Etheostoma cragini (Arkansas darter): 117960713
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Entry
117960713 CDS
T07493
Symbol
lrit1a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
117960713 (lrit1a)
Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117960713 (lrit1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
fn3
LRR_5
LRR_14
C2-set_2
RNA_pol_Rpb1_2
Motif
Other DBs
NCBI-GeneID:
117960713
NCBI-ProteinID:
XP_034754716
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All DBs
Position
17:complement(10893382..10898274)
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AA seq
651 aa
AA seq
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MFLVLLMGLYVATGELLSTVSSCPSQCSCFYHNLSDGSKARSVICNDPEISLVPVGFPVD
TSKLRIEKTAMQRIPSEAFNYLSSLEFLWLSFNTLSALSPDSFRGLINLEELRLDGNALT
AFPWECLMDVPSLRLLDLHNNQLTSLPAESTTYIKNLTYLDLSSNSLLTLPAEVLSTWLA
AKPMQGPESSKMILGLHDNPWVCDCRLYDLIQFQKSPTLSVAFIDTRLRCSAPESVSGVL
FSDAELRRCQLPRIHTAVARVRSAVGNNVLLRCGTIGVPIPDLTWRKADGRLFNGTVQQE
TSKEGITWSILSVPAVSYRDSGKYICKATNYAGNAEAVISLVVSNSQKPEGNQTSNDKKA
KVKKPNPMGKAAYQEKLVARYVVPTSTPSSLPALDPGLPPGLGPDPGLASYSLADRATPG
PATSSNADALLDLEKTNLSNLAANTSSLQQDPDRVVRSVKVVGDTDNTIYLNWRAPKAKN
TTAFSVLYAVFGERDMRKINVGAGQNRVSIDGLVPRTKYIACVCVRGLIPKKEQCVIFST
DEAASATGTQRLINVIVITVACIIAVPLTVIVCCGALKRRIQKYWGKKSKDIQDSYVTFE
TLSPGTKAKGLEGEYLNRLNPEESNRLLSARSSLDSEATAKIEGQPNEYFC
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcgtcctgctcatggggctctacgtggccacaggtgaacttctttccacagtg
agctcgtgcccgtcgcagtgcagctgtttttaccacaacctgagtgatggatcaaaggcc
aggagcgtgatttgcaatgatcccgagatatctcttgtgcctgtcgggtttcctgttgac
acgtccaagctgcggattgagaagacagccatgcagcggataccaagcgaagccttcaac
tacctctccagtttggaattcctgtggttgtctttcaacacgctgtccgctttgagcccg
gacagtttccgaggactgattaacttggaagaacttcgtctggacgggaatgccctcacc
gcctttccctgggaatgtctcatggatgtgcccagtctcagacttcttgatttgcacaac
aaccagctcacctcgctgccagcggagtccaccacttacatcaagaacctcacctacctg
gatctgtccagcaacagcctgctgaccctgccggcagaggtactgtccacctggctggcg
gcgaaaccaatgcaagggccagagagctccaaaatgatacttggtctccatgacaaccct
tgggtgtgtgactgtcggctctatgacctgatccagttccagaagtctccgactctttca
gtggcattcattgacacaaggctccggtgttcagctccggagagtgtgtcaggcgtcttg
ttcagtgatgcagagctgcgccgctgtcagctcccacgtatccacacagctgtggcacga
gtccggagcgctgttggcaacaatgtgctgctccgctgtgggaccatcggagtcccaatc
ccagacttgacatggcgcaaggcggatgggcgactctttaatgggacagtccagcaggaa
acctcaaaggagggaatcacctggtccatcctcagtgtcccagctgtgtcctatcgggat
tcagggaaatacatttgcaaggccactaactatgcggggaacgctgaagctgtcatttct
cttgttgtctctaactctcaaaaaccagaagggaaccaaaccagcaatgacaagaaagcc
aaagtcaagaaacccaacccaatggggaaagctgcctaccaggagaaactggtggccaga
tatgtggttccaacttccaccccttcatctctgcctgccctagatccaggcctacctcct
ggtcttggtcctgatcctggactagccagttacagtctggctgacagagccacccctggg
cctgccacctcctccaatgcagatgcactgttggatctggagaagactaatctaagcaac
ctggcggccaatacgtcatcgctgcagcaggacccagacagggtggtccgctctgtaaag
gtggtgggggacacagacaatacaatttatttaaactggagagcccctaaggccaagaac
acaaccgcatttagtgtgctgtatgctgtttttggagagagggacatgaggaagatcaat
gttggggcagggcagaaccgtgtatccattgatgggctggtgcccaggaccaagtacatt
gcctgtgtgtgtgtgaggggcctgatccccaagaaggagcagtgtgtcatattttccact
gatgaagcagccagtgccaccgggacccagaggctgattaatgtgattgtgatcacagtg
gcctgtatcatagctgtcccgctcactgtcatcgtgtgctgtggggctctgaagagacgc
attcagaagtactggggaaagaaatccaaggacatccaagattcatatgtgacctttgaa
acactgtcgcctggcacgaaggccaaagggctcgagggcgagtatttgaacagactgaac
ccagaggaatccaacaggctactgtcagcccgctccagcctggactctgaggccacagct
aagatagagggacagcctaacgagtacttctgctga
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