactttgacctctaaatatgtgggagagggcgagaagcttgtgcga
gcactgtttgcagttgccagagaattgcagccctctgtgatctttatcgatgaagtggac
agcttgctctgtgaaagaagggagggagaacacgaggcctcccgtcgactaaaaaccgag
ttcctcattgagtttgacggggtgcagtcaggaggggatgacagggtgctcgtaatggga
gcgaccaacaggcctcaggagctcgatgaagcagtactgaggcgttttgcaaaaaggatt
tatgtggcattgccggatggggagacgcgagtcacgctgctgaaaaaccttttgggaaag
cacgggaatccactgagcaaaaatgagctttcccttctcgcaaaaaagagtgaaggatat
tcaggaagtgatctcacgtcattagccaaagacgctgcgctcgggccgatcagagagttg
ggaccagatcaagtgcgaagtatggctgctagtgaggtgcgtaacatcaagatgaaagac
tttgaggattccttgaagcgcattaagcccagtgttagcccagcaactcttcagatgtat
accaaatggaacaaagatttcggagacacaacagctatttga
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